Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH28008 | Soybean | nucleus | 92.67 | 93.29 |
| KRH57320 | Soybean | nucleus | 78.67 | 83.39 |
| KRH04051 | Soybean | nucleus | 78.33 | 81.88 |
| VIT_02s0025g05100.t01 | Wine grape | nucleus | 78.0 | 77.48 |
| Solyc06g060500.1.1 | Tomato | nucleus | 55.0 | 75.0 |
| PGSC0003DMT400045315 | Potato | nucleus | 55.0 | 74.66 |
| Solyc08g079720.2.1 | Tomato | nucleus | 69.67 | 71.58 |
| PGSC0003DMT400010004 | Potato | nucleus | 69.33 | 70.99 |
| PGSC0003DMT400032509 | Potato | nucleus | 68.67 | 66.24 |
| Solyc08g007560.1.1 | Tomato | nucleus | 70.0 | 65.83 |
| KRH76289 | Soybean | nucleus | 59.67 | 62.15 |
| KRH65251 | Soybean | nucleus | 63.33 | 61.29 |
| KRH28289 | Soybean | cytosol | 48.67 | 58.4 |
| KRH77205 | Soybean | nucleus | 48.0 | 57.6 |
| TraesCS6D01G167600.1 | Wheat | nucleus | 58.0 | 56.31 |
| KRH73632 | Soybean | cytosol, endoplasmic reticulum, peroxisome | 46.33 | 56.05 |
| HORVU6Hr1G037630.1 | Barley | nucleus | 57.67 | 55.99 |
| Zm00001d016132_P001 | Maize | nucleus | 57.67 | 55.99 |
| HORVU6Hr1G037640.1 | Barley | nucleus | 57.67 | 55.99 |
| KRH14482 | Soybean | cytosol, mitochondrion, peroxisome | 46.33 | 55.82 |
| TraesCS6B01G209300.1 | Wheat | nucleus | 57.33 | 55.66 |
| TraesCS6A01G176200.1 | Wheat | nucleus | 57.33 | 55.66 |
| Os02t0448000-00 | Rice | nucleus | 57.67 | 54.75 |
| Zm00001d053429_P001 | Maize | nucleus | 58.33 | 54.69 |
| EES04848 | Sorghum | nucleus | 59.0 | 54.13 |
| KRH31728 | Soybean | cytosol | 48.33 | 53.7 |
| KRH00993 | Soybean | nucleus | 47.33 | 52.99 |
| KRG90376 | Soybean | nucleus | 46.67 | 52.24 |
| KRH04340 | Soybean | cytosol | 43.67 | 52.19 |
| KRH40225 | Soybean | nucleus | 46.67 | 51.85 |
| KRH51551 | Soybean | plastid | 34.67 | 50.98 |
| KRH58197 | Soybean | cytosol | 46.0 | 50.0 |
| KRG92616 | Soybean | nucleus | 45.0 | 48.74 |
| KRH34516 | Soybean | cytosol, nucleus, peroxisome | 45.33 | 46.9 |
| KRH34163 | Soybean | nucleus | 43.67 | 46.79 |
| KRH15076 | Soybean | nucleus | 26.67 | 45.98 |
| KRH73062 | Soybean | cytosol | 34.33 | 44.98 |
| KRG92293 | Soybean | cytosol, mitochondrion, nucleus | 45.0 | 44.55 |
| KRH31005 | Soybean | nucleus | 42.0 | 43.6 |
| KRG97871 | Soybean | nucleus | 42.33 | 42.05 |
| KRH62181 | Soybean | nucleus | 33.67 | 36.07 |
| KRH16838 | Soybean | nucleus | 30.67 | 35.94 |
| KRH52892 | Soybean | nucleus | 34.0 | 35.92 |
| KRH72453 | Soybean | nucleus | 31.67 | 35.06 |
Protein Annotations
| EntrezGene:100781436 | Gene3D:3.30.1330.80 | MapMan:35.1 | EMBL:ACUP02000673 | InterPro:AT-hook_nuclear | EnsemblPlantsGene:GLYMA_01G213100 |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003680 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | UniProt:I1J9Z9 |
| InterPro:IPR005175 | ProteinID:KRH77430.1 | EnsemblPlants:KRH77431 | ProteinID:KRH77431 | ProteinID:KRH77431.1 | PFAM:PF03479 |
| PIRSF:PIRSF016021 | InterPro:PPC_dom | PFscan:PS51742 | PANTHER:PTHR31100 | PANTHER:PTHR31100:SF15 | SUPFAM:SSF117856 |
| UniParc:UPI00023374F5 | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr1:+:54443192..54446081
Molecular Weight (calculated)
30912.2 Da
IEP (calculated)
6.799
GRAVY (calculated)
-0.397
Length
300 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPITAHGHS LPPPFHAGRD LHLHQQQHQF HSLQEDEQSG SSGGLNLAHK REHEENNNNN SSDGKEGGGA GSGETEISRR PRGRPAGSKN KPKPPIIITR
101: DSANALKTHV MEVADGCDIV DSVSAFARRR QRGVCIMSGT GTVTNVTLRQ PASSGAVVTL HGRFEILSLA GSFLPPPAPP AASGLTIYLA GGQGQVVGGS
201: VVGALIASGP VVIMSASFSN AAYERLPLED EDPSMALQGG GSIGSPGGGG GGGGGVGQQQ PSQQLMGDST APLFHGLNPN LLNSVQMPSE TFWATGRSPY
101: DSANALKTHV MEVADGCDIV DSVSAFARRR QRGVCIMSGT GTVTNVTLRQ PASSGAVVTL HGRFEILSLA GSFLPPPAPP AASGLTIYLA GGQGQVVGGS
201: VVGALIASGP VVIMSASFSN AAYERLPLED EDPSMALQGG GSIGSPGGGG GGGGGVGQQQ PSQQLMGDST APLFHGLNPN LLNSVQMPSE TFWATGRSPY
001: MAGGTALTPT SVGSKSVPMR NHEATERGNT NNNLRALPKA VQPVSSIEGE MAKRPRGRPA GSKNKPKPPI IVTHDSPNSL RANAVEISSG CDICETLSDF
101: ARRKQRGLCI LSANGCVTNV TLRQPASSGA IVTLHGRYEI LSLLGSILPP PAPLGITGLT IYLAGPQGQV VGGGVVGGLI ASGPVVLMAA SFMNAVFDRL
201: PMDDDEAASM QNQQYYQNGR SRPLDDIHGL PQNLLTNGNS ASDIYSWGPA QRVMSKP
101: ARRKQRGLCI LSANGCVTNV TLRQPASSGA IVTLHGRYEI LSLLGSILPP PAPLGITGLT IYLAGPQGQV VGGGVVGGLI ASGPVVLMAA SFMNAVFDRL
201: PMDDDEAASM QNQQYYQNGR SRPLDDIHGL PQNLLTNGNS ASDIYSWGPA QRVMSKP
Arabidopsis Description
AHL16AT-hook motif nuclear-localized protein [Source:UniProtKB/TrEMBL;Acc:A0A178VQG3]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.