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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • cytosol 1
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus, plastid
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY45983 Canola nucleus 99.3 98.96
CDY20404 Canola nucleus 92.33 97.79
Bra015738.1-P Field mustard nucleus 82.23 81.94
Bra003717.1-P Field mustard nucleus 78.05 78.05
AT1G76500.1 Thale cress nucleus 81.88 77.81
Bra016444.1-P Field mustard nucleus 76.66 69.84
Bra012256.1-P Field mustard nucleus 72.13 66.99
Bra025854.1-P Field mustard nucleus 65.85 66.08
KRH51551 Soybean plastid 42.86 60.29
Solyc04g082810.2.1 Tomato cytosol, nucleus, peroxisome 50.17 58.78
PGSC0003DMT400025705 Potato plastid 51.57 56.92
Zm00001d051620_P001 Maize plastid 53.31 48.27
Zm00001d017825_P001 Maize plastid 53.66 47.53
GSMUA_Achr9P12320_001 Banana plastid 46.34 47.33
EES05630 Sorghum cytosol, mitochondrion, nucleus, plastid 54.01 47.26
TraesCS6B01G306100.1 Wheat plastid 54.01 47.11
TraesCS6D01G258400.1 Wheat plastid 54.01 47.11
TraesCS6A01G277700.1 Wheat plastid 53.66 47.09
HORVU6Hr1G070090.1 Barley plastid 54.01 46.83
Os02t0713700-01 Rice cytosol, mitochondrion, nucleus, plastid 54.36 46.43
VIT_18s0122g00590.t01 Wine grape endoplasmic reticulum, plasma membrane 49.13 44.62
Bra011612.1-P Field mustard cytosol, nucleus, peroxisome 46.69 44.37
KXG19929 Sorghum nucleus 48.08 43.4
Zm00001d045928_P001 Maize nucleus 45.99 43.14
Bra004732.1-P Field mustard plastid 39.02 42.91
Os06t0326900-01 Rice nucleus 47.39 42.24
TraesCS7B01G193900.1 Wheat cytosol, nucleus, peroxisome 47.04 41.93
Bra012639.1-P Field mustard cytosol 42.51 41.92
HORVU7Hr1G046930.1 Barley cytosol, nucleus, peroxisome 45.99 41.77
Bra040183.1-P Field mustard cytosol 42.51 41.64
TraesCS7A01G225700.1 Wheat nucleus 46.69 41.49
Bra000281.1-P Field mustard plastid 37.63 41.38
Bra017324.1-P Field mustard cytosol, nucleus, peroxisome 41.12 41.26
TraesCS7D01G228800.1 Wheat nucleus 44.95 40.57
Bra005355.1-P Field mustard cytosol 40.07 40.49
Bra040184.1-P Field mustard cytosol, nucleus, peroxisome 44.25 40.45
Bra004911.1-P Field mustard nucleus 43.21 40.26
Bra016853.1-P Field mustard plastid 36.59 40.23
Bra003217.1-P Field mustard nucleus 40.77 39.26
Zm00001d046696_P001 Maize cytosol, nucleus, peroxisome 36.93 39.11
Bra026211.1-P Field mustard plastid 27.87 39.02
Bra007176.1-P Field mustard plastid 40.07 38.72
Bra039338.1-P Field mustard nucleus 41.46 38.64
EER88668 Sorghum cytosol 35.54 37.78
Bra040135.1-P Field mustard cytosol, nucleus, peroxisome 37.98 36.95
TraesCS7B01G297300.1 Wheat cytosol 36.59 35.96
TraesCS7A01G395400.1 Wheat cytosol 35.89 35.64
Bra014735.1-P Field mustard plastid 37.98 35.5
Bra019355.1-P Field mustard nucleus 40.42 35.47
Bra000593.1-P Field mustard cytosol 32.06 34.98
Bra013649.1-P Field mustard nucleus 39.37 34.66
Bra023007.1-P Field mustard cytosol, nucleus, peroxisome 40.42 34.22
HORVU7Hr1G093230.2 Barley cytosol 34.84 33.0
Protein Annotations
EnsemblPlants:Bra008262.1EnsemblPlants:Bra008262.1-PEnsemblPlantsGene:Bra008262Gene3D:3.30.1330.80InterPro:IPR005175InterPro:PPC_dom
PANTHER:PTHR31100PANTHER:PTHR31100:SF43PFAM:PF03479PFscan:PS51742SEG:segSUPFAM:SSF117856
UniParc:UPI0002545F24UniProt:M4CVL5MapMan:35.1:::
Description
AT1G76500 (E=1e-055) SOB3, AHL29 | SOB3 (SUPPRESSOR OF PHYB-4#3); DNA binding
Coordinates
chrA02:+:14186272..14187135
Molecular Weight (calculated)
29240.1 Da
IEP (calculated)
6.900
GRAVY (calculated)
-0.416
Length
287 amino acids
Sequence
(BLAST)
001: MDGGYDQSGG ASRYFHGLFR SELHNQLQQQ AQAQPQPHLQ LQPDDESDSN KDSGRLDSDP VTSGSTPGKR PRGRPPGSKN KLKPPVIVTG DSPNVLRSHV
101: LEVSSGADIV ESVNTYARRR GRGVSVLSGN GTVANVVLRQ PVTIHGNNGG TGAGVGGVVT LHGKFDILSI TGTVLPPPAP PGSGGLSIFL SGGQGQVIGG
201: SVVAPLVASG PVILMAASFS NATFERLPLK DEEEEGGGGG PPPAPTASPP SGPGQGEIRG NPSGYDQFTG DPHSLGWVAG AASRPSF
Best Arabidopsis Sequence Match ( AT1G76500.1 )
(BLAST)
001: MDGGYDQSGG ASRYFHNLFR PELHHQLQPQ PQLHPLPQPQ PQPQPQQQNS DDESDSNKDP GSDPVTSGST GKRPRGRPPG SKNKPKPPVI VTRDSPNVLR
101: SHVLEVSSGA DIVESVTTYA RRRGRGVSIL SGNGTVANVS LRQPATTAAH GANGGTGGVV ALHGRFEILS LTGTVLPPPA PPGSGGLSIF LSGVQGQVIG
201: GNVVAPLVAS GPVILMAASF SNATFERLPL EDEGGEGGEG GEVGEGGGGE GGPPPATSSS PPSGAGQGQL RGNMSGYDQF AGDPHLLGWG AAAAAAPPRP
301: AF
Arabidopsis Description
AHL29AT-hook motif nuclear-localized protein 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K7]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.