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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 3
  • plasma membrane 1
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plasma membrane, plastid
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:cytosol
Plant-mPloc:plasma membrane, plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
GSMUA_Achr5P05900_001
GSMUA_Achr7P12530_001
GSMUA_Achr9P15630_001

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G14465.1 GSMUA_Achr5P05900_001 AT3G17860.1 21798944
AT4G14465.1 GSMUA_Achr7P12530_001 AT3G17860.1 21798944
AT4G14465.1 GSMUA_Achr9P15630_001 AT3G17860.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_AchrUn_... Banana cytosol 65.7 67.66
GSMUA_Achr2P04080_001 Banana cytosol 69.19 50.64
GSMUA_Achr5P19550_001 Banana cytosol 78.49 50.0
Os07t0235200-01 Rice endoplasmic reticulum, extracellular 53.49 48.68
Zm00001d018508_P001 Maize cytosol 69.19 48.57
VIT_05s0049g00100.t01 Wine grape cytosol 73.26 48.46
KRG90376 Soybean nucleus 73.26 47.01
Os08t0563200-01 Rice cytosol 63.95 46.81
KRH31728 Soybean cytosol 73.26 46.67
TraesCS4B01G001100.1 Wheat cytosol, nucleus, peroxisome 67.44 46.4
Os02t0820800-00 Rice cytosol, nucleus, peroxisome 70.35 45.49
Zm00001d031887_P001 Maize nucleus 69.19 44.24
KXG25365 Sorghum nucleus 69.19 44.07
Zm00001d049906_P001 Maize nucleus 66.28 43.02
Solyc09g089620.1.1 Tomato nucleus 71.51 43.01
PGSC0003DMT400044451 Potato nucleus 70.93 42.81
KRH34516 Soybean cytosol, nucleus, peroxisome 69.77 41.38
CDY23160 Canola cytosol, nucleus, vacuole 66.86 41.22
CDY12779 Canola cytosol, nucleus, vacuole 66.86 40.78
HORVU4Hr1G000870.2 Barley nucleus 68.02 40.77
TraesCS4A01G312400.1 Wheat nucleus 67.44 40.7
HORVU6Hr1G010470.2 Barley cytosol, nucleus, peroxisome 66.28 40.57
TraesCS6A01G053800.1 Wheat nucleus 66.28 40.43
OQU85972 Sorghum cytosol 69.77 40.4
TraesCS4D01G001800.1 Wheat nucleus 66.86 40.35
TraesCS6A01G399200.1 Wheat cytosol, extracellular, peroxisome 68.02 40.34
TraesCS6D01G383400.1 Wheat cytosol, extracellular, peroxisome 68.02 40.34
TraesCS6B01G072300.1 Wheat nucleus 65.7 40.07
HORVU6Hr1G091740.1 Barley cytosol 68.02 40.07
TraesCS6B01G439500.1 Wheat cytosol, extracellular, peroxisome 68.02 39.93
AT4G14465.1 Thale cress cytosol, nucleus, plastid 65.12 39.86
GSMUA_Achr7P19000_001 Banana cytosol, plasma membrane, plastid 43.02 39.78
TraesCS6D01G055500.1 Wheat cytosol 65.12 39.72
KRG92293 Soybean cytosol, mitochondrion, nucleus 68.02 38.61
GSMUA_Achr5P28720_001 Banana mitochondrion, peroxisome, plastid 58.14 38.17
GSMUA_Achr9P23390_001 Banana plastid 54.65 37.01
GSMUA_Achr7P10630_001 Banana plastid 56.98 33.68
GSMUA_Achr8P23410_001 Banana cytosol 40.12 33.66
GSMUA_Achr6P01060_001 Banana nucleus 54.65 33.57
GSMUA_Achr9P12320_001 Banana plastid 53.49 32.74
GSMUA_Achr11P... Banana nucleus 55.81 32.65
GSMUA_Achr8P14790_001 Banana plastid 52.33 32.26
GSMUA_Achr10P... Banana cytosol, nucleus, vacuole 56.4 31.8
GSMUA_Achr3P06770_001 Banana cytosol 41.86 31.72
GSMUA_Achr1P19850_001 Banana nucleus 56.4 31.6
GSMUA_Achr9P28280_001 Banana plastid 54.65 31.33
GSMUA_Achr2P03140_001 Banana cytosol, nucleus, vacuole 55.81 31.07
GSMUA_Achr6P04980_001 Banana cytosol, nucleus, plastid 51.74 31.01
GSMUA_Achr1P08290_001 Banana nucleus 51.74 28.99
GSMUA_Achr3P27580_001 Banana cytosol, nucleus, plastid 41.86 28.69
GSMUA_Achr7P15000_001 Banana nucleus 45.35 27.96
GSMUA_Achr5P03390_001 Banana nucleus 40.7 27.03
GSMUA_Achr2P04780_001 Banana cytosol, nucleus, plastid 39.53 26.67
GSMUA_Achr10P... Banana nucleus 42.44 26.16
GSMUA_Achr5P13920_001 Banana nucleus 26.74 20.26
GSMUA_AchrUn_... Banana nucleus 36.63 18.81
HORVU0Hr1G011700.1 Barley cytosol 22.09 17.59
GSMUA_Achr3P11300_001 Banana nucleus 22.09 16.59
Protein Annotations
EnsemblPlants:GSMUA_Achr11P21990_001EnsemblPlants:GSMUA_Achr11T21990_001EnsemblPlantsGene:GSMUA_Achr11G21990_001Gene3D:3.30.1330.80InterPro:IPR005175InterPro:PPC_dom
PANTHER:PTHR31100PANTHER:PTHR31100:SF3PFAM:PF03479PFscan:PS51742SEG:segSUPFAM:SSF117856
UniParc:UPI000295203CUniProt:M0RUC9MapMan:35.1:::
Description
DNA binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr11G21990_001]
Coordinates
chr11:-:22414787..22415305
Molecular Weight (calculated)
17626.2 Da
IEP (calculated)
4.449
GRAVY (calculated)
0.190
Length
172 amino acids
Sequence
(BLAST)
001: MEVAGGADVA ECIAQFARRR QCGVSVLSGV GTVANVTLRQ PAAPGAVVTM HGRFEILSLT GTFLPGPALP GSTGLTVYLA GEQCQVLGGS VVGSLLATGP
101: VMVVATTFGN ATYERLPLEG EEEVEEEEAG SGGGLLDPSL LSMYNLPPNL IPDGGQLAHD AIARAHARRP PY
Best Arabidopsis Sequence Match ( AT4G14465.1 )
(BLAST)
001: MANPWWTNQS GLAGMVDHSV SSGHHQNHHH QSLLTKGDLG IAMNQSQDND QDEEDDPREG AVEVVNRRPR GRPPGSKNKP KAPIFVTRDS PNALRSHVLE
101: ISDGSDVADT IAHFSRRRQR GVCVLSGTGS VANVTLRQAA APGGVVSLQG RFEILSLTGA FLPGPSPPGS TGLTVYLAGV QGQVVGGSVV GPLLAIGSVM
201: VIAATFSNAT YERLPMEEEE DGGGSRQIHG GGDSPPRIGS NLPDLSGMAG PGYNMPPHLI PNGAGQLGHE PYTWVHARPP Y
Arabidopsis Description
AHL20AT-hook motif nuclear-localized protein 20 [Source:UniProtKB/Swiss-Prot;Acc:Q8GWQ2]
SUBAcon: [plastid,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.