Factsheet for TraesCS3B01G561300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G075700.1
TraesCS3B01G089800.1
TraesCS3D01G075800.1
TraesCS4A01G197600.1
TraesCS4A01G197700.1
TraesCS4B01G117800.1
TraesCS4B01G117900.1
TraesCS4B01G326700.1
TraesCS4D01G115500.1
TraesCS4D01G115600.1
TraesCS4D01G323400.1
TraesCS5A01G498700.1
TraesCS6A01G251400.1
TraesCS6A01G274500.1
TraesCS6B01G273900.1
TraesCS6B01G302000.1
TraesCS6D01G233200.1
TraesCS6D01G254800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G45770.1	TraesCS3A01G075700.1	AT2G28800.1	14517205
AT2G45770.1	TraesCS3B01G089800.1	AT2G28800.1	14517205
AT2G45770.1	TraesCS3D01G075800.1	AT2G28800.1	14517205
AT2G45770.1	TraesCS4B01G326700.1	AT2G47450.1	14517205
AT2G45770.1	TraesCS4D01G323400.1	AT2G47450.1	14517205
AT2G45770.1	TraesCS5A01G498700.1	AT2G47450.1	14517205
AT2G45770.1	TraesCS6A01G274500.1	AT3G27960.1	21798944
AT2G45770.1	TraesCS6B01G302000.1	AT3G27960.1	21798944
AT2G45770.1	TraesCS6D01G254800.1	AT3G27960.1	21798944
AT2G45770.1	TraesCS6A01G251400.1	AT3G48150.1	21798944
AT2G45770.1	TraesCS6B01G273900.1	AT3G48150.1	21798944
AT2G45770.1	TraesCS6D01G233200.1	AT3G48150.1	21798944
AT2G45770.1	TraesCS4A01G197600.1	AT5G03940.1	14517205
AT2G45770.1	TraesCS4A01G197700.1	AT5G03940.1	14517205
AT2G45770.1	TraesCS4B01G117800.1	AT5G03940.1	14517205
AT2G45770.1	TraesCS4B01G117900.1	AT5G03940.1	14517205
AT2G45770.1	TraesCS4D01G115500.1	AT5G03940.1	14517205
AT2G45770.1	TraesCS4D01G115600.1	AT5G03940.1	14517205

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G058200.1	Wheat	plastid	96.92	96.11
TraesCS3A01G498300.1	Wheat	plastid	96.64	96.1
HORVU3Hr1G110160.4	Barley	mitochondrion	97.2	86.97
EES04254	Sorghum	plastid	88.8	86.61
Os01t0958100-01	Rice	plastid	87.96	86.5
KRH65131	Soybean	plastid	78.15	75.0
KRH48224	Soybean	plastid	77.59	74.46
Zm00001d042044_P001	Maize	plastid	88.8	73.89
VIT_15s0048g02080.t01	Wine grape	plastid	75.63	73.57
CDY18901	Canola	plastid	73.67	72.85
CDY37064	Canola	plastid	74.79	72.55
CDX74765	Canola	plastid	74.51	72.28
Bra004937.1-P	Field mustard	plastid	74.23	72.01
CDY27360	Canola	plastid	73.95	71.93
AT2G45770.1	Thale cress	plastid	73.39	71.58
PGSC0003DMT400071384	Potato	plastid	73.67	71.47
Solyc01g091580.2.1	Tomato	plastid	73.67	71.47
Bra039315.1-P	Field mustard	plastid	62.75	71.11
GSMUA_Achr11P...	Banana	plastid	75.91	70.94
TraesCS3B01G342900.1	Wheat	cytosol	23.25	17.15
TraesCS4B01G117800.1	Wheat	plastid	26.61	17.15
TraesCS1B01G340600.1	Wheat	golgi, plastid	23.81	17.1
TraesCS1B01G340700.1	Wheat	cytosol	22.69	16.4
TraesCS4B01G117900.1	Wheat	plastid	26.33	15.8
TraesCS4B01G367200.1	Wheat	cytosol, endoplasmic reticulum, mitochondrion, plastid	27.45	15.19
TraesCS6B01G129300.1	Wheat	endoplasmic reticulum	25.49	14.97

Protein Annotations

Gene3D:1.20.120.140	MapMan:23.1.7.4	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005525	GO:GO:0006614	GO:GO:0006810	GO:GO:0008150	InterPro:P-loop_NTPase
PFAM:PF00448	PFAM:PF02881	ScanProsite:PS00300	PANTHER:PTHR43134	PANTHER:PTHR43134:SF2	SMART:SM00382
SMART:SM00962	SMART:SM00963	InterPro:SRP/SRP_N	InterPro:SRP54_GTPase_dom	InterPro:SR_rcpt_FtsY	SUPFAM:SSF47364
SUPFAM:SSF52540	InterPro:Signal_recog_particl_SRP54_hlx	TIGRFAMs:TIGR00064	EnsemblPlantsGene:TraesCS3B01G561300	EnsemblPlants:TraesCS3B01G561300.1	TIGR:cd03115

Description

No Description!

Coordinates

chr3B:-:794867967..794870588

Molecular Weight (calculated)

38338.5 Da

IEP (calculated)

8.464

GRAVY (calculated)

-0.006

Length

357 amino acids

Sequence
(BLAST)

001: MTSASAPSRA LPFLSPLSAA PRGPSGRLRC AAAAGQAGFF TRLGRLIKEK AKSDVDKLFS GFSKTRETLS VVDELLTYWN LADTDRVLDD LEEALLVSDF
101: GPKISFRIVD ALRDQIRDGK LKSGTEIKAS LKRCILELLT TKGSKTELQL GFRKPAVIMI VGVNGGGKTT SLGKLAYRFK NEGAKVLMAA GDTFRAAARD
201: QLEIWAERTG SEIVIDNDKK AQAPSVLSQA VKRGKREGFD IVLCDTSGRL HTNYGLMEEL VSCKKVIAKA LPGAPNEILL VLDGTTGLNM LQQAKEFNDV
301: VGITGFILTK LDGTARGGCV VSVVDELGIP VKFVGVGEGV EDLQPFDAEA FVEAIFP

Best Arabidopsis Sequence Match ( AT2G45770.1 )
(BLAST)

001: MATSSAHLSF LAGRISPFSS ERIGLFPLRG EFRPRMTRFR CSAGPSGFFT RLGRLIKEKA KSDVEKVFSG FSKTRENLAV IDELLLFWNL AETDRVLDEL
101: EEALLVSDFG PKITVRIVER LREDIMSGKL KSGSEIKDAL KESVLEMLAK KNSKTELQLG FRKPAVIMIV GVNGGGKTTS LGKLAHRLKN EGTKVLMAAG
201: DTFRAAASDQ LEIWAERTGC EIVVAEGDKA KAATVLSKAV KRGKEEGYDV VLCDTSGRLH TNYSLMEELI ACKKAVGKIV SGAPNEILLV LDGNTGLNML
301: PQAREFNEVV GITGLILTKL DGSARGGCVV SVVEELGIPV KFIGVGEAVE DLQPFDPEAF VNAIFS

Arabidopsis Description

CPFTSYCell division protein FtsY homolog, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O80842]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.