Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG92616 | Soybean | nucleus | 90.36 | 91.34 |
| VIT_14s0081g00670.t01 | Wine grape | mitochondrion | 70.71 | 68.04 |
| Solyc11g006090.1.1 | Tomato | nucleus | 59.64 | 65.49 |
| PGSC0003DMT400073795 | Potato | nucleus | 66.79 | 62.96 |
| KRH31728 | Soybean | cytosol | 60.36 | 62.59 |
| KRG90376 | Soybean | nucleus | 59.64 | 62.31 |
| KRH34516 | Soybean | cytosol, nucleus, peroxisome | 61.79 | 59.66 |
| CDY64701 | Canola | nucleus | 62.14 | 55.95 |
| AT3G04570.1 | Thale cress | cytosol, mitochondrion, peroxisome | 62.5 | 55.56 |
| KRG92293 | Soybean | cytosol, mitochondrion, nucleus | 60.0 | 55.45 |
| CDY49327 | Canola | cytosol, endoplasmic reticulum, nucleus | 61.79 | 55.1 |
| CDY21124 | Canola | cytosol, endoplasmic reticulum, peroxisome | 56.43 | 54.86 |
| Bra040184.1-P | Field mustard | cytosol, nucleus, peroxisome | 61.43 | 54.78 |
| CDY30003 | Canola | cytosol, nucleus, peroxisome, plastid | 56.43 | 54.67 |
| KRH73062 | Soybean | cytosol | 44.29 | 54.15 |
| KRH15076 | Soybean | nucleus | 32.86 | 52.87 |
| Bra040135.1-P | Field mustard | cytosol, nucleus, peroxisome | 53.93 | 51.19 |
| KRH31005 | Soybean | nucleus | 52.14 | 50.52 |
| KRH77205 | Soybean | nucleus | 45.0 | 50.4 |
| KRH28289 | Soybean | cytosol | 44.29 | 49.6 |
| KRH76289 | Soybean | nucleus | 50.71 | 49.31 |
| KRH57320 | Soybean | nucleus | 48.93 | 48.41 |
| KRG97871 | Soybean | nucleus | 51.79 | 48.01 |
| KRH51551 | Soybean | plastid | 34.64 | 47.55 |
| KRH04051 | Soybean | nucleus | 48.21 | 47.04 |
| KRH04340 | Soybean | cytosol | 42.14 | 47.01 |
| KRH58197 | Soybean | cytosol | 46.07 | 46.74 |
| KRH40225 | Soybean | nucleus | 44.64 | 46.3 |
| KRH00993 | Soybean | nucleus | 43.93 | 45.9 |
| KRH65251 | Soybean | nucleus | 50.71 | 45.81 |
| KRH14482 | Soybean | cytosol, mitochondrion, peroxisome | 40.0 | 44.98 |
| KRH77431 | Soybean | nucleus | 46.79 | 43.67 |
| KRH73632 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 38.57 | 43.55 |
| KRH28008 | Soybean | nucleus | 46.07 | 43.29 |
| KRH62181 | Soybean | nucleus | 36.07 | 36.07 |
| KRH52892 | Soybean | nucleus | 36.43 | 35.92 |
| KRH72453 | Soybean | nucleus | 33.21 | 34.32 |
| KRH16838 | Soybean | nucleus | 30.36 | 33.2 |
Protein Annotations
| EntrezGene:100795097 | Gene3D:3.30.1330.80 | MapMan:35.1 | EMBL:ACUP02006582 | InterPro:AT-hook_nuclear | EnsemblPlantsGene:GLYMA_10G167100 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003680 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | UniProt:I1LBS0 |
| InterPro:IPR005175 | EnsemblPlants:KRH34163 | ProteinID:KRH34163 | ProteinID:KRH34163.1 | PFAM:PF03479 | PIRSF:PIRSF016021 |
| InterPro:PPC_dom | PFscan:PS51742 | PANTHER:PTHR31100 | PANTHER:PTHR31100:SF42 | SUPFAM:SSF117856 | UniParc:UPI0001950F36 |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr10:+:40144743..40146501
Molecular Weight (calculated)
29232.2 Da
IEP (calculated)
6.606
GRAVY (calculated)
-0.479
Length
280 amino acids
Sequence
(BLAST)
(BLAST)
001: MANRWWTGSV GLENSGHSMK KPDLGFSMNE STVTGNHIGE EDEDRENSDE PREGAIDVAT TRRPRGRPPG SRNKPKPPIF VTRDSPNALR SHVMEIAVGA
101: DIADCVAQFA RRRQRGVSIL SGSGTVVNVN LRQPTAPGAV MALHGRFDIL SLTGSFLPGP SPPGATGLTI YLAGGQGQIV GGGVVGPLVA AGPVLVMAAT
201: FSNATYERLP LEDDDQEQHG GGGGGGSPQE KTGGPGEASS SISVYNNNVP PSLGLPNGQH LNHEAYSSPW GHSPHARPPF
101: DIADCVAQFA RRRQRGVSIL SGSGTVVNVN LRQPTAPGAV MALHGRFDIL SLTGSFLPGP SPPGATGLTI YLAGGQGQIV GGGVVGPLVA AGPVLVMAAT
201: FSNATYERLP LEDDDQEQHG GGGGGGSPQE KTGGPGEASS SISVYNNNVP PSLGLPNGQH LNHEAYSSPW GHSPHARPPF
001: MANPWWTNQS GLAGMVDHSV SSGHHQNHHH QSLLTKGDLG IAMNQSQDND QDEEDDPREG AVEVVNRRPR GRPPGSKNKP KAPIFVTRDS PNALRSHVLE
101: ISDGSDVADT IAHFSRRRQR GVCVLSGTGS VANVTLRQAA APGGVVSLQG RFEILSLTGA FLPGPSPPGS TGLTVYLAGV QGQVVGGSVV GPLLAIGSVM
201: VIAATFSNAT YERLPMEEEE DGGGSRQIHG GGDSPPRIGS NLPDLSGMAG PGYNMPPHLI PNGAGQLGHE PYTWVHARPP Y
101: ISDGSDVADT IAHFSRRRQR GVCVLSGTGS VANVTLRQAA APGGVVSLQG RFEILSLTGA FLPGPSPPGS TGLTVYLAGV QGQVVGGSVV GPLLAIGSVM
201: VIAATFSNAT YERLPMEEEE DGGGSRQIHG GGDSPPRIGS NLPDLSGMAG PGYNMPPHLI PNGAGQLGHE PYTWVHARPP Y
Arabidopsis Description
AHL20AT-hook motif nuclear-localized protein 20 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWQ2]
SUBAcon: [plastid,nucleus,cytosol]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.