Factsheet for HORVU3Hr1G110160.4

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU0Hr1G027080.4
HORVU3Hr1G013690.6
HORVU4Hr1G021950.4
HORVU4Hr1G021960.1
HORVU6Hr1G062870.1
HORVU6Hr1G069310.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G45770.1	HORVU3Hr1G013690.6	AT2G28800.1	14517205
AT2G45770.1	HORVU6Hr1G069310.1	AT3G27960.1	21798944
AT2G45770.1	HORVU0Hr1G027080.4	AT3G48150.1	21798944
AT2G45770.1	HORVU6Hr1G062870.1	AT3G48150.1	21798944
AT2G45770.1	HORVU4Hr1G021950.4	AT5G03940.1	14517205
AT2G45770.1	HORVU4Hr1G021960.1	AT5G03940.1	14517205

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G561300.1	Wheat	plastid	86.97	97.2
TraesCSU01G058200.1	Wheat	plastid	87.22	96.67
TraesCS3A01G498300.1	Wheat	plastid	86.22	95.82
EES04254	Sorghum	plastid	79.95	87.16
Os01t0958100-01	Rice	plastid	78.95	86.78
KRH65131	Soybean	plastid	69.67	74.73
KRH48224	Soybean	plastid	69.42	74.46
Zm00001d042044_P001	Maize	plastid	79.95	74.36
VIT_15s0048g02080.t01	Wine grape	plastid	67.92	73.84
CDY18901	Canola	plastid	66.67	73.68
CDY37064	Canola	plastid	67.67	73.37
CDX74765	Canola	plastid	67.17	72.83
CDY27360	Canola	plastid	66.92	72.75
Bra004937.1-P	Field mustard	plastid	66.92	72.55
AT2G45770.1	Thale cress	plastid	66.42	72.4
Bra039315.1-P	Field mustard	plastid	56.89	72.06
PGSC0003DMT400071384	Potato	plastid	66.42	72.01
Solyc01g091580.2.1	Tomato	plastid	66.17	71.74
GSMUA_Achr11P...	Banana	plastid	68.17	71.2
HORVU5Hr1G019120.2	Barley	cytosol	14.04	29.17
HORVU6Hr1G029680.1	Barley	cytosol	14.04	29.17
HORVU2Hr1G125480.2	Barley	cytosol	13.78	27.92
HORVU7Hr1G036330.1	Barley	cytosol	16.04	26.56
HORVU2Hr1G097520.1	Barley	cytosol	14.54	26.13
HORVU3Hr1G075590.1	Barley	cytosol	10.28	21.35
HORVU2Hr1G020570.1	Barley	plasma membrane	21.05	16.9
HORVU1Hr1G077990.4	Barley	cytosol	21.05	16.67
HORVU4Hr1G021960.1	Barley	plastid	23.31	16.58
HORVU4Hr1G021950.4	Barley	plastid	23.06	16.58
HORVU6Hr1G018280.1	Barley	cytosol, endoplasmic reticulum	23.81	15.01

Protein Annotations

Gene3D:1.20.120.140	MapMan:23.1.7.4	Gene3D:3.40.50.300	UniProt:A0A287MNL4	InterPro:AAA+_ATPase	GO:GO:0000166
GO:GO:0003674	GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0006614	GO:GO:0006810	GO:GO:0008150	EnsemblPlantsGene:HORVU3Hr1G110160	EnsemblPlants:HORVU3Hr1G110160.4	HAMAP:MF_00920
InterPro:P-loop_NTPase	PFAM:PF00448	PFAM:PF02881	ScanProsite:PS00300	PANTHER:PTHR43134	PANTHER:PTHR43134:SF2
SMART:SM00382	SMART:SM00962	SMART:SM00963	InterPro:SRP/SRP_N	InterPro:SRP54_GTPase_dom	InterPro:SR_rcpt_FtsY
SUPFAM:SSF47364	SUPFAM:SSF52540	InterPro:Signal_recog_particl_SRP54_hlx	TIGRFAMs:TIGR00064	UniParc:UPI000B475A6C	SEG:seg

Description

No Description!

Coordinates

chrchr3H:-:680226874..680230715

Molecular Weight (calculated)

43181.3 Da

IEP (calculated)

9.801

GRAVY (calculated)

-0.109

Length

399 amino acids

Sequence
(BLAST)

001: MQKDVVKYIF AAKKKNSTFA RASSALSSHH PSLRRYPQPA SAQRMASAPS RALPFLSPPS TAPRAPSVRL RCAAAAGQAG FFTRLGRLIK EKAKSDVDKL
101: FSGFSKTREN LSVVDELLTY WNLADTDRVL DDLEEALLVS DFGPKISFRI VDTLRDEIRD GKLKSGTEIK ASLKRCILEL LTTKGSKTEL QLGFRKPAVI
201: MIVGVNGGGK TTSLGKLAHR FKNEGAKVLM AAGDTFRAAA RDQLEIWAER TGSEIVIDND KKAQAPSVLS QAVKRGKREG FDIVLCDTSG RLHTNYGLME
301: ELVSCKKVIA KALPGAPNEI LLVLDGTTGL NMLQQAKEFN DVVGITGFIL TKLDGTARGG CVVSVVDELG IPVKFVGVGE GVEDLQPFDA EAFVEAIFP

Best Arabidopsis Sequence Match ( AT2G45770.1 )
(BLAST)

001: MATSSAHLSF LAGRISPFSS ERIGLFPLRG EFRPRMTRFR CSAGPSGFFT RLGRLIKEKA KSDVEKVFSG FSKTRENLAV IDELLLFWNL AETDRVLDEL
101: EEALLVSDFG PKITVRIVER LREDIMSGKL KSGSEIKDAL KESVLEMLAK KNSKTELQLG FRKPAVIMIV GVNGGGKTTS LGKLAHRLKN EGTKVLMAAG
201: DTFRAAASDQ LEIWAERTGC EIVVAEGDKA KAATVLSKAV KRGKEEGYDV VLCDTSGRLH TNYSLMEELI ACKKAVGKIV SGAPNEILLV LDGNTGLNML
301: PQAREFNEVV GITGLILTKL DGSARGGCVV SVVEELGIPV KFIGVGEAVE DLQPFDPEAF VNAIFS

Arabidopsis Description

CPFTSYCell division protein FtsY homolog, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O80842]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.