Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- cytosol 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026211.1-P | Field mustard | plastid | 99.51 | 99.51 |
| CDY65376 | Canola | nucleus | 92.68 | 69.09 |
| AT1G14490.2 | Thale cress | plastid | 66.83 | 60.89 |
| CDY21451 | Canola | cytosol | 72.68 | 60.82 |
| CDX83182 | Canola | cytosol | 72.2 | 60.41 |
| GSMUA_Achr7P19000_001 | Banana | cytosol, plasma membrane, plastid | 40.0 | 44.09 |
| KRH62181 | Soybean | nucleus | 57.07 | 41.79 |
| KRH72453 | Soybean | nucleus | 55.12 | 41.7 |
| KRH52892 | Soybean | nucleus | 57.07 | 41.2 |
| PGSC0003DMT400024250 | Potato | cytosol, plastid | 53.66 | 40.89 |
| KRH16838 | Soybean | nucleus | 48.78 | 39.06 |
| GSMUA_Achr8P23410_001 | Banana | cytosol | 38.05 | 38.05 |
| PGSC0003DMT400005182 | Potato | nucleus | 49.27 | 37.69 |
| Solyc12g087950.1.1 | Tomato | nucleus | 47.8 | 36.84 |
| VIT_18s0001g07380.t01 | Wine grape | nucleus | 42.44 | 35.51 |
| GSMUA_Achr10P... | Banana | nucleus | 47.8 | 35.13 |
| GSMUA_Achr3P06770_001 | Banana | cytosol | 37.56 | 33.92 |
| Solyc04g076220.2.1 | Tomato | nucleus | 53.66 | 32.74 |
| CDX79599 | Canola | cytosol, peroxisome, plastid | 40.0 | 30.04 |
| CDY72485 | Canola | nucleus | 40.0 | 30.04 |
| CDY59041 | Canola | cytosol, nucleus, peroxisome | 41.46 | 29.72 |
| CDX90445 | Canola | plastid | 39.51 | 29.56 |
| CDY41211 | Canola | plastid | 41.46 | 28.81 |
| CDY20404 | Canola | nucleus | 38.05 | 28.78 |
| CDY12779 | Canola | cytosol, nucleus, vacuole | 39.51 | 28.72 |
| CDY23160 | Canola | cytosol, nucleus, vacuole | 39.02 | 28.67 |
| CDY68242 | Canola | plastid | 41.46 | 28.62 |
| CDY60321 | Canola | plastid | 40.98 | 28.38 |
| CDY53687 | Canola | nucleus | 40.98 | 28.19 |
| CDX78802 | Canola | cytosol | 40.0 | 28.18 |
| CDY45983 | Canola | nucleus | 39.51 | 28.12 |
| CDX79838 | Canola | plastid | 35.61 | 28.08 |
| CDY53650 | Canola | plastid | 35.61 | 28.08 |
| GSMUA_AchrUn_... | Banana | nucleus | 45.85 | 28.06 |
| CDY54780 | Canola | cytosol | 39.51 | 27.74 |
| CDX87591 | Canola | nucleus | 37.56 | 27.5 |
| CDY70947 | Canola | plastid | 34.63 | 27.2 |
| CDX76085 | Canola | plastid | 40.49 | 27.04 |
| CDY02949 | Canola | plastid | 40.49 | 27.04 |
| CDY14862 | Canola | plastid | 34.15 | 26.82 |
| Os09t0464300-00 | Rice | nucleus | 43.41 | 26.65 |
| CDY37040 | Canola | nucleus | 40.0 | 26.62 |
| CDY18931 | Canola | nucleus | 40.0 | 26.54 |
| CDX74739 | Canola | nucleus | 40.0 | 26.45 |
| Zm00001d020768_P001 | Maize | cytosol | 42.93 | 26.43 |
| CDY27387 | Canola | nucleus | 40.0 | 26.28 |
| CDX88286 | Canola | cytosol, endoplasmic reticulum, nucleus | 35.12 | 26.09 |
| CDY21124 | Canola | cytosol, endoplasmic reticulum, peroxisome | 36.59 | 26.04 |
| Os08t0478466-01 | Rice | nucleus | 40.98 | 25.93 |
| CDX98771 | Canola | nucleus | 40.0 | 25.87 |
| CDY64701 | Canola | nucleus | 39.02 | 25.72 |
| CDX82978 | Canola | cytosol, nucleus, plastid | 39.51 | 25.71 |
| CDY41289 | Canola | nucleus | 39.51 | 25.71 |
| TraesCS5D01G252500.1 | Wheat | cytosol | 41.95 | 25.67 |
| CDY30003 | Canola | cytosol, nucleus, peroxisome, plastid | 36.1 | 25.61 |
| TraesCS5B01G243200.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 41.95 | 25.6 |
| Zm00001d005923_P001 | Maize | nucleus | 42.44 | 25.29 |
| Zm00001d031826_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 36.1 | 25.17 |
| CDY49327 | Canola | cytosol, endoplasmic reticulum, nucleus | 38.54 | 25.16 |
| CDX94128 | Canola | nucleus | 40.0 | 25.08 |
| CDX84222 | Canola | cytosol | 23.41 | 25.0 |
| TraesCS5A01G245800.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 41.46 | 25.0 |
| KXG25333 | Sorghum | cytosol | 40.49 | 24.92 |
| CDX69136 | Canola | cytosol, nucleus, peroxisome | 36.59 | 24.83 |
| CDX75499 | Canola | cytosol, nucleus, peroxisome | 36.1 | 24.5 |
| CDY04391 | Canola | nucleus | 39.02 | 24.46 |
| CDX68095 | Canola | cytosol | 32.2 | 24.44 |
| CDY31677 | Canola | cytosol | 23.41 | 24.37 |
| OQU89633 | Sorghum | cytosol | 41.95 | 24.29 |
| CDX85952 | Canola | cytosol | 32.2 | 24.26 |
| CDX96613 | Canola | nucleus | 35.12 | 23.92 |
| CDY33658 | Canola | nucleus | 33.17 | 23.29 |
| CDY31511 | Canola | nucleus | 29.27 | 22.3 |
| CDY01347 | Canola | nucleus | 28.78 | 21.69 |
| CDY31858 | Canola | nucleus | 28.78 | 21.61 |
| CDY29494 | Canola | nucleus | 28.78 | 21.53 |
Protein Annotations
| EnsemblPlants:CDY45266 | EnsemblPlantsGene:GSBRNA2T00081708001 | Gene3D:3.30.1330.80 | InterPro:AT-hook_nuclear | InterPro:IPR005175 | InterPro:PPC_dom |
| PANTHER:PTHR31100 | PANTHER:PTHR31100:SF1 | PFAM:PF03479 | PFscan:PS51742 | PIRSF:PIRSF016021 | ProteinID:CDY45266 |
| ProteinID:CDY45266.1 | SEG:seg | SUPFAM:SSF117856 | UniParc:UPI0004EEE07C | UniProt:A0A078I5S6 | MapMan:35.1 |
Description
BnaA06g09360DBnaA06g09360D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I5S6]
Coordinates
chrLK032619:-:42422..43039
Molecular Weight (calculated)
21242.3 Da
IEP (calculated)
8.479
GRAVY (calculated)
-0.121
Length
205 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPIQRQRPR GRPQGSKNKP KPPVFLTVEP PMSPYILQVP SGNDVVASIN RFCRERSIGL CLLSGSGSVA DVTLRQPPPA PPGSTITFHG KFDLLSVSAA
101: FLPPPVSSSF TVSLAGPQGQ IIGGFVSGPL ISAGPVYVVA ASLNNPSYYR LPAEVKQENS SASAEAEEGK GQSPPVSGGG GESCHIEGSD VVWTPAAGIL
201: TKPSL
101: FLPPPVSSSF TVSLAGPQGQ IIGGFVSGPL ISAGPVYVVA ASLNNPSYYR LPAEVKQENS SASAEAEEGK GQSPPVSGGG GESCHIEGSD VVWTPAAGIL
201: TKPSL
001: MKGEYREQKS NEMFSKLPHH QQQQQQQQQQ HSLTSHFHLS STVTPTVDDS SIEVVRRPRG RPPGSKNKPK PPVFVTRDTD PPMSPYILEV PSGNDVVEAI
101: NRFCRRKSIG VCVLSGSGSV ANVTLRQPSP AALGSTITFH GKFDLLSVSA TFLPPPPRTS LSPPVSNFFT VSLAGPQGQI IGGFVAGPLI SAGTVYVIAA
201: SFNNPSYHRL PAEEEQKHSA GTGEREGQSP PVSGGGEESG QMAGSGGESC GVSMYSCHMG GSDVIWAPTA RAPPPY
101: NRFCRRKSIG VCVLSGSGSV ANVTLRQPSP AALGSTITFH GKFDLLSVSA TFLPPPPRTS LSPPVSNFFT VSLAGPQGQI IGGFVAGPLI SAGTVYVIAA
201: SFNNPSYHRL PAEEEQKHSA GTGEREGQSP PVSGGGEESG QMAGSGGESC GVSMYSCHMG GSDVIWAPTA RAPPPY
Arabidopsis Description
AHL17AT-hook motif nuclear-localized protein 17 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTA2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.