CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P20650_001	Banana	cytosol	58.44	53.41
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	61.36	39.71
KRH03040	Soybean	endoplasmic reticulum	78.25	38.5
VIT_11s0037g00300.t01	Wine grape	endoplasmic reticulum	73.38	36.69
GSMUA_Achr11P...	Banana	endoplasmic reticulum	65.91	36.06
KRH54944	Soybean	endoplasmic reticulum	72.4	35.79
Solyc12g009990.1.1	Tomato	endoplasmic reticulum, extracellular	71.43	35.54
PGSC0003DMT400020462	Potato	endoplasmic reticulum, extracellular	70.78	35.22
Bra024060.1-P	Field mustard	cytosol, endoplasmic reticulum	67.53	33.88
AT4G30600.1	Thale cress	endoplasmic reticulum	69.48	33.75
CDY39221	Canola	cytosol, endoplasmic reticulum	67.21	33.66
CDX72255	Canola	cytosol, endoplasmic reticulum	67.21	33.6
Bra014811.1-P	Field mustard	cytosol, endoplasmic reticulum	57.47	33.59
TraesCS5A01G534900.1	Wheat	golgi	69.48	33.33
TraesCS4B01G367200.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plastid	69.81	33.33
CDY28196	Canola	endoplasmic reticulum	67.21	33.28
Bra011203.1-P	Field mustard	endoplasmic reticulum	67.21	33.28
TraesCS4D01G360300.1	Wheat	cytosol, golgi, mitochondrion, plastid	69.16	32.97
EER93028	Sorghum	cytosol, endoplasmic reticulum, mitochondrion, plastid	66.56	32.85
CDX68673	Canola	extracellular	66.88	32.8
Zm00001d027293_P004	Maize	cytosol, endoplasmic reticulum, mitochondrion, plastid	66.23	32.33
TraesCS6B01G129300.1	Wheat	endoplasmic reticulum	62.34	31.58
TraesCS6A01G101200.1	Wheat	endoplasmic reticulum	62.66	31.54
TraesCS6D01G089600.1	Wheat	endoplasmic reticulum	62.01	31.52
EES17686	Sorghum	endoplasmic reticulum, extracellular	58.77	30.78
HORVU6Hr1G018280.1	Barley	cytosol, endoplasmic reticulum	62.99	30.65
KRH65131	Soybean	plastid	21.1	17.47
KRH48224	Soybean	plastid	20.45	16.94
KRH44479	Soybean	cytosol	19.81	12.32
KRH09713	Soybean	cytosol	19.81	12.22
KRH23593	Soybean	cytosol	19.81	12.2
KRH47429	Soybean	cytosol, endoplasmic reticulum, nucleus	19.48	12.12
KRH67940	Soybean	plastid	20.78	11.33

Protein Annotations

MapMan:23.3.1.2.1	Gene3D:3.40.50.300	UniProt:A0A0R0L4Y4	EMBL:ACUP02001199	EnsemblPlantsGene:GLYMA_02G204600	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006614	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	EnsemblPlants:KRH72313
ProteinID:KRH72313	ProteinID:KRH72313.1	InterPro:P-loop_NTPase	PFAM:PF00448	PANTHER:PTHR43134	PANTHER:PTHR43134:SF4
SMART:SM00962	InterPro:SRP54_GTPase_dom	SUPFAM:SSF52540	TMHMM:TMhelix	UniParc:UPI0006EDC29C	SEG:seg

Description

hypothetical protein

Coordinates

chr2:-:38988051..38991313

Molecular Weight (calculated)

34056.5 Da

IEP (calculated)

9.486

GRAVY (calculated)

-0.100

Length

308 amino acids

Sequence
(BLAST)

001: MANLSIVVQG QGEAESLREL CFVVANVNAK HSGGIGKENE SSHVGAFDVS RLQKLKGKKG NGKKKDALVV AAAAMEEPKK VDKRSRGKAN LEKSDLEPAL
101: KALKDRLMTK NVTAMEEALV PILTPRRSID ILRDVYAAKE QRKPYVVVFV GVGKSTNLAK VAYWLLQHNI SVMMAACDTF RSGAVEQLRT HARRLQIPIF
201: EKGYEKDPAI VAKEAIQEAS RNGSDVVLVD TAGCMQDNEP LMRALSKLVY LNNPNLILFV GEALVGNDAV DQLAKFNQAW FYILDIFVQL QFCFCLSFSY
301: ISVIQPRN

Best Arabidopsis Sequence Match ( AT4G30600.2 )
(BLAST)

001: MLEQLLIFTR GGLILWTCKE IGNALKGSPI DTLIRSCLLE ERSGAVSFNY DAPGAAYTLK WTFHNDLGLV FVAVYQRILH LLYVDDLLSM VKQSFSEVYD
101: PKRMAYDDFD ETFRQLRIEA EARAEELRKT KQVGKPVTSV KKQGQVSKPG LEGGNKRVSS EGGSKKDDGD GGNKAKVSTL TNGHSNGNHQ MEDDSQETND
201: LANGKENTSS NVAVDLSKLQ KLRSKGVRGR GGVRKTDSIG NKSSKVAEPA KKATKKNRVW DDAAPKQSKL DFTDSIDENG NNDHVDIVAA DQGESMMDKE
301: EVFSSDSESE DDDEPGSDEK PAQAKKKGWF SSVFQSITGK ANLERTDLGP ALKALKERLM TKNVAEEIAE KLCESVEASL EGKKLSSFTR ISSTVQAAME
401: DALVRILTPR RSIDILRDVH AAKEQRKPYV VVFVGVNGVG KSTNLAKVAY WLQQHKVSVM MAACDTFRSG AVEQLRTHAR RLQIPIFEKG YEKDPAVVAK
501: EAIQEATRNG SDVVLVDTAG RMQDNEPLMR ALSKLINLNQ PDLVLFVGEA LVGNDAVDQL SKFNQKLSDL STSGNPRLID GILLTKFDTI DDKVGAALSM
601: VYISGSPVMF VGCGQSYTDL KKLNVKAIVK TLLK

Arabidopsis Description

AT4g30600/F17I23_60 [Source:UniProtKB/TrEMBL;Acc:Q9M0A0]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.