Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- nucleus 1
- endoplasmic reticulum 3
- mitochondrion 3
- cytosol 2
- extracellular 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011203.1-P | Field mustard | endoplasmic reticulum | 100.0 | 100.0 |
| CDX68673 | Canola | extracellular | 97.59 | 96.66 |
| AT4G30600.1 | Thale cress | endoplasmic reticulum | 89.39 | 87.7 |
| CDX72255 | Canola | cytosol, endoplasmic reticulum | 86.82 | 87.66 |
| CDY39221 | Canola | cytosol, endoplasmic reticulum | 86.5 | 87.48 |
| GSMUA_Achr5P20650_001 | Banana | cytosol | 46.14 | 85.16 |
| VIT_11s0037g00300.t01 | Wine grape | endoplasmic reticulum | 77.17 | 77.92 |
| PGSC0003DMT400020462 | Potato | endoplasmic reticulum, extracellular | 75.4 | 75.77 |
| Solyc12g009990.1.1 | Tomato | endoplasmic reticulum, extracellular | 75.24 | 75.61 |
| KRH54944 | Soybean | endoplasmic reticulum | 75.56 | 75.44 |
| GSMUA_Achr11P... | Banana | endoplasmic reticulum | 68.01 | 75.13 |
| KRH03040 | Soybean | endoplasmic reticulum | 71.7 | 71.25 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion | 54.34 | 71.01 |
| EER93028 | Sorghum | cytosol, endoplasmic reticulum, mitochondrion, plastid | 69.61 | 69.39 |
| Zm00001d027293_P004 | Maize | cytosol, endoplasmic reticulum, mitochondrion, plastid | 69.77 | 68.78 |
| TraesCS5A01G534900.1 | Wheat | golgi | 69.94 | 67.76 |
| TraesCS4B01G367200.1 | Wheat | cytosol, endoplasmic reticulum, mitochondrion, plastid | 70.1 | 67.6 |
| TraesCS4D01G360300.1 | Wheat | cytosol, golgi, mitochondrion, plastid | 69.94 | 67.34 |
| KRH72313 | Soybean | cytosol | 33.28 | 67.21 |
| TraesCS6D01G089600.1 | Wheat | endoplasmic reticulum | 60.61 | 62.21 |
| TraesCS6A01G101200.1 | Wheat | endoplasmic reticulum | 60.93 | 61.93 |
| TraesCS6B01G129300.1 | Wheat | endoplasmic reticulum | 60.13 | 61.51 |
| EES17686 | Sorghum | endoplasmic reticulum, extracellular | 57.88 | 61.22 |
| HORVU6Hr1G018280.1 | Barley | cytosol, endoplasmic reticulum | 60.45 | 59.4 |
| CDY18901 | Canola | plastid | 15.27 | 26.32 |
| CDX74765 | Canola | plastid | 15.43 | 26.09 |
| CDY27360 | Canola | plastid | 15.27 | 25.89 |
| CDY37064 | Canola | plastid | 15.27 | 25.82 |
| CDY10656 | Canola | cytosol | 5.95 | 18.88 |
| CDY36546 | Canola | cytosol | 13.5 | 17.54 |
| CDY39632 | Canola | cytosol | 13.5 | 17.5 |
| CDX93702 | Canola | cytosol | 13.83 | 17.37 |
| CDY40616 | Canola | cytosol | 13.83 | 17.37 |
| CDX77276 | Canola | cytosol | 13.83 | 17.34 |
| CDY16472 | Canola | cytosol | 10.77 | 17.09 |
| CDY46694 | Canola | cytosol | 8.36 | 16.77 |
| CDY04905 | Canola | plastid | 14.95 | 16.49 |
| CDX70273 | Canola | plastid | 14.95 | 16.43 |
| CDY17067 | Canola | cytosol, nucleus | 8.52 | 16.41 |
| CDY41424 | Canola | plastid | 14.79 | 16.28 |
| CDY14166 | Canola | plastid | 14.63 | 16.13 |
| CDY14165 | Canola | plastid | 5.63 | 15.56 |
Protein Annotations
| Gene3D:1.20.120.140 | MapMan:23.3.1.2.1 | Gene3D:3.30.450.60 | Gene3D:3.40.50.300 | GO:A0A078GRV3 | UniProt:A0A078GRV3 |
| InterPro:AAA+_ATPase | EnsemblPlants:CDY28196 | ProteinID:CDY28196 | ProteinID:CDY28196.1 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005047 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005785 | GO:GO:0006614 |
| GO:GO:0006810 | GO:GO:0006886 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016192 | GO:GO:0016787 |
| EnsemblPlantsGene:GSBRNA2T00039915001 | InterPro:Longin-like_dom_sf | InterPro:P-loop_NTPase | PFAM:PF00448 | PFAM:PF02881 | PFAM:PF04086 |
| ScanProsite:PS00300 | PANTHER:PTHR43134 | PANTHER:PTHR43134:SF4 | SMART:SM00382 | SMART:SM00962 | SMART:SM00963 |
| InterPro:SRP/SRP_N | InterPro:SRP54_GTPase_dom | SUPFAM:SSF47364 | SUPFAM:SSF52540 | SUPFAM:SSF64356 | InterPro:Sig_recog_particle_rcpt_asu_N |
| InterPro:Signal_recog_particl_SRP54_hlx | UniParc:UPI0002546D95 | SEG:seg | : | : | : |
Description
BnaA01g06530DBnaA01g06530D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GRV3]
Coordinates
chrLK032216:-:217083..220084
Molecular Weight (calculated)
68605.9 Da
IEP (calculated)
6.957
GRAVY (calculated)
-0.455
Length
622 amino acids
Sequence
(BLAST)
(BLAST)
001: MLEQLLIFTR GGLILWTCKE LGKALKSSPI DTLIRSCLLE ERSGEVSFNY EAYTLKWTFH NDLGLVFVAV YQRILHLLYV DDLLSMVKES FSEIYDPKRM
101: SYGDFDETFR QLRMEAEARG EELRKVKVVS SVKKQGQVSK SGLDGGIKSG GGGSKKDDGD GDKDKVGSLM TNGNHKDDDK TDLANGKENT ADNVVLDPSK
201: LMKLRSKGVR GRGGVRKTDS IGNKSSKVSA AEPPKKATKK NRVWDDAAPK QVKLDFTDSV GENGNGNHDH VDIAAADQGE SMMDKEEVFS SDDESEDDDD
301: DEPRSDEKKP EAKKKGWFSS VFQSITGKAN LERTDLEPAL KALKERLMTK NVAEEIAEKL CESVEASLEG KKLASFTRIS STVQGAMEDA LIRILTPRRS
401: IDIMRDVHAA KEQRRPYVVV FVGVNGVGKS TNLAKVAYWL QQHKVSVMMA ACDTFRSGAV EQLRTHARRL QIPIFEKGYE KDPAVVAKEA IQEATRNGSD
501: VVLVDTAGRM QDNEPLMRAL SKLINLNKPD LVLFVGEALV GNDAVDQLSK FNQKLSDLSN SGTTRLIDGI LLTKFDTIDD KVGAALSMVY ISGAPVMFVG
601: CGQSYTDLKK LNVKAIVKTL LK
101: SYGDFDETFR QLRMEAEARG EELRKVKVVS SVKKQGQVSK SGLDGGIKSG GGGSKKDDGD GDKDKVGSLM TNGNHKDDDK TDLANGKENT ADNVVLDPSK
201: LMKLRSKGVR GRGGVRKTDS IGNKSSKVSA AEPPKKATKK NRVWDDAAPK QVKLDFTDSV GENGNGNHDH VDIAAADQGE SMMDKEEVFS SDDESEDDDD
301: DEPRSDEKKP EAKKKGWFSS VFQSITGKAN LERTDLEPAL KALKERLMTK NVAEEIAEKL CESVEASLEG KKLASFTRIS STVQGAMEDA LIRILTPRRS
401: IDIMRDVHAA KEQRRPYVVV FVGVNGVGKS TNLAKVAYWL QQHKVSVMMA ACDTFRSGAV EQLRTHARRL QIPIFEKGYE KDPAVVAKEA IQEATRNGSD
501: VVLVDTAGRM QDNEPLMRAL SKLINLNKPD LVLFVGEALV GNDAVDQLSK FNQKLSDLSN SGTTRLIDGI LLTKFDTIDD KVGAALSMVY ISGAPVMFVG
601: CGQSYTDLKK LNVKAIVKTL LK
001: MLEQLLIFTR GGLILWTCKE IGNALKGSPI DTLIRSCLLE ERSGAVSFNY DAPGAAYTLK WTFHNDLGLV FVAVYQRILH LLYVDDLLSM VKQSFSEVYD
101: PKRMAYDDFD ETFRQLRIEA EARAEELRKT KQVGKPVTSV KKQGQVSKPG LEGGNKRVSS EGGSKKDDGD GGNKAKVSTL TNGHSNGNHQ MEDDSQETND
201: LANGKENTSS NVAVDLSKLQ KLRSKGVRGR GGVRKTDSIG NKSSKVAEPA KKATKKNRVW DDAAPKQSKL DFTDSIDENG NNDHVDIVAA DQGESMMDKE
301: EVFSSDSESE DDDEPGSDEK PAQAKKKGWF SSVFQSITGK ANLERTDLGP ALKALKERLM TKNVAEEIAE KLCESVEASL EGKKLSSFTR ISSTVQAAME
401: DALVRILTPR RSIDILRDVH AAKEQRKPYV VVFVGVNGVG KSTNLAKVAY WLQQHKVSVM MAACDTFRSG AVEQLRTHAR RLQIPIFEKG YEKDPAVVAK
501: EAIQEATRNG SDVVLVDTAG RMQDNEPLMR ALSKLINLNQ PDLVLFVGEA LVGNDAVDQL SKFNQKLSDL STSGNPRLID GILLTKFDTI DDKVGAALSM
601: VYISGSPVMF VGCGQSYTDL KKLNVKAIVK TLLK
101: PKRMAYDDFD ETFRQLRIEA EARAEELRKT KQVGKPVTSV KKQGQVSKPG LEGGNKRVSS EGGSKKDDGD GGNKAKVSTL TNGHSNGNHQ MEDDSQETND
201: LANGKENTSS NVAVDLSKLQ KLRSKGVRGR GGVRKTDSIG NKSSKVAEPA KKATKKNRVW DDAAPKQSKL DFTDSIDENG NNDHVDIVAA DQGESMMDKE
301: EVFSSDSESE DDDEPGSDEK PAQAKKKGWF SSVFQSITGK ANLERTDLGP ALKALKERLM TKNVAEEIAE KLCESVEASL EGKKLSSFTR ISSTVQAAME
401: DALVRILTPR RSIDILRDVH AAKEQRKPYV VVFVGVNGVG KSTNLAKVAY WLQQHKVSVM MAACDTFRSG AVEQLRTHAR RLQIPIFEKG YEKDPAVVAK
501: EAIQEATRNG SDVVLVDTAG RMQDNEPLMR ALSKLINLNQ PDLVLFVGEA LVGNDAVDQL SKFNQKLSDL STSGNPRLID GILLTKFDTI DDKVGAALSM
601: VYISGSPVMF VGCGQSYTDL KKLNVKAIVK TLLK
Arabidopsis Description
AT4g30600/F17I23_60 [Source:UniProtKB/TrEMBL;Acc:Q9M0A0]
SUBAcon: [endoplasmic reticulum]
SUBAcon: [endoplasmic reticulum]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.