Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- cytosol 2
- mitochondrion 2
- plasma membrane 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P19000_001 | Banana | cytosol, plasma membrane, plastid | 69.76 | 76.88 |
| GSMUA_Achr3P06770_001 | Banana | cytosol | 66.83 | 60.35 |
| GSMUA_Achr10P... | Banana | nucleus | 66.34 | 48.75 |
| GSMUA_AchrUn_... | Banana | nucleus | 73.17 | 44.78 |
| GSMUA_AchrUn_... | Banana | cytosol | 36.1 | 44.31 |
| GSMUA_Achr11P... | Banana | cytosol | 33.66 | 40.12 |
| Bra026211.1-P | Field mustard | plastid | 38.05 | 38.05 |
| CDY45266 | Canola | plastid | 38.05 | 38.05 |
| AT1G14490.2 | Thale cress | plastid | 41.46 | 37.78 |
| Os09t0464300-00 | Rice | nucleus | 60.0 | 36.83 |
| TraesCS5D01G252500.1 | Wheat | cytosol | 58.54 | 35.82 |
| Zm00001d020768_P001 | Maize | cytosol | 58.05 | 35.74 |
| TraesCS5B01G243200.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 58.54 | 35.71 |
| CDY21451 | Canola | cytosol | 42.44 | 35.51 |
| CDX83182 | Canola | cytosol | 42.44 | 35.51 |
| KRH62181 | Soybean | nucleus | 48.29 | 35.36 |
| Bra000593.1-P | Field mustard | cytosol | 44.88 | 34.98 |
| PGSC0003DMT400024250 | Potato | cytosol, plastid | 45.85 | 34.94 |
| KRH52892 | Soybean | nucleus | 48.29 | 34.86 |
| TraesCS5A01G245800.1 | Wheat | cytosol, endoplasmic reticulum, nucleus | 57.56 | 34.71 |
| Os08t0478466-01 | Rice | nucleus | 54.63 | 34.57 |
| OQU89633 | Sorghum | cytosol | 59.02 | 34.18 |
| Zm00001d005923_P001 | Maize | nucleus | 56.1 | 33.43 |
| AT5G49700.1 | Thale cress | nucleus | 44.88 | 33.33 |
| KRH72453 | Soybean | nucleus | 43.9 | 33.21 |
| Zm00001d031826_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 47.32 | 32.99 |
| KRH16838 | Soybean | nucleus | 40.49 | 32.42 |
| KXG25333 | Sorghum | cytosol | 52.2 | 32.13 |
| GSMUA_Achr2P04080_001 | Banana | cytosol | 36.59 | 31.91 |
| PGSC0003DMT400005182 | Potato | nucleus | 38.54 | 29.48 |
| VIT_18s0001g07380.t01 | Wine grape | nucleus | 35.12 | 29.39 |
| CDY65376 | Canola | nucleus | 39.02 | 29.09 |
| Solyc12g087950.1.1 | Tomato | nucleus | 37.56 | 28.95 |
| Solyc04g076220.2.1 | Tomato | nucleus | 46.34 | 28.27 |
| GSMUA_Achr5P19550_001 | Banana | cytosol | 37.07 | 28.15 |
| GSMUA_Achr9P23390_001 | Banana | plastid | 34.63 | 27.95 |
| GSMUA_Achr9P12320_001 | Banana | plastid | 38.05 | 27.76 |
| GSMUA_Achr6P04980_001 | Banana | cytosol, nucleus, plastid | 36.59 | 26.13 |
| GSMUA_Achr8P14790_001 | Banana | plastid | 35.12 | 25.81 |
| GSMUA_Achr5P28720_001 | Banana | mitochondrion, peroxisome, plastid | 32.68 | 25.57 |
| GSMUA_Achr7P10630_001 | Banana | plastid | 35.61 | 25.09 |
| GSMUA_Achr6P01060_001 | Banana | nucleus | 34.15 | 25.0 |
| GSMUA_Achr9P28280_001 | Banana | plastid | 36.1 | 24.67 |
| GSMUA_Achr11P... | Banana | nucleus | 34.15 | 23.81 |
| GSMUA_Achr1P19850_001 | Banana | nucleus | 34.63 | 23.13 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, vacuole | 33.66 | 22.62 |
| GSMUA_Achr5P03390_001 | Banana | nucleus | 28.29 | 22.39 |
| GSMUA_Achr3P27580_001 | Banana | cytosol, nucleus, plastid | 27.32 | 22.31 |
| GSMUA_Achr2P04780_001 | Banana | cytosol, nucleus, plastid | 27.32 | 21.96 |
| GSMUA_Achr1P08290_001 | Banana | nucleus | 32.68 | 21.82 |
| GSMUA_Achr7P15000_001 | Banana | nucleus | 29.27 | 21.51 |
| GSMUA_Achr2P03140_001 | Banana | cytosol, nucleus, vacuole | 32.2 | 21.36 |
| GSMUA_Achr5P13920_001 | Banana | nucleus | 16.1 | 14.54 |
| GSMUA_Achr3P11300_001 | Banana | nucleus | 13.17 | 11.79 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P23410_001 | EnsemblPlants:GSMUA_Achr8T23410_001 | EnsemblPlantsGene:GSMUA_Achr8G23410_001 | Gene3D:3.30.1330.80 | InterPro:AT-hook_nuclear | InterPro:IPR005175 |
| InterPro:PPC_dom | PANTHER:PTHR31100 | PANTHER:PTHR31100:SF1 | PFAM:PF03479 | PFscan:PS51742 | PIRSF:PIRSF016021 |
| SEG:seg | SUPFAM:SSF117856 | UniParc:UPI000294B39C | UniProt:M0TSZ4 | MapMan:35.1 | : |
Description
DNA binding protein, putative [Source:GMGC_GENE;Acc:GSMUA_Achr8G23410_001]
Coordinates
chr8:-:27905941..27906558
Molecular Weight (calculated)
21197.3 Da
IEP (calculated)
6.843
GRAVY (calculated)
0.024
Length
205 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPHVLEIPA GHDVAQSLAH FARRRNLGIC VLAGTGSVAN VALRQPHFGG APPPPQAATI GFRGRFEILS ISATFLPPAM AAVSPRIGGE ISISLAGPQG
101: QVVGGTVAGP LIAAGTVVVV SAAFSNPTFH RLPVEDNVSI SVSISGGGQG GEAEEHEPHV HHQHQQQRCH DGTAAESCGM SIYGDHLMSD VIWPPSAHPP
201: PPPPF
101: QVVGGTVAGP LIAAGTVVVV SAAFSNPTFH RLPVEDNVSI SVSISGGGQG GEAEEHEPHV HHQHQQQRCH DGTAAESCGM SIYGDHLMSD VIWPPSAHPP
201: PPPPF
001: MKGEYREQKS NEMFSKLPHH QQQQQQQQQQ HSLTSHFHLS STVTPTVDDS SIEVVRRPRG RPPGSKNKPK PPVFVTRDTD PPMSPYILEV PSGNDVVEAI
101: NRFCRRKSIG VCVLSGSGSV ANVTLRQPSP AALGSTITFH GKFDLLSVSA TFLPPPPRTS LSPPVSNFFT VSLAGPQGQI IGGFVAGPLI SAGTVYVIAA
201: SFNNPSYHRL PAEEEQKHSA GTGEREGQSP PVSGGGEESG QMAGSGGESC GVSMYSCHMG GSDVIWAPTA RAPPPY
101: NRFCRRKSIG VCVLSGSGSV ANVTLRQPSP AALGSTITFH GKFDLLSVSA TFLPPPPRTS LSPPVSNFFT VSLAGPQGQI IGGFVAGPLI SAGTVYVIAA
201: SFNNPSYHRL PAEEEQKHSA GTGEREGQSP PVSGGGEESG QMAGSGGESC GVSMYSCHMG GSDVIWAPTA RAPPPY
Arabidopsis Description
AHL17AT-hook motif nuclear-localized protein 17 [Source:UniProtKB/Swiss-Prot;Acc:Q9LTA2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.