Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX84222 | Canola | cytosol | 92.89 | 95.31 |
| Bra005355.1-P | Field mustard | cytosol | 99.49 | 69.01 |
| CDY72485 | Canola | nucleus | 84.26 | 60.81 |
| CDX79599 | Canola | cytosol, peroxisome, plastid | 83.76 | 60.44 |
| AT2G35270.1 | Thale cress | nucleus | 87.31 | 60.35 |
| CDY59041 | Canola | cytosol, nucleus, peroxisome | 85.79 | 59.09 |
| CDX90445 | Canola | plastid | 56.85 | 40.88 |
| CDX78802 | Canola | cytosol | 57.87 | 39.18 |
| CDY54780 | Canola | cytosol | 57.87 | 39.04 |
| GSMUA_Achr8P14790_001 | Banana | plastid | 53.3 | 37.63 |
| CDX79838 | Canola | plastid | 40.1 | 30.38 |
| CDY53650 | Canola | plastid | 40.1 | 30.38 |
| CDY14862 | Canola | plastid | 39.09 | 29.5 |
| CDY21124 | Canola | cytosol, endoplasmic reticulum, peroxisome | 42.13 | 28.82 |
| CDY70947 | Canola | plastid | 38.07 | 28.74 |
| CDY30003 | Canola | cytosol, nucleus, peroxisome, plastid | 42.13 | 28.72 |
| CDY37040 | Canola | nucleus | 42.13 | 26.95 |
| CDX98771 | Canola | nucleus | 43.15 | 26.81 |
| CDY64701 | Canola | nucleus | 42.13 | 26.69 |
| CDY41289 | Canola | nucleus | 42.64 | 26.67 |
| CDX82978 | Canola | cytosol, nucleus, plastid | 42.64 | 26.67 |
| CDY27387 | Canola | nucleus | 42.13 | 26.6 |
| CDY18931 | Canola | nucleus | 41.62 | 26.54 |
| CDX69136 | Canola | cytosol, nucleus, peroxisome | 40.61 | 26.49 |
| CDX74739 | Canola | nucleus | 41.62 | 26.45 |
| CDY49327 | Canola | cytosol, endoplasmic reticulum, nucleus | 42.13 | 26.43 |
| CDX75499 | Canola | cytosol, nucleus, peroxisome | 40.1 | 26.16 |
| CDX94128 | Canola | nucleus | 43.15 | 25.99 |
| CDY23160 | Canola | cytosol, nucleus, vacuole | 36.55 | 25.81 |
| CDY12779 | Canola | cytosol, nucleus, vacuole | 36.55 | 25.53 |
| CDY20404 | Canola | nucleus | 35.03 | 25.46 |
| CDX87591 | Canola | nucleus | 36.04 | 25.36 |
| CDY45983 | Canola | nucleus | 37.06 | 25.35 |
| CDX68095 | Canola | cytosol | 33.5 | 24.44 |
| CDY04391 | Canola | nucleus | 40.1 | 24.16 |
| CDX88286 | Canola | cytosol, endoplasmic reticulum, nucleus | 33.5 | 23.91 |
| CDX96613 | Canola | nucleus | 36.04 | 23.59 |
| CDY45266 | Canola | plastid | 24.37 | 23.41 |
| CDX83182 | Canola | cytosol | 28.93 | 23.27 |
| CDY21451 | Canola | cytosol | 28.93 | 23.27 |
| CDY68242 | Canola | plastid | 35.03 | 23.23 |
| CDY53687 | Canola | nucleus | 34.52 | 22.82 |
| CDX85952 | Canola | cytosol | 31.47 | 22.79 |
| CDY41211 | Canola | plastid | 34.01 | 22.71 |
| CDY60321 | Canola | plastid | 33.5 | 22.3 |
| CDY02949 | Canola | plastid | 34.01 | 21.82 |
| CDX76085 | Canola | plastid | 34.01 | 21.82 |
| CDY33658 | Canola | nucleus | 31.98 | 21.58 |
| CDY31511 | Canola | nucleus | 28.93 | 21.19 |
| CDY01347 | Canola | nucleus | 28.43 | 20.59 |
| CDY31858 | Canola | nucleus | 28.43 | 20.51 |
| CDY29494 | Canola | nucleus | 28.43 | 20.44 |
| CDY65376 | Canola | nucleus | 24.87 | 17.82 |
Protein Annotations
| EnsemblPlants:CDY31677 | EnsemblPlantsGene:GSBRNA2T00050289001 | InterPro:AT-hook_nuclear | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31100 |
| PANTHER:PTHR31100:SF21 | PFAM:PF03479 | PFscan:PS51742 | PIRSF:PIRSF016021 | ProteinID:CDY31677 | ProteinID:CDY31677.1 |
| SEG:seg | SUPFAM:SSF117856 | UniParc:UPI0004EEFAEA | UniProt:A0A078H2E2 | MapMan:35.1 | : |
Description
BnaA05g08700DBnaA05g08700D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H2E2]
Coordinates
chrLK032277:+:264790..265644
Molecular Weight (calculated)
20269.7 Da
IEP (calculated)
6.120
GRAVY (calculated)
-0.224
Length
197 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGLDLGTTS RYVHNVEGGG VGQFSTDNHH EDGGGDGGNH HHHHHNHNHH QGTVTNVSIR QPTAVGAVVT LRGTFEILSL SGSFLPPPAP PGATNLTILL
101: AGAQGQVVGG NVVGELMAAG PVMVMAASFT NVAYERLPLD EHEEQLQVQS GGANMYTEAT NGGGGGSLPF FSLPMSLPHM GVDNWPGNSS GAGRAPF
101: AGAQGQVVGG NVVGELMAAG PVMVMAASFT NVAYERLPLD EHEEQLQVQS GGANMYTEAT NGGGGGSLPF FSLPMSLPHM GVDNWPGNSS GAGRAPF
001: MAGLDLGTTS RYVHNVDGGG GGQFTTDNHH EDDGGAGGNH HHHHHNHNHH QGLDLIASND NSGLGGGGGG GSGDLVMRRP RGRPAGSKNK PKPPVIVTRE
101: SANTLRAHIL EVGSGCDVFE CISTYARRRQ RGICVLSGTG TVTNVSIRQP TAAGAVVTLR GTFEILSLSG SFLPPPAPPG ATSLTIFLAG AQGQVVGGNV
201: VGELMAAGPV MVMAASFTNV AYERLPLDEH EEHLQSGGGG GGGNMYSEAT GGGGGLPFFN LPMSMPQIGV ESWQGNHAGA GRAPF
101: SANTLRAHIL EVGSGCDVFE CISTYARRRQ RGICVLSGTG TVTNVSIRQP TAAGAVVTLR GTFEILSLSG SFLPPPAPPG ATSLTIFLAG AQGQVVGGNV
201: VGELMAAGPV MVMAASFTNV AYERLPLDEH EEHLQSGGGG GGGNMYSEAT GGGGGLPFFN LPMSMPQIGV ESWQGNHAGA GRAPF
Arabidopsis Description
AHL21AT-hook motif nuclear-localized protein 21 [Source:UniProtKB/Swiss-Prot;Acc:O82166]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.