Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 3
- mitochondrion 2
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH04340 | Soybean | cytosol | 71.01 | 78.09 |
| KRH77205 | Soybean | nucleus | 68.84 | 76.0 |
| KRH28289 | Soybean | cytosol | 68.12 | 75.2 |
| VIT_02s0012g00880.t01 | Wine grape | cytosol | 72.1 | 70.57 |
| PGSC0003DMT400002959 | Potato | nucleus | 66.67 | 69.43 |
| KRH00993 | Soybean | nucleus | 66.67 | 68.66 |
| KRH40225 | Soybean | nucleus | 66.67 | 68.15 |
| CDX90445 | Canola | plastid | 66.67 | 67.15 |
| AT4G17800.1 | Thale cress | cytosol | 70.29 | 66.44 |
| CDX78802 | Canola | cytosol | 68.84 | 65.29 |
| Bra040183.1-P | Field mustard | cytosol | 68.84 | 64.85 |
| Bra012639.1-P | Field mustard | cytosol | 68.12 | 64.6 |
| CDY54780 | Canola | cytosol | 68.12 | 64.38 |
| Solyc08g077010.1.1 | Tomato | cytosol | 67.03 | 64.24 |
| PGSC0003DMT400045203 | Potato | nucleus | 67.03 | 63.79 |
| GSMUA_Achr2P04780_001 | Banana | cytosol, nucleus, plastid | 52.54 | 56.86 |
| GSMUA_Achr5P03390_001 | Banana | nucleus | 53.26 | 56.76 |
| GSMUA_Achr5P13920_001 | Banana | nucleus | 42.03 | 51.1 |
| KRH31728 | Soybean | cytosol | 48.91 | 50.0 |
| KRG90376 | Soybean | nucleus | 47.83 | 49.25 |
| KRH04051 | Soybean | nucleus | 51.09 | 49.13 |
| KRH57320 | Soybean | nucleus | 50.36 | 49.12 |
| KRH15076 | Soybean | nucleus | 30.8 | 48.85 |
| KRH51551 | Soybean | plastid | 35.87 | 48.53 |
| KRH73062 | Soybean | cytosol | 39.86 | 48.03 |
| KRH76289 | Soybean | nucleus | 50.0 | 47.92 |
| KRH14482 | Soybean | cytosol, mitochondrion, peroxisome | 42.75 | 47.39 |
| KRH65251 | Soybean | nucleus | 52.17 | 46.45 |
| KRH28008 | Soybean | nucleus | 50.0 | 46.31 |
| KRG92616 | Soybean | nucleus | 46.38 | 46.21 |
| KRH34516 | Soybean | cytosol, nucleus, peroxisome | 48.55 | 46.21 |
| KRH34163 | Soybean | nucleus | 46.74 | 46.07 |
| KRH77431 | Soybean | nucleus | 50.0 | 46.0 |
| KRH73632 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 41.3 | 45.97 |
| KRH31005 | Soybean | nucleus | 46.38 | 44.29 |
| KRG92293 | Soybean | cytosol, mitochondrion, nucleus | 47.83 | 43.56 |
| KRG97871 | Soybean | nucleus | 47.1 | 43.05 |
| KRH16838 | Soybean | nucleus | 34.42 | 37.11 |
| KRH52892 | Soybean | nucleus | 38.04 | 36.97 |
| KRH72453 | Soybean | nucleus | 36.23 | 36.9 |
| KRH62181 | Soybean | nucleus | 37.32 | 36.79 |
Protein Annotations
| EntrezGene:100789193 | Gene3D:3.30.1330.80 | MapMan:35.1 | EMBL:ACUP02003232 | InterPro:AT-hook_nuclear | EnsemblPlantsGene:GLYMA_05G111500 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003680 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | UniProt:I1K2J1 |
| InterPro:IPR005175 | EnsemblPlants:KRH58197 | ProteinID:KRH58197 | ProteinID:KRH58197.1 | PFAM:PF03479 | PIRSF:PIRSF016021 |
| InterPro:PPC_dom | PFscan:PS51742 | PANTHER:PTHR31100 | PANTHER:PTHR31100:SF21 | SUPFAM:SSF117856 | UniParc:UPI0000597D88 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr5:+:29729388..29730984
Molecular Weight (calculated)
29366.6 Da
IEP (calculated)
6.679
GRAVY (calculated)
-0.411
Length
276 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGLDLGSAS RFVQNLHLPD LHLQQNYQQP RHKRDSEEQE TPPNPGTALA PFDNDDDKSQ GLELASGPGD IVGRRPRGRP SGSKNKPKPP VIITRESANT
101: LRAHILEVGS GSDVFDCVTA YARRRQRGIC VLSGSGTVTN VSLRQPAAAG AVVRLHGRFE ILSLSGSFLP PPAPPGATSL TIYLAGGQGQ VVGGNVVGEL
201: TAAGPVIVIA ASFTNVAYER LPLEEDEQQQ QQLQIQSPAT TSSQGNNNNN PFPDPSSGLP FFNLPLNMQN VQLPPF
101: LRAHILEVGS GSDVFDCVTA YARRRQRGIC VLSGSGTVTN VSLRQPAAAG AVVRLHGRFE ILSLSGSFLP PPAPPGATSL TIYLAGGQGQ VVGGNVVGEL
201: TAAGPVIVIA ASFTNVAYER LPLEEDEQQQ QQLQIQSPAT TSSQGNNNNN PFPDPSSGLP FFNLPLNMQN VQLPPF
001: MAGLDLGTAF RYVNHQLHRP DLHLHHNSSS DDVTPGAGMG HFTVDDEDNN NNHQGLDLAS GGGSGSSGGG GGHGGGGDVV GRRPRGRPPG SKNKPKPPVI
101: ITRESANTLR AHILEVTNGC DVFDCVATYA RRRQRGICVL SGSGTVTNVS IRQPSAAGAV VTLQGTFEIL SLSGSFLPPP APPGATSLTI FLAGGQGQVV
201: GGSVVGELTA AGPVIVIAAS FTNVAYERLP LEEDEQQQQL GGGSNGGGNL FPEVAAGGGG GLPFFNLPMN MQPNVQLPVE GWPGNSGGRG PF
101: ITRESANTLR AHILEVTNGC DVFDCVATYA RRRQRGICVL SGSGTVTNVS IRQPSAAGAV VTLQGTFEIL SLSGSFLPPP APPGATSLTI FLAGGQGQVV
201: GGSVVGELTA AGPVIVIAAS FTNVAYERLP LEEDEQQQQL GGGSNGGGNL FPEVAAGGGG GLPFFNLPMN MQPNVQLPVE GWPGNSGGRG PF
Arabidopsis Description
AHL23AT-hook motif nuclear-localized protein 23 [Source:UniProtKB/Swiss-Prot;Acc:O23620]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.