Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY31511 | Canola | nucleus | 81.35 | 94.05 |
| CDX96613 | Canola | nucleus | 90.35 | 93.36 |
| CDY29494 | Canola | nucleus | 81.67 | 92.7 |
| Bra025854.1-P | Field mustard | nucleus | 85.21 | 92.66 |
| CDY01347 | Canola | nucleus | 81.03 | 92.65 |
| CDY33658 | Canola | nucleus | 86.82 | 92.47 |
| Bra016444.1-P | Field mustard | nucleus | 93.57 | 92.38 |
| CDY31858 | Canola | nucleus | 80.71 | 91.94 |
| Bra012256.1-P | Field mustard | nucleus | 90.35 | 90.94 |
| AT1G76500.1 | Thale cress | nucleus | 69.77 | 71.85 |
| Solyc04g082810.2.1 | Tomato | cytosol, nucleus, peroxisome | 49.52 | 62.86 |
| KRH51551 | Soybean | plastid | 39.87 | 60.78 |
| PGSC0003DMT400025705 | Potato | plastid | 50.8 | 60.77 |
| GSMUA_Achr9P12320_001 | Banana | plastid | 47.27 | 52.31 |
| Zm00001d051620_P001 | Maize | plastid | 52.41 | 51.42 |
| TraesCS6A01G277700.1 | Wheat | plastid | 53.38 | 50.76 |
| Zm00001d017825_P001 | Maize | plastid | 52.73 | 50.62 |
| EES05630 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 53.38 | 50.61 |
| TraesCS6D01G258400.1 | Wheat | plastid | 53.05 | 50.15 |
| TraesCS6B01G306100.1 | Wheat | plastid | 53.05 | 50.15 |
| HORVU6Hr1G070090.1 | Barley | plastid | 53.38 | 50.15 |
| Os02t0713700-01 | Rice | cytosol, mitochondrion, nucleus, plastid | 53.38 | 49.4 |
| AT4G35390.1 | Thale cress | cytosol | 46.95 | 48.83 |
| VIT_18s0122g00590.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 49.2 | 48.42 |
| Zm00001d045928_P001 | Maize | nucleus | 46.62 | 47.39 |
| KXG19929 | Sorghum | nucleus | 47.59 | 46.54 |
| TraesCS7A01G225700.1 | Wheat | nucleus | 47.27 | 45.51 |
| Os06t0326900-01 | Rice | nucleus | 46.95 | 45.34 |
| HORVU7Hr1G046930.1 | Barley | cytosol, nucleus, peroxisome | 45.66 | 44.94 |
| AT2G42940.1 | Thale cress | plastid | 36.98 | 44.75 |
| TraesCS7B01G193900.1 | Wheat | cytosol, nucleus, peroxisome | 46.3 | 44.72 |
| AT3G60870.1 | Thale cress | nucleus | 37.94 | 44.53 |
| TraesCS7D01G228800.1 | Wheat | nucleus | 45.34 | 44.34 |
| AT4G17800.1 | Thale cress | cytosol | 40.19 | 42.81 |
| AT4G14465.1 | Thale cress | cytosol, nucleus, plastid | 38.59 | 42.7 |
| AT3G04570.1 | Thale cress | cytosol, mitochondrion, peroxisome | 42.77 | 42.22 |
| AT2G35270.1 | Thale cress | nucleus | 38.26 | 41.75 |
| AT2G45430.1 | Thale cress | nucleus | 41.16 | 40.38 |
| Zm00001d046696_P001 | Maize | cytosol, nucleus, peroxisome | 35.05 | 40.22 |
| AT3G55560.1 | Thale cress | plastid | 39.23 | 39.35 |
| EER88668 | Sorghum | cytosol | 34.08 | 39.26 |
| AT4G22810.1 | Thale cress | nucleus | 40.19 | 38.58 |
| TraesCS7B01G297300.1 | Wheat | cytosol | 35.05 | 37.33 |
| AT1G14490.2 | Thale cress | plastid | 26.69 | 36.89 |
| AT4G12050.1 | Thale cress | cytosol, nucleus, plastid | 40.19 | 36.87 |
| TraesCS7A01G395400.1 | Wheat | cytosol | 34.08 | 36.68 |
| AT5G49700.1 | Thale cress | nucleus | 31.19 | 35.14 |
| HORVU7Hr1G093230.2 | Barley | cytosol | 32.8 | 33.66 |
Protein Annotations
| Gene3D:3.30.1330.80 | MapMan:35.1 | EntrezGene:838683 | UniProt:A0A178WC24 | ProteinID:AAD30602.1 | EMBL:AB493469 |
| ProteinID:AEE30038.1 | EMBL:AF194974 | EMBL:AK228296 | InterPro:AT-hook_nuclear | ArrayExpress:AT1G20900 | EnsemblPlantsGene:AT1G20900 |
| RefSeq:AT1G20900 | TAIR:AT1G20900 | RefSeq:AT1G20900-TAIR-G | EnsemblPlants:AT1G20900.1 | TAIR:AT1G20900.1 | Unigene:At.11202 |
| Unigene:At.75184 | EMBL:BR000363 | EMBL:BT006460 | Symbol:ESC | GO:GO:0000003 | GO:GO:0002376 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003680 | GO:GO:0003690 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0006139 | GO:GO:0006325 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0006952 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009628 | GO:GO:0009640 |
| GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009987 | GO:GO:0010150 | GO:GO:0010228 | GO:GO:0016043 |
| GO:GO:0042393 | GO:GO:0043621 | GO:GO:0045087 | GO:GO:0045824 | InterPro:IPR005175 | RefSeq:NP_173514.1 |
| ProteinID:OAP15990.1 | PFAM:PF03479 | PIRSF:PIRSF016021 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0001054 | PO:PO:0007064 | PO:PO:0007098 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009025 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0020030 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | InterPro:PPC_dom | PFscan:PS51742 | PANTHER:PTHR31100 | PANTHER:PTHR31100:SF43 | UniProt:Q9S7C9 |
| SUPFAM:SSF117856 | UniParc:UPI000012A1A8 | SEG:seg | : | : | : |
Description
AHL27AT-hook motif nuclear-localized protein 27 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7C9]
Coordinates
chr1:+:7272526..7274072
Molecular Weight (calculated)
31844.0 Da
IEP (calculated)
7.269
GRAVY (calculated)
-0.592
Length
311 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGGYEQGGG ASRYFHNLFR PEIHHQQLQP QGGINLIDQH HHQHQQHQQQ QQPSDDSRES DHSNKDHHQQ GRPDSDPNTS SSAPGKRPRG RPPGSKNKAK
101: PPIIVTRDSP NALRSHVLEV SPGADIVESV STYARRRGRG VSVLGGNGTV SNVTLRQPVT PGNGGGVSGG GGVVTLHGRF EILSLTGTVL PPPAPPGAGG
201: LSIFLAGGQG QVVGGSVVAP LIASAPVILM AASFSNAVFE RLPIEEEEEE GGGGGGGGGG GPPQMQQAPS ASPPSGVTGQ GQLGGNVGGY GFSGDPHLLG
301: WGAGTPSRPP F
101: PPIIVTRDSP NALRSHVLEV SPGADIVESV STYARRRGRG VSVLGGNGTV SNVTLRQPVT PGNGGGVSGG GGVVTLHGRF EILSLTGTVL PPPAPPGAGG
201: LSIFLAGGQG QVVGGSVVAP LIASAPVILM AASFSNAVFE RLPIEEEEEE GGGGGGGGGG GPPQMQQAPS ASPPSGVTGQ GQLGGNVGGY GFSGDPHLLG
301: WGAGTPSRPP F
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.