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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: endoplasmic reticulum

Predictor Summary:
  • nucleus 1
  • mitochondrion 4
  • endoplasmic reticulum 2
  • cytosol 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:endoplasmic reticulum
Plant-mPloc:cytosol, mitochondrion
Predotar:secretory
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
 endoplasmic reticulum: 27224218
msms PMID: 27224218 doi
X Wang, S Komatsu
Graduate School of Life and Environmental Sciences, University of Tsukuba , Tsukuba 305-8572, Japan., National Institute of Crop Science, National Agriculture and Food Research Organization , Tsukuba 305-8518, Japan.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr5P20650_001 Banana cytosol 47.44 88.13
KRH54944 Soybean endoplasmic reticulum 78.43 78.81
VIT_11s0037g00300.t01 Wine grape endoplasmic reticulum 77.16 78.41
KRH72313 Soybean cytosol 38.5 78.25
GSMUA_Achr11P... Banana endoplasmic reticulum 69.17 76.91
Solyc12g009990.1.1 Tomato endoplasmic reticulum, extracellular 74.92 75.77
PGSC0003DMT400020462 Potato endoplasmic reticulum, extracellular 74.76 75.61
AT4G30600.1 Thale cress endoplasmic reticulum 74.44 73.5
Bra024060.1-P Field mustard cytosol, endoplasmic reticulum 71.25 72.64
CDX72255 Canola cytosol, endoplasmic reticulum 71.09 72.24
CDY39221 Canola cytosol, endoplasmic reticulum 70.93 72.2
CDY28196 Canola endoplasmic reticulum 71.25 71.7
Bra011203.1-P Field mustard endoplasmic reticulum 71.25 71.7
GSMUA_Achr11P... Banana cytosol, mitochondrion 54.31 71.43
CDX68673 Canola extracellular 71.25 71.02
EER93028 Sorghum cytosol, endoplasmic reticulum, mitochondrion, plastid 69.65 69.87
TraesCS5A01G534900.1 Wheat golgi 71.09 69.31
Zm00001d027293_P004 Maize cytosol, endoplasmic reticulum, mitochondrion, plastid 69.81 69.26
Bra014811.1-P Field mustard cytosol, endoplasmic reticulum 58.15 69.07
TraesCS4D01G360300.1 Wheat cytosol, golgi, mitochondrion, plastid 71.25 69.04
TraesCS4B01G367200.1 Wheat cytosol, endoplasmic reticulum, mitochondrion, plastid 71.09 68.99
TraesCS6D01G089600.1 Wheat endoplasmic reticulum 61.5 63.53
TraesCS6A01G101200.1 Wheat endoplasmic reticulum 61.66 63.07
TraesCS6B01G129300.1 Wheat endoplasmic reticulum 61.02 62.83
EES17686 Sorghum endoplasmic reticulum, extracellular 57.83 61.56
HORVU6Hr1G018280.1 Barley cytosol, endoplasmic reticulum 62.14 61.45
KRH48224 Soybean plastid 15.97 26.88
KRH65131 Soybean plastid 15.81 26.61
KRH67940 Soybean plastid 15.97 17.7
KRH09713 Soybean cytosol 13.58 17.03
KRH44479 Soybean cytosol 13.42 16.97
KRH23593 Soybean cytosol 13.42 16.8
KRH47429 Soybean cytosol, endoplasmic reticulum, nucleus 13.26 16.77
Protein Annotations
Gene3D:1.20.120.140EntrezGene:100783780MapMan:23.3.1.2.1Gene3D:3.30.450.60Gene3D:3.40.50.300InterPro:AAA+_ATPase
EMBL:ACUP02010334EnsemblPlantsGene:GLYMA_17G073300GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0003924
GO:GO:0005047GO:GO:0005488GO:GO:0005525GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005783GO:GO:0005785GO:GO:0006614GO:GO:0006810GO:GO:0006886
GO:GO:0008150GO:GO:0016020GO:GO:0016192GO:GO:0016787UniProt:K7MKC7EnsemblPlants:KRH03040
ProteinID:KRH03040ProteinID:KRH03040.1InterPro:Longin-like_dom_sfInterPro:P-loop_NTPasePFAM:PF00448PFAM:PF02881
PFAM:PF04086ScanProsite:PS00300PANTHER:PTHR43134PANTHER:PTHR43134:SF4SMART:SM00382SMART:SM00962
SMART:SM00963InterPro:SRP/SRP_NInterPro:SRP54_GTPase_domSUPFAM:SSF47364SUPFAM:SSF52540SUPFAM:SSF64356
InterPro:Sig_recog_particle_rcpt_asu_NInterPro:Signal_recog_particl_SRP54_hlxUniParc:UPI000233EF0DSEG:seg::
Description
hypothetical protein
Coordinates
chr17:+:5732632..5736607
Molecular Weight (calculated)
68793.0 Da
IEP (calculated)
8.414
GRAVY (calculated)
-0.417
Length
626 amino acids
Sequence
(BLAST)
001: MLEQLLIFTR GGLILWTCNH LSNALRGSPI DTLIRSCLLE ERSGAASFNY DAPGAAYSLK WTFHNDLGLV FVAVYQRVLH LLYVDDLLAA VKREFSRLYH
101: PQKTAYRDFD EIFQQLQIEA ESRSENFKKP NPVPALAPNR KQNGTWQGQG LGQNAGSEKK SDGDGKKGRK LENDNFSVAN SNSNANVNHS GGKSSVNNNI
201: GKENESSNVG AFDVNRLQKL KGKKGNGNGK KKDALVVAAA KGEPKKVDKP NRVWDQPAPQ TKLDFTDHVD GDGDRSADFL AKEQGESMMD KEEILSSDSE
301: VEDDDDDTGK DNMPVAKKKG WFSSMFQSIA GKANLEKSDL EPALKALKDR LMTKNVAEEI AEKLCESVAA SLEGKKLASF TRISSTVHTA MEEALVRILT
401: PRRSIDILRD VHAAKEQRKP YVVVFVGVNG VGKSTNLAKV AYWLLQHNVS VMMAACDTFR SGAVEQLRTH ARRLQIPIFE KGYEKDPAIV AKEAIQEAAR
501: NGSDVVLVDT AGRMQDNEPL MRALSKLVYL NNPDLILFVG EALVGNDAVD QLSKFNQKLA DLSTSPTPRL IDGILLTKFD TIDDKVGAAL SMVYVSGAPV
601: MFVGCGQSYT DLKKLNVKSI AKTLLK
Best Arabidopsis Sequence Match ( AT4G30600.2 )
(BLAST)
001: MLEQLLIFTR GGLILWTCKE IGNALKGSPI DTLIRSCLLE ERSGAVSFNY DAPGAAYTLK WTFHNDLGLV FVAVYQRILH LLYVDDLLSM VKQSFSEVYD
101: PKRMAYDDFD ETFRQLRIEA EARAEELRKT KQVGKPVTSV KKQGQVSKPG LEGGNKRVSS EGGSKKDDGD GGNKAKVSTL TNGHSNGNHQ MEDDSQETND
201: LANGKENTSS NVAVDLSKLQ KLRSKGVRGR GGVRKTDSIG NKSSKVAEPA KKATKKNRVW DDAAPKQSKL DFTDSIDENG NNDHVDIVAA DQGESMMDKE
301: EVFSSDSESE DDDEPGSDEK PAQAKKKGWF SSVFQSITGK ANLERTDLGP ALKALKERLM TKNVAEEIAE KLCESVEASL EGKKLSSFTR ISSTVQAAME
401: DALVRILTPR RSIDILRDVH AAKEQRKPYV VVFVGVNGVG KSTNLAKVAY WLQQHKVSVM MAACDTFRSG AVEQLRTHAR RLQIPIFEKG YEKDPAVVAK
501: EAIQEATRNG SDVVLVDTAG RMQDNEPLMR ALSKLINLNQ PDLVLFVGEA LVGNDAVDQL SKFNQKLSDL STSGNPRLID GILLTKFDTI DDKVGAALSM
601: VYISGSPVMF VGCGQSYTDL KKLNVKAIVK TLLK
Arabidopsis Description
AT4g30600/F17I23_60 [Source:UniProtKB/TrEMBL;Acc:Q9M0A0]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.