Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d031826_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 70.57 | 79.93 |
| Os08t0478466-01 | Rice | nucleus | 57.66 | 59.26 |
| GSMUA_Achr7P19000_001 | Banana | cytosol, plasma membrane, plastid | 32.73 | 58.6 |
| GSMUA_Achr8P23410_001 | Banana | cytosol | 32.13 | 52.2 |
| OQU89633 | Sorghum | cytosol | 54.05 | 50.85 |
| GSMUA_Achr10P... | Banana | nucleus | 41.14 | 49.1 |
| GSMUA_Achr3P06770_001 | Banana | cytosol | 31.23 | 45.81 |
| GSMUA_AchrUn_... | Banana | nucleus | 44.14 | 43.88 |
| AT1G14490.2 | Thale cress | plastid | 28.23 | 41.78 |
| KRH72453 | Soybean | nucleus | 33.03 | 40.59 |
| CDY45266 | Canola | plastid | 24.92 | 40.49 |
| Bra026211.1-P | Field mustard | plastid | 24.92 | 40.49 |
| CDY21451 | Canola | cytosol | 29.73 | 40.41 |
| CDX83182 | Canola | cytosol | 29.43 | 40.0 |
| KRH62181 | Soybean | nucleus | 33.03 | 39.29 |
| VIT_18s0001g07380.t01 | Wine grape | nucleus | 28.83 | 39.18 |
| KRH52892 | Soybean | nucleus | 33.33 | 39.08 |
| KXG25365 | Sorghum | nucleus | 31.23 | 38.52 |
| Bra000593.1-P | Field mustard | cytosol | 30.33 | 38.4 |
| KRH16838 | Soybean | nucleus | 29.13 | 37.89 |
| AT5G49700.1 | Thale cress | nucleus | 31.23 | 37.68 |
| PGSC0003DMT400024250 | Potato | cytosol, plastid | 30.33 | 37.55 |
| OQU88209 | Sorghum | peroxisome | 27.33 | 36.4 |
| EER95114 | Sorghum | nucleus | 29.73 | 36.4 |
| Solyc04g076220.2.1 | Tomato | nucleus | 33.33 | 33.04 |
| OQU85972 | Sorghum | cytosol | 29.13 | 32.66 |
| EES05630 | Sorghum | cytosol, mitochondrion, nucleus, plastid | 32.13 | 32.62 |
| KXG24494 | Sorghum | nucleus | 29.13 | 32.55 |
| EES12751 | Sorghum | cytosol, nucleus, peroxisome | 30.33 | 32.37 |
| EER88668 | Sorghum | cytosol | 26.13 | 32.22 |
| Solyc12g087950.1.1 | Tomato | nucleus | 25.53 | 31.95 |
| CDY65376 | Canola | nucleus | 26.13 | 31.64 |
| PGSC0003DMT400005182 | Potato | nucleus | 25.23 | 31.34 |
| EER99980 | Sorghum | plastid | 19.82 | 31.28 |
| KXG19929 | Sorghum | nucleus | 27.63 | 28.93 |
| EES04848 | Sorghum | nucleus | 27.93 | 28.44 |
| EER89149 | Sorghum | cytosol, nucleus, plastid | 29.73 | 28.37 |
Protein Annotations
| EnsemblPlants:KXG25333 | EnsemblPlantsGene:SORBI_3007G159800 | Gene3D:3.30.1330.80 | InterPro:IPR005175 | InterPro:PPC_dom | PANTHER:PTHR31100 |
| PANTHER:PTHR31100:SF1 | PFAM:PF03479 | PFscan:PS51742 | ProteinID:KXG25333 | ProteinID:KXG25333.1 | SEG:seg |
| SUPFAM:SSF117856 | TMHMM:TMhelix | UniParc:UPI0003C65E85 | UniProt:A0A1B6PI24 | MapMan:35.2 | : |
Description
hypothetical protein
Coordinates
chr7:-:59410962..59417573
Molecular Weight (calculated)
33968.8 Da
IEP (calculated)
7.199
GRAVY (calculated)
-0.350
Length
333 amino acids
Sequence
(BLAST)
(BLAST)
001: MDREGLYGGR GDGSRLLVVQ DLHERPMECF SDEVNSRNGC GDDEEEEEGN GGTGSGSGSR PLPAPNGAGG GGGDGPVSVE TGKRRRGRPP GSKNKPKPPP
101: VVTRDVEPAA AMRPHVLEIP SGGDVARALA GFARRRGLGI CVLAGTGAVA DVSLRHPAAS SSADGGGGGA AAAAAAVVVF RGRYEILSIS ATFLAPSMSA
201: AVPARSAVSR DLSISLAGPH GQIVGGAVVG PLVAATTVVV LAAAFTDLNF HRLPLEDDAS AASVSGSGEA GEHRHRGHHG QHQQREHHDA SGLHPQTMVA
301: PATTQPVPLY ARQSQELWPP AAASAQRPRP PYQ
101: VVTRDVEPAA AMRPHVLEIP SGGDVARALA GFARRRGLGI CVLAGTGAVA DVSLRHPAAS SSADGGGGGA AAAAAAVVVF RGRYEILSIS ATFLAPSMSA
201: AVPARSAVSR DLSISLAGPH GQIVGGAVVG PLVAATTVVV LAAAFTDLNF HRLPLEDDAS AASVSGSGEA GEHRHRGHHG QHQQREHHDA SGLHPQTMVA
301: PATTQPVPLY ARQSQELWPP AAASAQRPRP PYQ
001: MKGEYREQKS NEMFSKLPHH QQQQQQQQQQ HSLTSHFHLS STVTPTVDDS SIEVVRRPRG RPPGSKNKPK PPVFVTRDTD PPMSPYILEV PSGNDVVEAI
101: NRFCRRKSIG VCVLSGSGSV ANVTLRQPSP AALGSTITFH GKFDLLSVSA TFLPPPPRTS LSPPVSNFFT VSLAGPQGQI IGGFVAGPLI SAGTVYVIAA
201: SFNNPSYHRL PAEEEQKHSA GTGEREGQSP PVSGGGEESG QMAGSGGESC GVSMYSCHMG GSDVIWAPTA RAPPPY
101: NRFCRRKSIG VCVLSGSGSV ANVTLRQPSP AALGSTITFH GKFDLLSVSA TFLPPPPRTS LSPPVSNFFT VSLAGPQGQI IGGFVAGPLI SAGTVYVIAA
201: SFNNPSYHRL PAEEEQKHSA GTGEREGQSP PVSGGGEESG QMAGSGGESC GVSMYSCHMG GSDVIWAPTA RAPPPY
Arabidopsis Description
AHL17AT-hook motif nuclear-localized protein 17 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTA2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.