Factsheet for Zm00001d046696_P001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, nucleus, cytosol

Predictor Summary:

mitochondrion 2
cytosol 1
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, peroxisome
Any Predictor:	cytosol, mitochondrion, peroxisome
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER88668	Sorghum	cytosol	86.72	87.04
TraesCS7A01G395400.1	Wheat	cytosol	71.59	67.13
TraesCS7B01G297300.1	Wheat	cytosol	72.32	67.12
HORVU7Hr1G093230.2	Barley	cytosol	64.58	57.76
Zm00001d018508_P001	Maize	cytosol	41.33	45.71
KRH51551	Soybean	plastid	34.32	45.59
Zm00001d049906_P001	Maize	nucleus	42.8	43.77
Zm00001d031887_P001	Maize	nucleus	43.17	43.49
GSMUA_Achr9P12320_001	Banana	plastid	45.02	43.42
Solyc04g082810.2.1	Tomato	cytosol, nucleus, peroxisome	39.11	43.27
Zm00001d051620_P001	Maize	plastid	49.08	41.96
Zm00001d017825_P001	Maize	plastid	49.45	41.36
PGSC0003DMT400025705	Potato	plastid	39.11	40.77
Zm00001d045928_P001	Maize	nucleus	44.65	39.54
Zm00001d039249_P001	Maize	cytosol	22.51	39.35
CDY20404	Canola	nucleus	38.75	38.75
CDX87591	Canola	nucleus	39.48	38.21
Zm00001d024537_P001	Maize	cytosol, endoplasmic reticulum, nucleus	40.59	37.8
CDX88286	Canola	cytosol, endoplasmic reticulum, nucleus	38.38	37.68
CDY45983	Canola	nucleus	39.85	37.5
Bra015738.1-P	Field mustard	nucleus	39.85	37.5
Zm00001d049521_P001	Maize	cytosol, endoplasmic reticulum, peroxisome	41.33	37.46
Zm00001d026035_P001	Maize	cytosol, nucleus, peroxisome	42.8	37.42
CDX68095	Canola	cytosol	37.27	37.41
Zm00001d002495_P001	Maize	cytosol, nucleus, peroxisome	42.44	37.22
Zm00001d009031_P001	Maize	mitochondrion, plastid	27.68	36.95
Bra008262.1-P	Field mustard	nucleus	39.11	36.93
Bra003717.1-P	Field mustard	nucleus	38.75	36.59
CDX96613	Canola	nucleus	40.59	36.54
VIT_18s0122g00590.t01	Wine grape	endoplasmic reticulum, plasma membrane	42.44	36.39
Zm00001d028577_P001	Maize	nucleus	36.53	36.26
Zm00001d016132_P001	Maize	nucleus	40.96	35.92
CDX85952	Canola	cytosol	35.79	35.66
AT1G76500.1	Thale cress	nucleus	39.48	35.43
CDY31511	Canola	nucleus	35.06	35.32
Bra012256.1-P	Field mustard	nucleus	40.22	35.28
Bra016444.1-P	Field mustard	nucleus	40.96	35.24
AT1G20900.1	Thale cress	nucleus	40.22	35.05
Zm00001d036088_P001	Maize	extracellular	35.79	34.64
Zm00001d053429_P001	Maize	nucleus	40.59	34.38
CDY29494	Canola	nucleus	34.69	34.31
CDY01347	Canola	nucleus	34.32	34.19
Zm00001d045427_P001	Maize	cytosol, nucleus, plasma membrane	42.8	34.02
CDY33658	Canola	nucleus	36.53	33.9
CDY31858	Canola	nucleus	33.95	33.7
Bra025854.1-P	Field mustard	nucleus	35.06	33.22
Zm00001d042060_P001	Maize	plastid	28.41	31.43
Zm00001d031826_P001	Maize	cytosol, endoplasmic reticulum, nucleus	30.26	27.89
Zm00001d020768_P001	Maize	cytosol	32.47	26.43
Zm00001d005923_P001	Maize	nucleus	32.47	25.58

Protein Annotations

EntrezGene:103638777	Gene3D:3.30.1330.80	MapMan:35.1	ProteinID:AQL04871.1	InterPro:AT-hook_nuclear	GO:GO:0003674
GO:GO:0003676	GO:GO:0003677	GO:GO:0003680	GO:GO:0003700	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	InterPro:IPR005175	UniProt:K7VWK6
PFAM:PF03479	PIRSF:PIRSF016021	InterPro:PPC_dom	PFscan:PS51742	PANTHER:PTHR31100	PANTHER:PTHR31100:SF20
SUPFAM:SSF117856	UniParc:UPI0002220012	EnsemblPlantsGene:Zm00001d046696	EnsemblPlants:Zm00001d046696_P001	EnsemblPlants:Zm00001d046696_T001	SEG:seg

Description

AT-hook motif nuclear-localized protein 29

Coordinates

chr9:-:102808063..102808878

Molecular Weight (calculated)

27807.1 Da

IEP (calculated)

8.121

GRAVY (calculated)

-0.222

Length

271 amino acids

Sequence
(BLAST)

001: MASSKWWEQA ALDFPPPQQH HHQQPQPQQQ PHQAVPMPPA LATAPAGAVG ASPEGKQQGQ QQAGAIVPLR RPRGRPLGSK NKPKPPVIIT RDSPDALHSH
101: VLEVSPGADV CACVAEYARR RGRGVCVLGA SGAVGDVAVR GAAAPLRGRF ELLSVTGTVL PPPAPPEASG LAVLVSAGQG QVLGGSVVGP LVAAGPVTIF
201: AATFANAVYE RLPLADAPEL EVKPDLSTAT SAGGQDVQPQ LPMAPSHQQP PDMGAGYAGH RSPPYPWGGD V

Best Arabidopsis Sequence Match ( AT1G76500.1 )
(BLAST)

001: MDGGYDQSGG ASRYFHNLFR PELHHQLQPQ PQLHPLPQPQ PQPQPQQQNS DDESDSNKDP GSDPVTSGST GKRPRGRPPG SKNKPKPPVI VTRDSPNVLR
101: SHVLEVSSGA DIVESVTTYA RRRGRGVSIL SGNGTVANVS LRQPATTAAH GANGGTGGVV ALHGRFEILS LTGTVLPPPA PPGSGGLSIF LSGVQGQVIG
201: GNVVAPLVAS GPVILMAASF SNATFERLPL EDEGGEGGEG GEVGEGGGGE GGPPPATSSS PPSGAGQGQL RGNMSGYDQF AGDPHLLGWG AAAAAAPPRP
301: AF

Arabidopsis Description

AHL29AT-hook motif nuclear-localized protein 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.