Factsheet for TraesCS1D01G043600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 3
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus, peroxisome
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G056000.1	Wheat	mitochondrion	99.07	98.77
TraesCS1A01G043100.1	Wheat	mitochondrion, nucleus	98.77	98.77
HORVU1Hr1G008650.1	Barley	mitochondrion, nucleus, peroxisome	96.6	97.2
HORVU7Hr1G020390.1	Barley	mitochondrion	52.16	89.42
HORVU4Hr1G015750.1	Barley	mitochondrion	71.6	83.45
TraesCS4D01G210500.1	Wheat	cytosol, nucleus, plastid	47.84	60.55
TraesCS6D01G055500.1	Wheat	cytosol	46.3	53.19
TraesCS4D01G001800.1	Wheat	nucleus	44.75	50.88
TraesCS6D01G383400.1	Wheat	cytosol, extracellular, peroxisome	44.14	49.31
TraesCS7D01G294700.1	Wheat	cytosol, nucleus, peroxisome	40.74	46.48
TraesCS2D01G448700.1	Wheat	cytosol, nucleus, peroxisome	41.98	43.45
TraesCS6D01G167600.1	Wheat	nucleus	41.36	43.37
TraesCS6D01G258400.1	Wheat	plastid	43.83	43.16
TraesCS7D01G228800.1	Wheat	nucleus	38.58	39.31
TraesCS7D01G072200.1	Wheat	cytosol, endoplasmic reticulum, nucleus	39.51	36.89
TraesCS3D01G173400.1	Wheat	plastid	24.07	36.62
TraesCS5D01G252500.1	Wheat	cytosol	32.1	31.04
TraesCS3D01G496700.1	Wheat	cytosol	26.54	28.67
TraesCS5D01G199600.1	Wheat	plastid	40.12	24.95

Protein Annotations

EnsemblPlants:TraesCS1D01G043600.1	EnsemblPlantsGene:TraesCS1D01G043600	Gene3D:3.30.1330.80	InterPro:IPR005175	InterPro:PPC_dom	PANTHER:PTHR31100
PANTHER:PTHR31100:SF13	PFAM:PF03479	PFscan:PS51742	SEG:seg	SUPFAM:SSF117856	TIGR:cd11378
MapMan:35.1	:	:	:	:	:

Description

No Description!

Coordinates

chr1D:+:22863354..22864328

Molecular Weight (calculated)

31781.2 Da

IEP (calculated)

6.354

GRAVY (calculated)

-0.197

Length

324 amino acids

Sequence
(BLAST)

001: MAWWAGSMGG LDLRNHLAQF GGPAAGGAAM GGAEQAPTTP NSSGSNNHDD SSGAAQDSPT AGAGDNSPNP NAAISGSGPS GGGSGGGGSS SGRRPRGRPA
101: GSKNKPKPPI IITRESPNTL RSHVLEIASG ADIMEAVATF ARRRQRGVSV LSGSGVVGNV TLRQPAAPPG SVVTLHGRFE ILSLSGAFLP SPCPPGATGL
201: AVYLAGGQGQ VVGGTVIGEL VASGPVMVVA ATFSNATYER LPLADEEPGE AAAAATGSDG MQLPDGPAPG GNNGGMGAAV GVPGLPDPSS MPFYNLPPNL
301: QMPNGGGQMA HDVFGSFRPP PPAF

Best Arabidopsis Sequence Match ( AT1G76500.1 )
(BLAST)

001: MDGGYDQSGG ASRYFHNLFR PELHHQLQPQ PQLHPLPQPQ PQPQPQQQNS DDESDSNKDP GSDPVTSGST GKRPRGRPPG SKNKPKPPVI VTRDSPNVLR
101: SHVLEVSSGA DIVESVTTYA RRRGRGVSIL SGNGTVANVS LRQPATTAAH GANGGTGGVV ALHGRFEILS LTGTVLPPPA PPGSGGLSIF LSGVQGQVIG
201: GNVVAPLVAS GPVILMAASF SNATFERLPL EDEGGEGGEG GEVGEGGGGE GGPPPATSSS PPSGAGQGQL RGNMSGYDQF AGDPHLLGWG AAAAAAPPRP
301: AF

Arabidopsis Description

AHL29AT-hook motif nuclear-localized protein 29 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9K7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.