Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G029680.1 | Barley | cytosol | 100.0 | 100.0 |
| HORVU2Hr1G125480.2 | Barley | cytosol | 92.19 | 89.85 |
| HORVU7Hr1G036330.1 | Barley | cytosol | 84.38 | 67.22 |
| HORVU2Hr1G097520.1 | Barley | cytosol | 64.58 | 55.86 |
| HORVU3Hr1G075590.1 | Barley | cytosol | 55.73 | 55.73 |
| TraesCS3D01G308700.1 | Wheat | cytosol, mitochondrion | 90.1 | 35.74 |
| TraesCS3B01G342900.1 | Wheat | cytosol | 89.58 | 35.54 |
| TraesCS3A01G322800.1 | Wheat | mitochondrion | 89.58 | 35.54 |
| CDY10656 | Canola | cytosol | 35.94 | 35.2 |
| CDY16472 | Canola | cytosol | 71.35 | 34.95 |
| Zm00001d043303_P001 | Maize | cytosol | 81.25 | 31.58 |
| Os01t0772800-01 | Rice | plasma membrane | 81.25 | 31.45 |
| CDY36546 | Canola | cytosol | 77.6 | 31.11 |
| EES01544 | Sorghum | cytosol | 80.21 | 31.05 |
| CDY39632 | Canola | cytosol | 77.6 | 31.04 |
| Zm00001d012652_P003 | Maize | extracellular | 80.73 | 31.0 |
| Bra026145.1-P | Field mustard | cytosol | 77.08 | 30.9 |
| KRH47429 | Soybean | cytosol, endoplasmic reticulum, nucleus | 79.17 | 30.71 |
| VIT_09s0002g07290.t01 | Wine grape | cytosol | 79.17 | 30.71 |
| HORVU2Hr1G020570.1 | Barley | plasma membrane | 79.17 | 30.58 |
| KRH44479 | Soybean | cytosol | 78.65 | 30.51 |
| Bra018760.1-P | Field mustard | cytosol | 78.65 | 30.51 |
| KRH09713 | Soybean | cytosol | 79.17 | 30.46 |
| CDX77276 | Canola | cytosol | 78.65 | 30.44 |
| Bra014161.1-P | Field mustard | cytosol | 78.65 | 30.44 |
| KRH23593 | Soybean | cytosol | 79.17 | 30.4 |
| CDY40616 | Canola | cytosol | 78.12 | 30.3 |
| CDX93702 | Canola | cytosol | 78.12 | 30.3 |
| AT1G48900.1 | Thale cress | cytosol | 77.6 | 30.1 |
| AT1G15310.1 | Thale cress | cytosol | 75.0 | 30.06 |
| PGSC0003DMT400001674 | Potato | cytosol | 77.6 | 29.98 |
| HORVU1Hr1G077990.4 | Barley | cytosol | 78.65 | 29.96 |
| Solyc12g042740.1.1 | Tomato | cytosol | 77.6 | 29.86 |
| PGSC0003DMT400073698 | Potato | cytosol | 77.08 | 29.66 |
| CDY17067 | Canola | cytosol, nucleus | 46.35 | 27.55 |
| CDY46694 | Canola | cytosol | 43.75 | 27.1 |
| AT5G49500.1 | Thale cress | cytosol | 68.23 | 26.36 |
| Solyc03g116810.2.1 | Tomato | nucleus | 78.65 | 25.59 |
| AT5G66970.1 | Thale cress | cytosol | 22.92 | 25.14 |
| GSMUA_Achr9P25680_001 | Banana | cytosol | 54.17 | 23.85 |
| Bra014039.1-P | Field mustard | cytosol | 46.88 | 21.9 |
| HORVU3Hr1G110160.4 | Barley | mitochondrion | 29.17 | 14.04 |
| HORVU4Hr1G021950.4 | Barley | plastid | 33.85 | 11.71 |
| HORVU4Hr1G021960.1 | Barley | plastid | 32.29 | 11.05 |
| HORVU6Hr1G018280.1 | Barley | cytosol, endoplasmic reticulum | 27.08 | 8.21 |
Protein Annotations
| MapMan:23.3.1.1.5 | Gene3D:3.40.50.300 | UniProt:A0A287QIY1 | InterPro:AAA+_ATPase | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0003924 | GO:GO:0005488 | GO:GO:0005525 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006614 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016787 |
| GO:GO:0048500 | EnsemblPlantsGene:HORVU5Hr1G019120 | EnsemblPlants:HORVU5Hr1G019120.2 | InterPro:P-loop_NTPase | PFAM:PF00448 | PANTHER:PTHR11564 |
| PANTHER:PTHR11564:SF5 | SMART:SM00382 | SMART:SM00962 | InterPro:SRP54 | InterPro:SRP54_GTPase_dom | SUPFAM:SSF52540 |
| UniParc:UPI000B47B887 | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:-:81679530..81681603
Molecular Weight (calculated)
20789.4 Da
IEP (calculated)
8.900
GRAVY (calculated)
0.107
Length
192 amino acids
Sequence
(BLAST)
(BLAST)
001: MLDAGKLAFA PKKGKPCVVM FVGLQGSGKT TTCMKYAHYH QKIGFKPALV CADTFRAGAF DQLKQNATKI MVPFYGSYME SDPVKIVVEG VEMFRKENCD
101: LIIVDTSGRH KQEATLFEET RQVSEATKPD LVIFVMDGSI GQATFAHAQA FRQSVPVGAV IVTKTDGHAK GGGALTVLVF TSLILHYPLG AI
101: LIIVDTSGRH KQEATLFEET RQVSEATKPD LVIFVMDGSI GQATFAHAQA FRQSVPVGAV IVTKTDGHAK GGGALTVLVF TSLILHYPLG AI
001: MVLAELGGRI TRAIQQMNNV TIIDEKVLND FLNEITRALL QSDVSFGLVE KMQTNIKKIV NLDDLAAGHN KRLIIEQAIF KELCRMLDPG KPAFAPKKAK
101: PSVVMFVGLQ GAGKTTTCTK YAYYHQKKGY KAALVCADTF RAGAFDQLKQ NATKAKIPFY GSYTESDPVK IAVEGVDRFK KEKCDLIIVD TSGRHKQAAS
201: LFEEMRQVAE ATEPDLVIFV MDSSIGQAAF EQAEAFKETV SVGAVIITKM DGHAKGGGAL SAVAATKSPV IFIGTGEHMD EFEVFDVKPF VSRLLGKGDW
301: SGLVDKLQEV VPKDLQNELV ENLSQGNFTL RSMYDQFQCS LRIPLNQLFS MLPGISAEMM PKGHGEESRV KMKRYMTMMD SMTNKELDSP NPKIFNESRI
401: MRIARGSGRL VREVMEMLEE YKRIAKTMKG IKIPKNGDMS KVIPPQMLKQ MGGMSGLQSL MKQMGSAKDM MGMFGGGGK
101: PSVVMFVGLQ GAGKTTTCTK YAYYHQKKGY KAALVCADTF RAGAFDQLKQ NATKAKIPFY GSYTESDPVK IAVEGVDRFK KEKCDLIIVD TSGRHKQAAS
201: LFEEMRQVAE ATEPDLVIFV MDSSIGQAAF EQAEAFKETV SVGAVIITKM DGHAKGGGAL SAVAATKSPV IFIGTGEHMD EFEVFDVKPF VSRLLGKGDW
301: SGLVDKLQEV VPKDLQNELV ENLSQGNFTL RSMYDQFQCS LRIPLNQLFS MLPGISAEMM PKGHGEESRV KMKRYMTMMD SMTNKELDSP NPKIFNESRI
401: MRIARGSGRL VREVMEMLEE YKRIAKTMKG IKIPKNGDMS KVIPPQMLKQ MGGMSGLQSL MKQMGSAKDM MGMFGGGGK
Arabidopsis Description
SRP-54ASignal recognition particle 54 kDa protein [Source:UniProtKB/TrEMBL;Acc:Q56XJ0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.