Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY59041 | Canola | cytosol, nucleus, peroxisome | 92.98 | 92.66 |
| Bra017324.1-P | Field mustard | cytosol, nucleus, peroxisome | 92.98 | 92.66 |
| CDY72485 | Canola | nucleus | 88.42 | 92.31 |
| CDX79599 | Canola | cytosol, peroxisome, plastid | 87.37 | 91.21 |
| Bra005355.1-P | Field mustard | cytosol | 90.18 | 90.49 |
| CDX84222 | Canola | cytosol | 58.95 | 87.5 |
| CDY31677 | Canola | cytosol | 60.35 | 87.31 |
| Bra023007.1-P | Field mustard | cytosol, nucleus, peroxisome | 88.42 | 74.34 |
| AT4G17800.1 | Thale cress | cytosol | 68.42 | 66.78 |
| GSMUA_Achr8P14790_001 | Banana | plastid | 59.3 | 60.57 |
| AT2G42940.1 | Thale cress | plastid | 41.4 | 45.91 |
| AT3G60870.1 | Thale cress | nucleus | 40.35 | 43.4 |
| AT4G14465.1 | Thale cress | cytosol, nucleus, plastid | 42.11 | 42.7 |
| AT2G45430.1 | Thale cress | nucleus | 47.02 | 42.27 |
| AT4G35390.1 | Thale cress | cytosol | 44.21 | 42.14 |
| AT4G22810.1 | Thale cress | nucleus | 47.37 | 41.67 |
| AT3G04570.1 | Thale cress | cytosol, mitochondrion, peroxisome | 45.26 | 40.95 |
| AT1G76500.1 | Thale cress | nucleus | 42.46 | 40.07 |
| AT4G12050.1 | Thale cress | cytosol, nucleus, plastid | 46.32 | 38.94 |
| AT1G14490.2 | Thale cress | plastid | 30.53 | 38.67 |
| AT1G20900.1 | Thale cress | nucleus | 41.75 | 38.26 |
| AT3G55560.1 | Thale cress | plastid | 40.35 | 37.1 |
| AT5G49700.1 | Thale cress | nucleus | 34.39 | 35.51 |
Protein Annotations
| Gene3D:3.30.1330.80 | MapMan:35.1 | EntrezGene:818094 | ProteinID:AAC61811.1 | ProteinID:AEC09088.1 | ArrayExpress:AT2G35270 |
| EnsemblPlantsGene:AT2G35270 | RefSeq:AT2G35270 | TAIR:AT2G35270 | RefSeq:AT2G35270-TAIR-G | EnsemblPlants:AT2G35270.1 | TAIR:AT2G35270.1 |
| EMBL:BR000357 | Symbol:GIK | GO:GO:0000003 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003680 | GO:GO:0003700 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005654 | GO:GO:0006139 | GO:GO:0006351 | GO:GO:0006355 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009791 | GO:GO:0009908 | GO:GO:0009987 |
| GO:GO:0045892 | GO:GO:0048440 | GO:GO:0048653 | InterPro:IPR005175 | RefSeq:NP_181070.1 | UniProt:O82166 |
| PFAM:PF03479 | PO:PO:0000229 | PO:PO:0000230 | PO:PO:0009005 | PO:PO:0009025 | PO:PO:0009046 |
| InterPro:PPC_dom | PFscan:PS51742 | PANTHER:PTHR31100 | PANTHER:PTHR31100:SF21 | SUPFAM:SSF117856 | UniParc:UPI00000A14DC |
| SEG:seg | : | : | : | : | : |
Description
AHL21AT-hook motif nuclear-localized protein 21 [Source:UniProtKB/Swiss-Prot;Acc:O82166]
Coordinates
chr2:+:14856664..14858134
Molecular Weight (calculated)
29146.3 Da
IEP (calculated)
6.965
GRAVY (calculated)
-0.280
Length
285 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGLDLGTTS RYVHNVDGGG GGQFTTDNHH EDDGGAGGNH HHHHHNHNHH QGLDLIASND NSGLGGGGGG GSGDLVMRRP RGRPAGSKNK PKPPVIVTRE
101: SANTLRAHIL EVGSGCDVFE CISTYARRRQ RGICVLSGTG TVTNVSIRQP TAAGAVVTLR GTFEILSLSG SFLPPPAPPG ATSLTIFLAG AQGQVVGGNV
201: VGELMAAGPV MVMAASFTNV AYERLPLDEH EEHLQSGGGG GGGNMYSEAT GGGGGLPFFN LPMSMPQIGV ESWQGNHAGA GRAPF
101: SANTLRAHIL EVGSGCDVFE CISTYARRRQ RGICVLSGTG TVTNVSIRQP TAAGAVVTLR GTFEILSLSG SFLPPPAPPG ATSLTIFLAG AQGQVVGGNV
201: VGELMAAGPV MVMAASFTNV AYERLPLDEH EEHLQSGGGG GGGNMYSEAT GGGGGLPFFN LPMSMPQIGV ESWQGNHAGA GRAPF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.