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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 10
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, plastid
BaCelLo:plastid
ChloroP:plastid
EpiLoc:plastid
iPSORT:plastid
MultiLoc:plastid
Plant-mPloc:plastid
Predotar:plastid
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG92072
KRH29099

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G03940.1 KRG92072 AT2G47450.1 11306572
AT5G03940.1 KRH29099 AT2G47450.1 11306572
AT5G03940.1 KRG92072 AT2G47450.1 14517205
AT5G03940.1 KRH29099 AT2G47450.1 14517205
AT5G03940.1 KRG92072 AT2G47450.1 15292240
AT5G03940.1 KRH29099 AT2G47450.1 15292240
AT5G03940.1 KRG92072 AT2G47450.1 15632183
AT5G03940.1 KRH29099 AT2G47450.1 15632183
AT5G03940.1 KRG92072 AT2G47450.1 16678173
AT5G03940.1 KRH29099 AT2G47450.1 16678173
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_08s0007g03160.t01 Wine grape plastid 84.07 83.77
PGSC0003DMT400022884 Potato plastid 81.42 82.29
Solyc09g009940.2.1 Tomato plastid 81.24 80.95
AT5G03940.1 Thale cress plastid 79.47 79.61
GSMUA_Achr10P... Banana plastid 80.71 79.3
Bra009499.1-P Field mustard plastid 78.23 78.09
CDX70273 Canola plastid 78.23 78.09
CDY41424 Canola plastid 77.88 77.88
CDY14166 Canola plastid 75.22 75.35
Bra028809.1-P Field mustard plastid 75.04 75.18
CDY04905 Canola plastid 74.87 75.0
Os11t0153600-01 Rice cytosol 28.14 72.6
Zm00001d052556_P001 Maize plastid 68.67 71.19
KXG27759 Sorghum plastid 69.2 70.96
TraesCS4D01G115500.1 Wheat plastid 69.03 70.4
EES16662 Sorghum plastid 69.56 70.3
TraesCS4A01G197700.1 Wheat plastid 68.5 69.86
TraesCS4B01G117800.1 Wheat plastid 68.32 69.68
Zm00001d023431_P002 Maize plastid 69.38 69.5
HORVU4Hr1G021950.4 Barley plastid 67.43 68.65
TraesCS4D01G115600.1 Wheat plastid 67.26 68.59
TraesCS4A01G197600.1 Wheat plastid 67.08 68.54
Os11t0153700-01 Rice plastid 66.9 67.86
HORVU4Hr1G021960.1 Barley plastid 66.9 67.38
CDY14165 Canola plastid 25.49 64.0
TraesCS4B01G117900.1 Wheat plastid 66.02 62.69
KRH44479 Soybean cytosol 23.54 26.87
KRH47429 Soybean cytosol, endoplasmic reticulum, nucleus 23.36 26.67
KRH23593 Soybean cytosol 23.36 26.4
KRH09713 Soybean cytosol 23.19 26.25
KRH48224 Soybean plastid 16.28 24.73
KRH65131 Soybean plastid 16.11 24.46
KRH72313 Soybean cytosol 11.33 20.78
KRH03040 Soybean endoplasmic reticulum 17.7 15.97
KRH54944 Soybean endoplasmic reticulum 16.99 15.41
Os11t0153800-01 Rice nucleus 0.53 2.78
Protein Annotations
Gene3D:1.10.260.30Gene3D:1.20.120.140EntrezGene:100782581MapMan:23.1.7.3.2Gene3D:3.40.50.300InterPro:AAA+_ATPase
EMBL:ACUP02002091EnsemblPlantsGene:GLYMA_03G196900GO:GO:0000166GO:GO:0003674GO:GO:0003676GO:GO:0003723
GO:GO:0003824GO:GO:0003924GO:GO:0005488GO:GO:0005515GO:GO:0005525GO:GO:0005575
GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0006614GO:GO:0006810GO:GO:0008150
GO:GO:0008312GO:GO:0009507GO:GO:0009536GO:GO:0009570GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0016043GO:GO:0016787GO:GO:0019904GO:GO:0032991GO:GO:0048500
GO:GO:0070208UniProt:I1JQ35InterPro:IPR036891EnsemblPlants:KRH67940ProteinID:KRH67940ProteinID:KRH67940.1
HAMAP:MF_00306InterPro:P-loop_NTPasePFAM:PF00448PFAM:PF02881PFAM:PF02978ScanProsite:PS00300
PANTHER:PTHR11564PANTHER:PTHR11564:SF24SMART:SM00382SMART:SM00962SMART:SM00963InterPro:SRP54
InterPro:SRP54_GTPase_domInterPro:SRP_FfhSUPFAM:SSF47446SUPFAM:SSF52540InterPro:Signal_recog_part_SRP54_M_sfInterPro:Signal_recog_particl_SRP54_hlx
InterPro:Signal_recog_particle_SRP54_MTIGRFAMs:TIGR00959UniParc:UPI0002339616SEG:seg::
Description
hypothetical protein
Coordinates
chr3:-:40641612..40648426
Molecular Weight (calculated)
61752.2 Da
IEP (calculated)
10.203
GRAVY (calculated)
-0.258
Length
565 amino acids
Sequence
(BLAST)
001: MEAVTGSHHF STLSLSFSHN KTLRSSSAKS IRLSSPSTNA SLSSRNWFAK EVWGWVNSNS KGVAVRRYTR GVVVRAEMFG QLTSGLETAW NKLKGEEVLS
101: KENIVEPMRD IRRALLEADV SLPVVRRFVQ SVSDQAVGVG VIRGVRPDQQ LVKIVHEELV QLMGGEVSEL VFAKSGPTVI LLAGLQGVGK TTVCAKLANY
201: LKKQGKSCML VAGDVYRPAA IDQLAILGKQ VDVPVYTAGT DVKPSEIAKQ GLEEAKKKKI DVVIVDTAGR LQIDKTMMDE LKEVKKALNP TEVLLVVDAM
301: TGQEAAALVT TFNLEIGITG AILTKLDGDS RGGAALSVKE VSGKPIKLVG RGERMEDLEP FYPDRMAGRI LGMGDVLSFV EKAQQVMRQE DAEELQKKIM
401: SAKFDFNDFL KQTRTVAKMG SVSRVIGMIP GMGKVTPAQI RDAEKNLLNM EAMIEAMTPE EREKPELLAE SPVRRKRVAQ DSGKTEQQVS QLVAQLFQMR
501: VRMKNLMGVM ESGSLPTLSN LEEALKAEEK APPGTARRRK RSESRSVFGD STPARPSPRG FGSKN
Best Arabidopsis Sequence Match ( AT5G03940.1 )
(BLAST)
001: MEALQFSSVN RVPCTLSCTG NRRIKAAFSS AFTGGTINSA SLSSSRNLST REIWSWVKSK TVVGHGRYRR SQVRAEMFGQ LTGGLEAAWS KLKGEEVLTK
101: DNIAEPMRDI RRALLEADVS LPVVRRFVQS VSDQAVGMGV IRGVKPDQQL VKIVHDELVK LMGGEVSELQ FAKSGPTVIL LAGLQGVGKT TVCAKLACYL
201: KKQGKSCMLI AGDVYRPAAI DQLVILGEQV GVPVYTAGTD VKPADIAKQG LKEAKKNNVD VVIMDTAGRL QIDKGMMDEL KDVKKFLNPT EVLLVVDAMT
301: GQEAAALVTT FNVEIGITGA ILTKLDGDSR GGAALSVKEV SGKPIKLVGR GERMEDLEPF YPDRMAGRIL GMGDVLSFVE KATEVMRQED AEDLQKKIMS
401: AKFDFNDFLK QTRAVAKMGS MTRVLGMIPG MGKVSPAQIR EAEKNLLVME AMIEVMTPEE RERPELLAES PERRKRIAKD SGKTEQQVSA LVAQIFQMRV
501: KMKNLMGVME GGSIPALSGL EDALKAEQKA PPGTARRKRK ADSRKKFVES ASSKPGPRGF GSGN
Arabidopsis Description
FFCSRP54CP [Source:UniProtKB/TrEMBL;Acc:A0A178UD49]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.