Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 1
- cytosol 1
- mitochondrion 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040184.1-P | Field mustard | cytosol, nucleus, peroxisome | 99.36 | 99.36 |
| CDY64701 | Canola | nucleus | 96.82 | 97.75 |
| CDY21124 | Canola | cytosol, endoplasmic reticulum, peroxisome | 85.67 | 93.4 |
| AT3G04570.1 | Thale cress | cytosol, mitochondrion, peroxisome | 93.31 | 93.02 |
| CDY30003 | Canola | cytosol, nucleus, peroxisome, plastid | 84.71 | 92.04 |
| Solyc11g006090.1.1 | Tomato | nucleus | 55.73 | 68.63 |
| PGSC0003DMT400073795 | Potato | nucleus | 60.83 | 64.31 |
| VIT_14s0081g00670.t01 | Wine grape | mitochondrion | 58.92 | 63.57 |
| KRG92616 | Soybean | nucleus | 54.78 | 62.09 |
| KRH34163 | Soybean | nucleus | 55.1 | 61.79 |
| CDY12779 | Canola | cytosol, nucleus, vacuole | 53.82 | 59.93 |
| CDY23160 | Canola | cytosol, nucleus, vacuole | 53.18 | 59.86 |
| CDX79599 | Canola | cytosol, peroxisome, plastid | 41.72 | 47.99 |
| CDY72485 | Canola | nucleus | 41.72 | 47.99 |
| CDX90445 | Canola | plastid | 40.76 | 46.72 |
| CDY20404 | Canola | nucleus | 39.49 | 45.76 |
| CDX74739 | Canola | nucleus | 44.9 | 45.48 |
| CDX79838 | Canola | plastid | 37.58 | 45.38 |
| CDY53650 | Canola | plastid | 37.58 | 45.38 |
| CDX78802 | Canola | cytosol | 42.04 | 45.36 |
| CDY18931 | Canola | nucleus | 44.59 | 45.31 |
| CDY54780 | Canola | cytosol | 42.04 | 45.21 |
| CDY37040 | Canola | nucleus | 43.95 | 44.81 |
| CDY45983 | Canola | nucleus | 41.08 | 44.79 |
| CDY70947 | Canola | plastid | 36.94 | 44.44 |
| CDX87591 | Canola | nucleus | 39.49 | 44.29 |
| CDY27387 | Canola | nucleus | 43.95 | 44.23 |
| CDY14862 | Canola | plastid | 36.62 | 44.06 |
| CDY59041 | Canola | cytosol, nucleus, peroxisome | 40.13 | 44.06 |
| CDY68242 | Canola | plastid | 41.4 | 43.77 |
| CDY41211 | Canola | plastid | 41.08 | 43.73 |
| CDX84222 | Canola | cytosol | 26.43 | 43.23 |
| CDY53687 | Canola | nucleus | 40.45 | 42.62 |
| CDX82978 | Canola | cytosol, nucleus, plastid | 42.68 | 42.54 |
| CDY41289 | Canola | nucleus | 42.68 | 42.54 |
| CDX88286 | Canola | cytosol, endoplasmic reticulum, nucleus | 37.26 | 42.39 |
| CDX76085 | Canola | plastid | 41.4 | 42.35 |
| CDX98771 | Canola | nucleus | 42.68 | 42.27 |
| CDY60321 | Canola | plastid | 39.81 | 42.23 |
| CDY31677 | Canola | cytosol | 26.43 | 42.13 |
| CDY02949 | Canola | plastid | 40.76 | 41.69 |
| CDX94128 | Canola | nucleus | 42.68 | 40.98 |
| CDX96613 | Canola | nucleus | 39.17 | 40.86 |
| CDY33658 | Canola | nucleus | 37.9 | 40.75 |
| CDX68095 | Canola | cytosol | 35.03 | 40.74 |
| CDY01347 | Canola | nucleus | 34.71 | 40.07 |
| CDX85952 | Canola | cytosol | 34.39 | 39.71 |
| CDY31511 | Canola | nucleus | 33.76 | 39.41 |
| CDY31858 | Canola | nucleus | 34.08 | 39.19 |
| CDX75499 | Canola | cytosol, nucleus, peroxisome | 37.58 | 39.07 |
| CDX69136 | Canola | cytosol, nucleus, peroxisome | 37.26 | 38.74 |
| CDY45266 | Canola | plastid | 25.16 | 38.54 |
| CDY04391 | Canola | nucleus | 40.13 | 38.53 |
| CDY21451 | Canola | cytosol | 29.94 | 38.37 |
| CDY29494 | Canola | nucleus | 33.44 | 38.32 |
| CDX83182 | Canola | cytosol | 29.62 | 37.96 |
| CDY65376 | Canola | nucleus | 25.8 | 29.45 |
Protein Annotations
| Gene3D:3.30.1330.80 | MapMan:35.1 | UniProt:A0A078IH80 | InterPro:AT-hook_nuclear | EnsemblPlants:CDY49327 | ProteinID:CDY49327 |
| ProteinID:CDY49327.1 | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003680 | GO:GO:0003700 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 |
| EnsemblPlantsGene:GSBRNA2T00092864001 | InterPro:IPR005175 | PFAM:PF03479 | PIRSF:PIRSF016021 | InterPro:PPC_dom | PFscan:PS51742 |
| PANTHER:PTHR31100 | PANTHER:PTHR31100:SF3 | SUPFAM:SSF117856 | UniParc:UPI0004EE6611 | SEG:seg | : |
Description
BnaA05g32890DAT-hook motif nuclear-localized protein [Source:UniProtKB/TrEMBL;Acc:A0A078IH80]
Coordinates
chrLK032826:-:3369..4313
Molecular Weight (calculated)
32181.7 Da
IEP (calculated)
6.089
GRAVY (calculated)
-0.412
Length
314 amino acids
Sequence
(BLAST)
(BLAST)
001: MANPWWTGQV NLSGLEATPP SSSQLKKPDL HISMNMAMDS GHNNHHHHQE VDTNNNNNED DRDNLSGDDH EPREGAVEAP TRRPRGRPAG SKNKPKPPIF
101: VTRDSPNALK SHVMEIASGT DVIETLATFA RRRQRGICIL SGNGTVANVT LRQPSAATVP GPPGGAAVLA LQGRFEILSL TGSFLPGPAP PGSTGLTIYL
201: ASGQGQIVGG SVVGPLMAAG PVMLIAATFS NATYERLPLD EEEAAEGGGG GVVPGQLGGV GSPLSSGGGR GDGNQGLPVY SMPENLVSSG GGSGGGGQMS
301: GQEAYGWAQA RSGF
101: VTRDSPNALK SHVMEIASGT DVIETLATFA RRRQRGICIL SGNGTVANVT LRQPSAATVP GPPGGAAVLA LQGRFEILSL TGSFLPGPAP PGSTGLTIYL
201: ASGQGQIVGG SVVGPLMAAG PVMLIAATFS NATYERLPLD EEEAAEGGGG GVVPGQLGGV GSPLSSGGGR GDGNQGLPVY SMPENLVSSG GGSGGGGQMS
301: GQEAYGWAQA RSGF
001: MANPWWTGQV NLSGLETTPP GSSQLKKPDL HISMNMAMDS GHNNHHHHQE VDNNNNDDDR DNLSGDDHEP REGAVEAPTR RPRGRPAGSK NKPKPPIFVT
101: RDSPNALKSH VMEIASGTDV IETLATFARR RQRGICILSG NGTVANVTLR QPSTAAVAAA PGGAAVLALQ GRFEILSLTG SFLPGPAPPG STGLTIYLAG
201: GQGQVVGGSV VGPLMAAGPV MLIAATFSNA TYERLPLEEE EAAERGGGGG SGGVVPGQLG GGGSPLSSGA GGGDGNQGLP VYNMPGNLVS NGGSGGGGQM
301: SGQEAYGWAQ ARSGF
101: RDSPNALKSH VMEIASGTDV IETLATFARR RQRGICILSG NGTVANVTLR QPSTAAVAAA PGGAAVLALQ GRFEILSLTG SFLPGPAPPG STGLTIYLAG
201: GQGQVVGGSV VGPLMAAGPV MLIAATFSNA TYERLPLEEE EAAERGGGGG SGGVVPGQLG GGGSPLSSGA GGGDGNQGLP VYNMPGNLVS NGGSGGGGQM
301: SGQEAYGWAQ ARSGF
Arabidopsis Description
AHL19AT-hook motif nuclear-localized protein 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9SR17]
SUBAcon: [mitochondrion,peroxisome,cytosol]
SUBAcon: [mitochondrion,peroxisome,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.