Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- plastid 1
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_15s0048g00780.t01 | Wine grape | nucleus | 62.22 | 63.67 |
| GSMUA_Achr2P03140_001 | Banana | cytosol, nucleus, vacuole | 60.91 | 60.52 |
| KRH76289 | Soybean | nucleus | 56.68 | 60.42 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, vacuole | 59.93 | 60.33 |
| GSMUA_Achr1P08290_001 | Banana | nucleus | 59.93 | 59.93 |
| KRH65251 | Soybean | nucleus | 59.28 | 58.71 |
| GSMUA_AchrUn_... | Banana | cytosol | 31.92 | 58.68 |
| Solyc01g091470.2.1 | Tomato | nucleus | 57.33 | 58.28 |
| PGSC0003DMT400033248 | Potato | nucleus | 57.98 | 57.79 |
| GSMUA_Achr11P... | Banana | cytosol | 31.6 | 56.4 |
| GSMUA_Achr9P23390_001 | Banana | plastid | 46.58 | 56.3 |
| CDY18931 | Canola | nucleus | 55.37 | 55.02 |
| Bra039338.1-P | Field mustard | nucleus | 55.05 | 54.87 |
| CDY37040 | Canola | nucleus | 54.72 | 54.55 |
| CDX74739 | Canola | nucleus | 55.05 | 54.52 |
| AT2G45430.1 | Thale cress | nucleus | 56.03 | 54.26 |
| Bra004911.1-P | Field mustard | nucleus | 54.4 | 54.22 |
| CDY27387 | Canola | nucleus | 55.05 | 54.17 |
| GSMUA_Achr3P11300_001 | Banana | nucleus | 40.39 | 54.15 |
| GSMUA_Achr2P04080_001 | Banana | cytosol | 41.37 | 54.04 |
| GSMUA_Achr5P28720_001 | Banana | mitochondrion, peroxisome, plastid | 45.93 | 53.82 |
| AT3G60870.1 | Thale cress | nucleus | 46.25 | 53.58 |
| GSMUA_Achr8P14790_001 | Banana | plastid | 47.56 | 52.33 |
| GSMUA_Achr5P19550_001 | Banana | cytosol | 44.95 | 51.11 |
| GSMUA_Achr3P27580_001 | Banana | cytosol, nucleus, plastid | 41.69 | 51.0 |
| GSMUA_Achr11P... | Banana | nucleus | 47.56 | 49.66 |
| GSMUA_Achr5P03390_001 | Banana | nucleus | 40.72 | 48.26 |
| GSMUA_Achr6P01060_001 | Banana | nucleus | 43.97 | 48.21 |
| GSMUA_Achr6P04980_001 | Banana | cytosol, nucleus, plastid | 43.65 | 46.69 |
| GSMUA_Achr7P10630_001 | Banana | plastid | 43.65 | 46.05 |
| GSMUA_Achr2P04780_001 | Banana | cytosol, nucleus, plastid | 38.11 | 45.88 |
| GSMUA_Achr7P15000_001 | Banana | nucleus | 41.37 | 45.52 |
| GSMUA_Achr9P28280_001 | Banana | plastid | 43.97 | 45.0 |
| GSMUA_Achr5P13920_001 | Banana | nucleus | 31.6 | 42.73 |
| GSMUA_Achr9P12320_001 | Banana | plastid | 38.44 | 41.99 |
| GSMUA_Achr7P19000_001 | Banana | cytosol, plasma membrane, plastid | 25.08 | 41.4 |
| GSMUA_Achr10P... | Banana | nucleus | 32.57 | 35.84 |
| GSMUA_Achr8P23410_001 | Banana | cytosol | 23.13 | 34.63 |
| GSMUA_Achr3P06770_001 | Banana | cytosol | 22.48 | 30.4 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.97 | 27.46 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P19850_001 | EnsemblPlants:GSMUA_Achr1T19850_001 | EnsemblPlantsGene:GSMUA_Achr1G19850_001 | Gene3D:3.30.1330.80 | InterPro:IPR005175 | InterPro:PPC_dom |
| PANTHER:PTHR31100 | PANTHER:PTHR31100:SF15 | PFAM:PF03479 | PFscan:PS51742 | SEG:seg | SUPFAM:SSF117856 |
| UniParc:UPI000294B166 | UniProt:M0S1E3 | MapMan:35.1 | : | : | : |
Description
DNA binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr1G19850_001]
Coordinates
chr1:+:14901245..14902168
Molecular Weight (calculated)
32440.4 Da
IEP (calculated)
7.117
GRAVY (calculated)
-0.415
Length
307 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPMTASTHG YHLPPFRSRD FHRLHHPPQL QPFQPQQQQP KMDEEQSSLR HGNKRDNDDS SSSNNNSNSA DGKQLAPLAT PGNGGAEGRE IIRKPRGRPP
101: GSKNKPKPPI IITRESANAL LSHVMEIADG YDICESVATF ACRRQRGVCV LSGSGTVTNV TLHQPASPGA VVTLHGRFEI LSLSGSFLPP PAPPAATGLA
201: IYLAGGQGQV VGGSVVGPLI ASGPVIIIAA SFGTAAYERL PLAAEEGLQM QGTLGSPDLI GQSPPPQLLP PDPNNLLFHS LPPNLLNNVQ VPADAHGWDG
301: SRDPPPY
101: GSKNKPKPPI IITRESANAL LSHVMEIADG YDICESVATF ACRRQRGVCV LSGSGTVTNV TLHQPASPGA VVTLHGRFEI LSLSGSFLPP PAPPAATGLA
201: IYLAGGQGQV VGGSVVGPLI ASGPVIIIAA SFGTAAYERL PLAAEEGLQM QGTLGSPDLI GQSPPPQLLP PDPNNLLFHS LPPNLLNNVQ VPADAHGWDG
301: SRDPPPY
001: MDPVQSHGSQ SSLPPPFHAR DFQLHLQQQQ QEFFLHHHQQ QRNQTDGDQQ GGSGGNRQIK MDREETSDNI DNIANNSGSE GKDIDIHGGS GEGGGGSGGD
101: HQMTRRPRGR PAGSKNKPKP PIIITRDSAN ALRTHVMEIG DGCDLVESVA TFARRRQRGV CVMSGTGNVT NVTIRQPGSH PSPGSVVSLH GRFEILSLSG
201: SFLPPPAPPT ATGLSVYLAG GQGQVVGGSV VGPLLCAGPV VVMAASFSNA AYERLPLEED EMQTPVHGGG GGGSLESPPM MGQQLQHQQQ AMSGHQGLPP
301: NLLGSVQLQQ QHDQSYWSTG RPPY
101: HQMTRRPRGR PAGSKNKPKP PIIITRDSAN ALRTHVMEIG DGCDLVESVA TFARRRQRGV CVMSGTGNVT NVTIRQPGSH PSPGSVVSLH GRFEILSLSG
201: SFLPPPAPPT ATGLSVYLAG GQGQVVGGSV VGPLLCAGPV VVMAASFSNA AYERLPLEED EMQTPVHGGG GGGSLESPPM MGQQLQHQQQ AMSGHQGLPP
301: NLLGSVQLQQ QHDQSYWSTG RPPY
Arabidopsis Description
AHL24AT-hook motif nuclear-localized protein [Source:UniProtKB/TrEMBL;Acc:A0A178V625]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.