Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040183.1-P | Field mustard | cytosol | 100.0 | 99.32 |
| CDY54780 | Canola | cytosol | 98.63 | 98.29 |
| AT4G17800.1 | Thale cress | cytosol | 94.5 | 94.18 |
| CDX90445 | Canola | plastid | 87.63 | 93.07 |
| VIT_02s0012g00880.t01 | Wine grape | cytosol | 70.45 | 72.69 |
| KRH58197 | Soybean | cytosol | 65.29 | 68.84 |
| KRH04340 | Soybean | cytosol | 57.73 | 66.93 |
| PGSC0003DMT400002959 | Potato | nucleus | 60.82 | 66.79 |
| CDY72485 | Canola | nucleus | 62.2 | 66.3 |
| CDX79599 | Canola | cytosol, peroxisome, plastid | 61.86 | 65.93 |
| Solyc08g077010.1.1 | Tomato | cytosol | 64.95 | 65.62 |
| CDY59041 | Canola | cytosol, nucleus, peroxisome | 63.57 | 64.69 |
| PGSC0003DMT400045203 | Potato | nucleus | 64.26 | 64.48 |
| CDX84222 | Canola | cytosol | 39.52 | 59.9 |
| GSMUA_Achr5P03390_001 | Banana | nucleus | 53.26 | 59.85 |
| GSMUA_Achr2P04780_001 | Banana | cytosol, nucleus, plastid | 51.2 | 58.43 |
| CDY31677 | Canola | cytosol | 39.18 | 57.87 |
| GSMUA_Achr5P13920_001 | Banana | nucleus | 40.55 | 51.98 |
| CDY37040 | Canola | nucleus | 51.55 | 48.7 |
| CDY27387 | Canola | nucleus | 51.89 | 48.4 |
| CDY18931 | Canola | nucleus | 49.83 | 46.93 |
| CDX74739 | Canola | nucleus | 49.83 | 46.77 |
| CDX98771 | Canola | nucleus | 50.52 | 46.37 |
| CDX82978 | Canola | cytosol, nucleus, plastid | 48.8 | 45.08 |
| CDX94128 | Canola | nucleus | 50.52 | 44.95 |
| CDY41289 | Canola | nucleus | 48.45 | 44.76 |
| CDY21124 | Canola | cytosol, endoplasmic reticulum, peroxisome | 43.99 | 44.44 |
| CDY30003 | Canola | cytosol, nucleus, peroxisome, plastid | 43.99 | 44.29 |
| CDY23160 | Canola | cytosol, nucleus, vacuole | 41.92 | 43.73 |
| CDX87591 | Canola | nucleus | 41.92 | 43.57 |
| CDY20404 | Canola | nucleus | 40.55 | 43.54 |
| CDY64701 | Canola | nucleus | 46.39 | 43.41 |
| CDY12779 | Canola | cytosol, nucleus, vacuole | 41.92 | 43.26 |
| CDY04391 | Canola | nucleus | 48.45 | 43.12 |
| CDX88286 | Canola | cytosol, endoplasmic reticulum, nucleus | 40.89 | 43.12 |
| CDY45983 | Canola | nucleus | 42.61 | 43.06 |
| CDX69136 | Canola | cytosol, nucleus, peroxisome | 44.33 | 42.72 |
| CDX75499 | Canola | cytosol, nucleus, peroxisome | 43.99 | 42.38 |
| CDY49327 | Canola | cytosol, endoplasmic reticulum, nucleus | 45.36 | 42.04 |
| CDX79838 | Canola | plastid | 37.46 | 41.92 |
| CDY53650 | Canola | plastid | 37.46 | 41.92 |
| CDX68095 | Canola | cytosol | 38.49 | 41.48 |
| CDY14862 | Canola | plastid | 36.77 | 41.0 |
| CDY70947 | Canola | plastid | 36.43 | 40.61 |
| CDX96613 | Canola | nucleus | 41.58 | 40.2 |
| CDX85952 | Canola | cytosol | 37.46 | 40.07 |
| CDY45266 | Canola | plastid | 28.18 | 40.0 |
| CDY68242 | Canola | plastid | 40.55 | 39.73 |
| CDY60321 | Canola | plastid | 40.21 | 39.53 |
| CDY41211 | Canola | plastid | 39.86 | 39.32 |
| CDY53687 | Canola | nucleus | 40.21 | 39.26 |
| CDY33658 | Canola | nucleus | 38.83 | 38.7 |
| CDY21451 | Canola | cytosol | 32.3 | 38.37 |
| CDY31511 | Canola | nucleus | 35.4 | 38.29 |
| CDX83182 | Canola | cytosol | 31.96 | 37.96 |
| CDX76085 | Canola | plastid | 39.86 | 37.78 |
| CDY02949 | Canola | plastid | 39.52 | 37.46 |
| CDY29494 | Canola | nucleus | 35.05 | 37.23 |
| CDY01347 | Canola | nucleus | 34.71 | 37.13 |
| CDY31858 | Canola | nucleus | 34.71 | 37.0 |
| CDY65376 | Canola | nucleus | 28.52 | 30.18 |
Protein Annotations
| EnsemblPlants:CDX78802 | EnsemblPlantsGene:GSBRNA2T00131269001 | Gene3D:3.30.1330.80 | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31100 |
| PANTHER:PTHR31100:SF14 | PFAM:PF03479 | PFscan:PS51742 | ProteinID:CDX78802 | ProteinID:CDX78802.1 | SEG:seg |
| SUPFAM:SSF117856 | UniParc:UPI0004EF4190 | MapMan:35.1 | : | : | : |
Description
BnaA01g08690D
Coordinates
chrLK031816:-:123456..124331
Molecular Weight (calculated)
29314.4 Da
IEP (calculated)
6.224
GRAVY (calculated)
-0.168
Length
291 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGLDLGTAF GYVNHQLHRP DLHLHHSSAS DDVTPGAGLG HFTVDDDDNN HQGLDLASGG GSGSSGGGGG DGGGGGNVVG RRPRGRPPGS KNKPKPPVII
101: TRESANTLRA HILEVTSGCD VFDCVATYAR RRQRGICVLS GSGTVTNVTI RQPSAAGAVV TLQGTFEILS LSGSFLPPPA PPGATSLTIF LAGGQGQVVG
201: GSVVGELTAA GPVIVIASSF TNVAYERLPL EEDEQQHLGG GGGSNGGGNL FPEVSAGGGG LPFFNLPMNM QPNVQLPVEG WPGNSGGRGP F
101: TRESANTLRA HILEVTSGCD VFDCVATYAR RRQRGICVLS GSGTVTNVTI RQPSAAGAVV TLQGTFEILS LSGSFLPPPA PPGATSLTIF LAGGQGQVVG
201: GSVVGELTAA GPVIVIASSF TNVAYERLPL EEDEQQHLGG GGGSNGGGNL FPEVSAGGGG LPFFNLPMNM QPNVQLPVEG WPGNSGGRGP F
001: MAGLDLGTAF RYVNHQLHRP DLHLHHNSSS DDVTPGAGMG HFTVDDEDNN NNHQGLDLAS GGGSGSSGGG GGHGGGGDVV GRRPRGRPPG SKNKPKPPVI
101: ITRESANTLR AHILEVTNGC DVFDCVATYA RRRQRGICVL SGSGTVTNVS IRQPSAAGAV VTLQGTFEIL SLSGSFLPPP APPGATSLTI FLAGGQGQVV
201: GGSVVGELTA AGPVIVIAAS FTNVAYERLP LEEDEQQQQL GGGSNGGGNL FPEVAAGGGG GLPFFNLPMN MQPNVQLPVE GWPGNSGGRG PF
101: ITRESANTLR AHILEVTNGC DVFDCVATYA RRRQRGICVL SGSGTVTNVS IRQPSAAGAV VTLQGTFEIL SLSGSFLPPP APPGATSLTI FLAGGQGQVV
201: GGSVVGELTA AGPVIVIAAS FTNVAYERLP LEEDEQQQQL GGGSNGGGNL FPEVAAGGGG GLPFFNLPMN MQPNVQLPVE GWPGNSGGRG PF
Arabidopsis Description
AHL23AT-hook motif nuclear-localized protein 23 [Source:UniProtKB/Swiss-Prot;Acc:O23620]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.