Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- nucleus 2
- cytosol 1
- mitochondrion 1
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P27580_001 | Banana | cytosol, nucleus, plastid | 75.59 | 76.49 |
| GSMUA_Achr8P14790_001 | Banana | plastid | 68.5 | 62.37 |
| Zm00001d024537_P001 | Maize | cytosol, endoplasmic reticulum, nucleus | 69.69 | 60.82 |
| Os08t0159700-01 | Rice | cytosol | 66.93 | 58.82 |
| TraesCS7A01G299100.1 | Wheat | cytosol, nucleus, plastid | 65.75 | 58.8 |
| TraesCS7D01G294700.1 | Wheat | cytosol, nucleus, peroxisome | 65.75 | 58.8 |
| TraesCS7B01G187300.1 | Wheat | cytosol, nucleus, peroxisome | 65.35 | 58.45 |
| KXG24494 | Sorghum | nucleus | 68.11 | 58.05 |
| Zm00001d049521_P001 | Maize | cytosol, endoplasmic reticulum, peroxisome | 67.32 | 57.19 |
| HORVU7Hr1G070490.2 | Barley | cytosol, mitochondrion, peroxisome | 64.17 | 56.6 |
| GSMUA_Achr2P04780_001 | Banana | cytosol, nucleus, plastid | 56.69 | 56.47 |
| GSMUA_AchrUn_... | Banana | cytosol | 36.22 | 55.09 |
| GSMUA_Achr11P... | Banana | cytosol | 37.01 | 54.65 |
| GSMUA_Achr5P03390_001 | Banana | nucleus | 54.72 | 53.67 |
| GSMUA_Achr2P04080_001 | Banana | cytosol | 48.43 | 52.34 |
| GSMUA_Achr5P13920_001 | Banana | nucleus | 43.7 | 48.9 |
| GSMUA_Achr5P19550_001 | Banana | cytosol | 51.18 | 48.15 |
| GSMUA_Achr5P28720_001 | Banana | mitochondrion, peroxisome, plastid | 48.43 | 46.95 |
| GSMUA_Achr2P03140_001 | Banana | cytosol, nucleus, vacuole | 56.69 | 46.6 |
| GSMUA_Achr1P19850_001 | Banana | nucleus | 56.3 | 46.58 |
| GSMUA_Achr10P... | Banana | cytosol, nucleus, vacuole | 55.51 | 46.23 |
| GSMUA_Achr9P12320_001 | Banana | plastid | 49.61 | 44.84 |
| GSMUA_Achr1P08290_001 | Banana | nucleus | 52.76 | 43.65 |
| GSMUA_Achr7P15000_001 | Banana | nucleus | 46.46 | 42.29 |
| GSMUA_Achr11P... | Banana | nucleus | 48.82 | 42.18 |
| GSMUA_Achr6P01060_001 | Banana | nucleus | 46.46 | 42.14 |
| GSMUA_Achr7P10630_001 | Banana | plastid | 47.64 | 41.58 |
| GSMUA_Achr6P04980_001 | Banana | cytosol, nucleus, plastid | 45.28 | 40.07 |
| GSMUA_Achr9P28280_001 | Banana | plastid | 46.46 | 39.33 |
| GSMUA_Achr7P19000_001 | Banana | cytosol, plasma membrane, plastid | 28.74 | 39.25 |
| GSMUA_Achr8P23410_001 | Banana | cytosol | 27.95 | 34.63 |
| GSMUA_Achr3P11300_001 | Banana | nucleus | 31.1 | 34.5 |
| GSMUA_Achr10P... | Banana | nucleus | 37.8 | 34.41 |
| GSMUA_AchrUn_... | Banana | nucleus | 38.58 | 29.25 |
| GSMUA_Achr3P06770_001 | Banana | cytosol | 25.98 | 29.07 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr9P23390_001 | EnsemblPlants:GSMUA_Achr9T23390_001 | EnsemblPlantsGene:GSMUA_Achr9G23390_001 | Gene3D:3.30.1330.80 | InterPro:IPR005175 | InterPro:PPC_dom |
| PANTHER:PTHR31100 | PANTHER:PTHR31100:SF21 | PFAM:PF03479 | PFscan:PS51742 | SEG:seg | SUPFAM:SSF117856 |
| TMHMM:TMhelix | UniParc:UPI000295596C | UniProt:M0U2U8 | MapMan:35.1 | : | : |
Description
DNA binding protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr9G23390_001]
Coordinates
chr9:+:28251792..28252664
Molecular Weight (calculated)
25699.8 Da
IEP (calculated)
8.899
GRAVY (calculated)
0.037
Length
254 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGLDLGTAS RFLHPLHLHL PHTRPDSEES PAAGGDGASG EVQASHGLEL SAPAGPGDVV GRRPRGRPPG SKNKPKPPVI ITRESANALR AHMLEVAGGC
101: DVFECLSTYA RRRQRGVCVL SGSGTVANVS LRQPAGAPVA TLQGRFEILS LSGSFLPPPA PPGATSLAVF LAGGPGQVVG GSVVGALIAA GPVIVIAASF
201: TNVAYERLPG GVGTSFTDPS SGLPFFSLPL NMPQLPMDGH SGWAGSASAA RPPY
101: DVFECLSTYA RRRQRGVCVL SGSGTVANVS LRQPAGAPVA TLQGRFEILS LSGSFLPPPA PPGATSLAVF LAGGPGQVVG GSVVGALIAA GPVIVIAASF
201: TNVAYERLPG GVGTSFTDPS SGLPFFSLPL NMPQLPMDGH SGWAGSASAA RPPY
001: MAGLDLGTTS RYVHNVDGGG GGQFTTDNHH EDDGGAGGNH HHHHHNHNHH QGLDLIASND NSGLGGGGGG GSGDLVMRRP RGRPAGSKNK PKPPVIVTRE
101: SANTLRAHIL EVGSGCDVFE CISTYARRRQ RGICVLSGTG TVTNVSIRQP TAAGAVVTLR GTFEILSLSG SFLPPPAPPG ATSLTIFLAG AQGQVVGGNV
201: VGELMAAGPV MVMAASFTNV AYERLPLDEH EEHLQSGGGG GGGNMYSEAT GGGGGLPFFN LPMSMPQIGV ESWQGNHAGA GRAPF
101: SANTLRAHIL EVGSGCDVFE CISTYARRRQ RGICVLSGTG TVTNVSIRQP TAAGAVVTLR GTFEILSLSG SFLPPPAPPG ATSLTIFLAG AQGQVVGGNV
201: VGELMAAGPV MVMAASFTNV AYERLPLDEH EEHLQSGGGG GGGNMYSEAT GGGGGLPFFN LPMSMPQIGV ESWQGNHAGA GRAPF
Arabidopsis Description
AHL21AT-hook motif nuclear-localized protein 21 [Source:UniProtKB/Swiss-Prot;Acc:O82166]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.