Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH15076 | Soybean | nucleus | 58.52 | 77.01 |
| KRH31005 | Soybean | nucleus | 73.36 | 58.13 |
| KRG97871 | Soybean | nucleus | 72.49 | 54.97 |
| GSMUA_Achr5P28720_001 | Banana | mitochondrion, peroxisome, plastid | 58.95 | 51.53 |
| Os03t0270000-01 | Rice | nucleus | 54.59 | 48.45 |
| TraesCS4D01G210500.1 | Wheat | cytosol, nucleus, plastid | 54.15 | 48.44 |
| TraesCS4B01G209800.1 | Wheat | cytosol, nucleus, plastid | 54.15 | 48.44 |
| TraesCS4A01G094700.1 | Wheat | cytosol, nucleus, plastid | 54.15 | 48.44 |
| VIT_13s0019g02080.t01 | Wine grape | nucleus | 69.0 | 48.32 |
| HORVU4Hr1G060280.1 | Barley | cytosol, nucleus, plastid | 53.71 | 48.05 |
| KRH31728 | Soybean | cytosol | 54.15 | 45.93 |
| KRH51551 | Soybean | plastid | 40.61 | 45.59 |
| GSMUA_Achr11P... | Banana | nucleus | 58.08 | 45.24 |
| EER95114 | Sorghum | nucleus | 53.71 | 45.22 |
| KRG90376 | Soybean | nucleus | 52.84 | 45.15 |
| KRH28289 | Soybean | cytosol | 48.47 | 44.4 |
| KRH77205 | Soybean | nucleus | 48.47 | 44.4 |
| KRH34163 | Soybean | nucleus | 54.15 | 44.29 |
| KRH04340 | Soybean | cytosol | 48.47 | 44.22 |
| Zm00001d028577_P001 | Maize | nucleus | 52.4 | 43.96 |
| KRH34516 | Soybean | cytosol, nucleus, peroxisome | 55.46 | 43.79 |
| KRG92616 | Soybean | nucleus | 52.4 | 43.32 |
| GSMUA_Achr7P10630_001 | Banana | plastid | 55.02 | 43.3 |
| Bra003217.1-P | Field mustard | nucleus | 55.9 | 42.95 |
| KRH00993 | Soybean | nucleus | 50.22 | 42.91 |
| CDY60321 | Canola | plastid | 55.46 | 42.91 |
| PGSC0003DMT400069792 | Potato | cytosol, nucleus, plastid | 58.52 | 42.68 |
| CDY53687 | Canola | nucleus | 55.46 | 42.62 |
| Bra007176.1-P | Field mustard | plastid | 55.02 | 42.42 |
| CDY68242 | Canola | plastid | 55.02 | 42.42 |
| CDY41211 | Canola | plastid | 54.59 | 42.37 |
| KRH40225 | Soybean | nucleus | 49.78 | 42.22 |
| CDY02949 | Canola | plastid | 56.33 | 42.02 |
| AT3G55560.1 | Thale cress | plastid | 56.77 | 41.94 |
| Bra014735.1-P | Field mustard | plastid | 55.9 | 41.69 |
| CDX76085 | Canola | plastid | 55.9 | 41.69 |
| GSMUA_Achr6P04980_001 | Banana | cytosol, nucleus, plastid | 51.97 | 41.46 |
| Solyc05g053000.1.1 | Tomato | nucleus | 56.33 | 41.21 |
| GSMUA_Achr6P01060_001 | Banana | nucleus | 50.22 | 41.07 |
| GSMUA_Achr9P28280_001 | Banana | plastid | 53.28 | 40.67 |
| KRG92293 | Soybean | cytosol, mitochondrion, nucleus | 53.71 | 40.59 |
| KRH58197 | Soybean | cytosol | 48.03 | 39.86 |
| KRH14482 | Soybean | cytosol, mitochondrion, peroxisome | 42.79 | 39.36 |
| KRH76289 | Soybean | nucleus | 49.34 | 39.24 |
| KRH73632 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 41.92 | 38.71 |
| GSMUA_Achr7P15000_001 | Banana | nucleus | 47.16 | 38.71 |
| KRH57320 | Soybean | nucleus | 45.41 | 36.75 |
| KRH04051 | Soybean | nucleus | 45.41 | 36.24 |
| KRH65251 | Soybean | nucleus | 48.03 | 35.48 |
| KRH28008 | Soybean | nucleus | 45.85 | 35.23 |
| KRH77431 | Soybean | nucleus | 44.98 | 34.33 |
| KRH62181 | Soybean | nucleus | 39.74 | 32.5 |
| KRH16838 | Soybean | nucleus | 36.24 | 32.42 |
| KRH52892 | Soybean | nucleus | 40.17 | 32.39 |
| KRH72453 | Soybean | nucleus | 37.55 | 31.73 |
Protein Annotations
| Gene3D:3.30.1330.80 | MapMan:35.1 | EMBL:ACUP02001263 | EMBL:ACUP02001264 | InterPro:AT-hook_nuclear | EnsemblPlantsGene:GLYMA_02G249800 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003680 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | UniProt:I1JI12 |
| InterPro:IPR005175 | EnsemblPlants:KRH73062 | ProteinID:KRH73062 | ProteinID:KRH73062.1 | PFAM:PF03479 | PIRSF:PIRSF016021 |
| InterPro:PPC_dom | PFscan:PS51742 | PANTHER:PTHR31100 | PANTHER:PTHR31100:SF13 | SUPFAM:SSF117856 | UniParc:UPI000296610D |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr2:-:43733046..43736212
Molecular Weight (calculated)
23865.5 Da
IEP (calculated)
4.352
GRAVY (calculated)
-0.457
Length
229 amino acids
Sequence
(BLAST)
(BLAST)
001: MANRWWAGNV PVRPNEQDDG DNNPTPTNSG NSNTNVNAVT EDDANTNDGE DQNLSAGRRP RGRPPGSRNK PKPPVVVTKE SPNALHSHIL EISGGSDVAE
101: CIATFATRRH RGVSVLSGSG VVTNVTLRQP AAPGGVITLQ GRFEILSLSG AFLPAPSPPE ATGLTVYLAG GEGQVVGGSV VGPLVASGPV MVVAATFANA
201: TYERLPLEDE QGEEDMPDVN EDNYGTGEF
101: CIATFATRRH RGVSVLSGSG VVTNVTLRQP AAPGGVITLQ GRFEILSLSG AFLPAPSPPE ATGLTVYLAG GEGQVVGGSV VGPLVASGPV MVVAATFANA
201: TYERLPLEDE QGEEDMPDVN EDNYGTGEF
001: MDGGYDQSGG ASRYFHNLFR PELHHQLQPQ PQLHPLPQPQ PQPQPQQQNS DDESDSNKDP GSDPVTSGST GKRPRGRPPG SKNKPKPPVI VTRDSPNVLR
101: SHVLEVSSGA DIVESVTTYA RRRGRGVSIL SGNGTVANVS LRQPATTAAH GANGGTGGVV ALHGRFEILS LTGTVLPPPA PPGSGGLSIF LSGVQGQVIG
201: GNVVAPLVAS GPVILMAASF SNATFERLPL EDEGGEGGEG GEVGEGGGGE GGPPPATSSS PPSGAGQGQL RGNMSGYDQF AGDPHLLGWG AAAAAAPPRP
301: AF
101: SHVLEVSSGA DIVESVTTYA RRRGRGVSIL SGNGTVANVS LRQPATTAAH GANGGTGGVV ALHGRFEILS LTGTVLPPPA PPGSGGLSIF LSGVQGQVIG
201: GNVVAPLVAS GPVILMAASF SNATFERLPL EDEGGEGGEG GEVGEGGGGE GGPPPATSSS PPSGAGQGQL RGNMSGYDQF AGDPHLLGWG AAAAAAPPRP
301: AF
Arabidopsis Description
AHL29AT-hook motif nuclear-localized protein 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.