Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra012639.1-P | Field mustard | cytosol | 99.64 | 93.81 |
| AT4G17800.1 | Thale cress | cytosol | 94.89 | 89.04 |
| CDX78802 | Canola | cytosol | 93.07 | 87.63 |
| CDY54780 | Canola | cytosol | 93.07 | 87.33 |
| VIT_02s0012g00880.t01 | Wine grape | cytosol | 73.36 | 71.28 |
| PGSC0003DMT400002959 | Potato | nucleus | 64.96 | 67.17 |
| KRH58197 | Soybean | cytosol | 67.15 | 66.67 |
| KRH04340 | Soybean | cytosol | 59.49 | 64.94 |
| Solyc08g077010.1.1 | Tomato | cytosol | 67.15 | 63.89 |
| CDX79599 | Canola | cytosol, peroxisome, plastid | 63.14 | 63.37 |
| CDY72485 | Canola | nucleus | 63.14 | 63.37 |
| PGSC0003DMT400045203 | Potato | nucleus | 66.42 | 62.76 |
| CDY59041 | Canola | cytosol, nucleus, peroxisome | 64.23 | 61.54 |
| CDX84222 | Canola | cytosol | 41.24 | 58.85 |
| GSMUA_Achr5P03390_001 | Banana | nucleus | 55.11 | 58.3 |
| GSMUA_Achr2P04780_001 | Banana | cytosol, nucleus, plastid | 53.65 | 57.65 |
| CDY31677 | Canola | cytosol | 40.88 | 56.85 |
| GSMUA_Achr5P13920_001 | Banana | nucleus | 42.7 | 51.54 |
| CDY37040 | Canola | nucleus | 53.65 | 47.73 |
| CDY27387 | Canola | nucleus | 54.01 | 47.44 |
| CDY18931 | Canola | nucleus | 51.82 | 45.95 |
| CDX74739 | Canola | nucleus | 51.82 | 45.81 |
| CDX98771 | Canola | nucleus | 52.55 | 45.43 |
| CDX87591 | Canola | nucleus | 45.62 | 44.64 |
| CDX82978 | Canola | cytosol, nucleus, plastid | 51.09 | 44.44 |
| CDX88286 | Canola | cytosol, endoplasmic reticulum, nucleus | 44.53 | 44.2 |
| CDY41289 | Canola | nucleus | 50.73 | 44.13 |
| CDX94128 | Canola | nucleus | 52.55 | 44.04 |
| CDY20404 | Canola | nucleus | 43.43 | 43.91 |
| CDY45983 | Canola | nucleus | 45.62 | 43.4 |
| CDY23160 | Canola | cytosol, nucleus, vacuole | 44.16 | 43.37 |
| CDY21124 | Canola | cytosol, endoplasmic reticulum, peroxisome | 45.26 | 43.06 |
| CDX68095 | Canola | cytosol | 42.34 | 42.96 |
| CDY12779 | Canola | cytosol, nucleus, vacuole | 44.16 | 42.91 |
| CDY30003 | Canola | cytosol, nucleus, peroxisome, plastid | 45.26 | 42.91 |
| CDY04391 | Canola | nucleus | 50.37 | 42.2 |
| CDY64701 | Canola | nucleus | 47.81 | 42.12 |
| CDX69136 | Canola | cytosol, nucleus, peroxisome | 45.99 | 41.72 |
| CDX75499 | Canola | cytosol, nucleus, peroxisome | 45.62 | 41.39 |
| CDX85952 | Canola | cytosol | 40.88 | 41.18 |
| CDY53650 | Canola | plastid | 38.69 | 40.77 |
| CDX79838 | Canola | plastid | 38.69 | 40.77 |
| CDY49327 | Canola | cytosol, endoplasmic reticulum, nucleus | 46.72 | 40.76 |
| CDX96613 | Canola | nucleus | 44.53 | 40.53 |
| CDY14862 | Canola | plastid | 37.96 | 39.85 |
| CDY70947 | Canola | plastid | 37.96 | 39.85 |
| CDY45266 | Canola | plastid | 29.56 | 39.51 |
| CDY60321 | Canola | plastid | 42.34 | 39.19 |
| CDY33658 | Canola | nucleus | 41.61 | 39.04 |
| CDY53687 | Canola | nucleus | 42.34 | 38.93 |
| CDY68242 | Canola | plastid | 41.97 | 38.72 |
| CDY31511 | Canola | nucleus | 37.96 | 38.66 |
| CDY41211 | Canola | plastid | 41.61 | 38.64 |
| CDY29494 | Canola | nucleus | 37.59 | 37.59 |
| CDY21451 | Canola | cytosol | 33.58 | 37.55 |
| CDX76085 | Canola | plastid | 41.97 | 37.46 |
| CDX83182 | Canola | cytosol | 33.21 | 37.14 |
| CDY02949 | Canola | plastid | 41.61 | 37.13 |
| CDY01347 | Canola | nucleus | 36.86 | 37.13 |
| CDY31858 | Canola | nucleus | 36.86 | 37.0 |
| CDY65376 | Canola | nucleus | 30.66 | 30.55 |
Protein Annotations
| EnsemblPlants:CDX90445 | EnsemblPlantsGene:GSBRNA2T00151055001 | Gene3D:3.30.1330.80 | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31100 |
| PANTHER:PTHR31100:SF21 | PFAM:PF03479 | PFscan:PS51742 | ProteinID:CDX90445 | ProteinID:CDX90445.1 | SEG:seg |
| SUPFAM:SSF117856 | UniParc:UPI0004EE5B65 | MapMan:35.1 | : | : | : |
Description
BnaA03g43360D
Coordinates
chrLK031863:+:255529..256404
Molecular Weight (calculated)
27538.6 Da
IEP (calculated)
7.673
GRAVY (calculated)
-0.136
Length
274 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGLDLGTSF RYVNHQLHRP DLHLHHNSSS DDVTPGVGIA SGGGGSGSSG GGHGGGGGDG VGRRPRGRPP GSKNKPKPPV IITRESANTL RAHILEVTNG
101: CDVFDCVATY ARRRQRGICV LSGSGTVTNV SIRQPSAAGA VVTLQGTFEI LSLSGSFLPP PAPPGATSLT IFVAGGQGQV IGGSVVGELT AAGPVIVIAA
201: SFTNVAYERL PLEEDEQQHL GGGGGANGGG NLFPEVAGGG GGGLPFFNLP MNMQPNVQLP VEGWPGNSGG RGPF
101: CDVFDCVATY ARRRQRGICV LSGSGTVTNV SIRQPSAAGA VVTLQGTFEI LSLSGSFLPP PAPPGATSLT IFVAGGQGQV IGGSVVGELT AAGPVIVIAA
201: SFTNVAYERL PLEEDEQQHL GGGGGANGGG NLFPEVAGGG GGGLPFFNLP MNMQPNVQLP VEGWPGNSGG RGPF
001: MAGLDLGTAF RYVNHQLHRP DLHLHHNSSS DDVTPGAGMG HFTVDDEDNN NNHQGLDLAS GGGSGSSGGG GGHGGGGDVV GRRPRGRPPG SKNKPKPPVI
101: ITRESANTLR AHILEVTNGC DVFDCVATYA RRRQRGICVL SGSGTVTNVS IRQPSAAGAV VTLQGTFEIL SLSGSFLPPP APPGATSLTI FLAGGQGQVV
201: GGSVVGELTA AGPVIVIAAS FTNVAYERLP LEEDEQQQQL GGGSNGGGNL FPEVAAGGGG GLPFFNLPMN MQPNVQLPVE GWPGNSGGRG PF
101: ITRESANTLR AHILEVTNGC DVFDCVATYA RRRQRGICVL SGSGTVTNVS IRQPSAAGAV VTLQGTFEIL SLSGSFLPPP APPGATSLTI FLAGGQGQVV
201: GGSVVGELTA AGPVIVIAAS FTNVAYERLP LEEDEQQQQL GGGSNGGGNL FPEVAAGGGG GLPFFNLPMN MQPNVQLPVE GWPGNSGGRG PF
Arabidopsis Description
AHL23AT-hook motif nuclear-localized protein 23 [Source:UniProtKB/Swiss-Prot;Acc:O23620]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.