Factsheet for HORVU6Hr1G018280.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, cytosol

Predictor Summary:

endoplasmic reticulum 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, endoplasmic reticulum
Any Predictor:	cytosol, endoplasmic reticulum
MultiLoc:	endoplasmic reticulum
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G089600.1	Wheat	endoplasmic reticulum	87.99	91.91
TraesCS6B01G129300.1	Wheat	endoplasmic reticulum	88.15	91.78
TraesCS6A01G101200.1	Wheat	endoplasmic reticulum	88.63	91.67
GSMUA_Achr5P20650_001	Banana	cytosol	44.71	83.98
GSMUA_Achr11P...	Banana	endoplasmic reticulum	61.77	69.45
EES17686	Sorghum	endoplasmic reticulum, extracellular	62.09	66.84
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	50.24	66.81
VIT_11s0037g00300.t01	Wine grape	endoplasmic reticulum	63.19	64.94
KRH72313	Soybean	cytosol	30.65	62.99
KRH54944	Soybean	endoplasmic reticulum	61.3	62.28
KRH03040	Soybean	endoplasmic reticulum	61.45	62.14
Solyc12g009990.1.1	Tomato	endoplasmic reticulum, extracellular	60.19	61.55
PGSC0003DMT400020462	Potato	endoplasmic reticulum, extracellular	59.87	61.23
Bra024060.1-P	Field mustard	cytosol, endoplasmic reticulum	59.24	61.07
CDX72255	Canola	cytosol, endoplasmic reticulum	59.24	60.88
CDY39221	Canola	cytosol, endoplasmic reticulum	58.93	60.65
Bra011203.1-P	Field mustard	endoplasmic reticulum	59.4	60.45
CDY28196	Canola	endoplasmic reticulum	59.4	60.45
CDX68673	Canola	extracellular	59.87	60.35
AT4G30600.1	Thale cress	endoplasmic reticulum	60.35	60.25
Bra014811.1-P	Field mustard	cytosol, endoplasmic reticulum	46.45	55.79
HORVU2Hr1G125480.2	Barley	cytosol	8.53	27.41
HORVU5Hr1G019120.2	Barley	cytosol	8.21	27.08
HORVU6Hr1G029680.1	Barley	cytosol	8.21	27.08
HORVU7Hr1G036330.1	Barley	cytosol	9.32	24.48
HORVU2Hr1G097520.1	Barley	cytosol	8.37	23.87
HORVU3Hr1G110160.4	Barley	mitochondrion	15.01	23.81
HORVU3Hr1G075590.1	Barley	cytosol	6.48	21.35
HORVU4Hr1G021950.4	Barley	plastid	15.96	18.2
HORVU4Hr1G021960.1	Barley	plastid	15.8	17.83
HORVU2Hr1G020570.1	Barley	plasma membrane	13.27	16.9
HORVU1Hr1G077990.4	Barley	cytosol	13.43	16.87

Protein Annotations

Gene3D:1.20.120.140	MapMan:23.3.1.2.1	Gene3D:3.30.450.60	Gene3D:3.40.50.300	UniProt:A0A287TGX8	InterPro:AAA+_ATPase
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0003924	GO:GO:0005047	GO:GO:0005488
GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783
GO:GO:0005785	GO:GO:0006614	GO:GO:0006810	GO:GO:0006886	GO:GO:0008150	GO:GO:0016020
GO:GO:0016192	GO:GO:0016787	EnsemblPlantsGene:HORVU6Hr1G018280	EnsemblPlants:HORVU6Hr1G018280.1	InterPro:Longin-like_dom_sf	InterPro:P-loop_NTPase
PFAM:PF00448	PFAM:PF02881	PFAM:PF04086	ScanProsite:PS00300	PANTHER:PTHR43134	PANTHER:PTHR43134:SF4
SMART:SM00382	SMART:SM00962	SMART:SM00963	InterPro:SRP/SRP_N	InterPro:SRP54_GTPase_dom	SUPFAM:SSF47364
SUPFAM:SSF52540	SUPFAM:SSF64356	InterPro:Sig_recog_particle_rcpt_asu_N	InterPro:Signal_recog_particl_SRP54_hlx	UniParc:UPI000B479222	SEG:seg

Description

No Description!

Coordinates

chrchr6H:+:45740054..45742230

Molecular Weight (calculated)

68743.5 Da

IEP (calculated)

8.405

GRAVY (calculated)

-0.407

Length

633 amino acids

Sequence
(BLAST)

001: VPLASFRDQY PLRRRRQSQG FRRIADEMLE ELLIFTRGGL ILWSLAGAAA ALKGSPIDAL VRSFLLEGRS ASAGFTHGPY ALRWAYDNAL GLVLIAVYRR
101: VLHLLYVDDL LAAISAEFAR IYHPRRASYD EFGERFRQLH LEAEARASRP HSVSAKPGPA DSSPGALQLN GGGGGGGGGE GEKTGDESGK DDSDGEPSRQ
201: EEHSSAADGS FNGVEENSDA GHGGAVVRTE EEGGSNNGAF NFENIKKSLF PRNDKDKRDK PPHKGKKQRL GKDQTPVSKD KKPSEKKLDY SNPADHGRRA
301: GEQTAVNQGK SMMDKDEAVR STTKDGWFSS MFRSIAGSNA ELEESDLQPA LKSLKDRLMT KNVAEEIAEK LCESVAASLL GKKLGSFTRI SSSVQTAMEE
401: ALVRILTPRR SIDVLRDVHA AKDRGTPYVI VFVGVNGVGK STNLAKVAYW LLQHDLSVTL AACDTFRSGA VEQLRTHARR LQIPIFEKGY ERDPAVVAKG
501: AIQEATRNKS DVVLVDTAGR MQDNEPLMRA LSKLINLNNP DLVLFVGEAL VGNDAVDQLT KFSQKLADLS TAPTARSIDG ILLTKFDTID DKVGAALSMV
601: YVSGAPVMFV GCGQSYTDLK KLNVKSIVNT LLE

Best Arabidopsis Sequence Match ( AT4G30600.2 )
(BLAST)

001: MLEQLLIFTR GGLILWTCKE IGNALKGSPI DTLIRSCLLE ERSGAVSFNY DAPGAAYTLK WTFHNDLGLV FVAVYQRILH LLYVDDLLSM VKQSFSEVYD
101: PKRMAYDDFD ETFRQLRIEA EARAEELRKT KQVGKPVTSV KKQGQVSKPG LEGGNKRVSS EGGSKKDDGD GGNKAKVSTL TNGHSNGNHQ MEDDSQETND
201: LANGKENTSS NVAVDLSKLQ KLRSKGVRGR GGVRKTDSIG NKSSKVAEPA KKATKKNRVW DDAAPKQSKL DFTDSIDENG NNDHVDIVAA DQGESMMDKE
301: EVFSSDSESE DDDEPGSDEK PAQAKKKGWF SSVFQSITGK ANLERTDLGP ALKALKERLM TKNVAEEIAE KLCESVEASL EGKKLSSFTR ISSTVQAAME
401: DALVRILTPR RSIDILRDVH AAKEQRKPYV VVFVGVNGVG KSTNLAKVAY WLQQHKVSVM MAACDTFRSG AVEQLRTHAR RLQIPIFEKG YEKDPAVVAK
501: EAIQEATRNG SDVVLVDTAG RMQDNEPLMR ALSKLINLNQ PDLVLFVGEA LVGNDAVDQL SKFNQKLSDL STSGNPRLID GILLTKFDTI DDKVGAALSM
601: VYISGSPVMF VGCGQSYTDL KKLNVKAIVK TLLK

Arabidopsis Description

AT4g30600/F17I23_60 [Source:UniProtKB/TrEMBL;Acc:Q9M0A0]
SUBAcon: [endoplasmic reticulum]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.