Factsheet for GSMUA_Achr11P07070_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
extracellular 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr2P09630_001
GSMUA_Achr5P28630_001
GSMUA_Achr9P03990_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G45770.1	GSMUA_Achr5P28630_001	AT2G28800.1	14517205
AT2G45770.1	GSMUA_Achr9P03990_001	AT2G28800.1	14517205
AT2G45770.1	GSMUA_Achr10P...	AT3G27960.1	21798944
AT2G45770.1	GSMUA_Achr2P09630_001	AT3G27960.1	21798944
AT2G45770.1	GSMUA_Achr11P...	AT3G48150.1	21798944
AT2G45770.1	GSMUA_Achr10P...	AT5G03940.1	14517205

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_15s0048g02080.t01	Wine grape	plastid	76.7	79.84
CDY18901	Canola	plastid	74.61	78.95
KRH65131	Soybean	plastid	76.44	78.49
KRH48224	Soybean	plastid	76.18	78.23
AT2G45770.1	Thale cress	plastid	74.87	78.14
PGSC0003DMT400071384	Potato	plastid	74.61	77.45
Solyc01g091580.2.1	Tomato	plastid	74.61	77.45
CDX74765	Canola	plastid	74.61	77.45
Bra004937.1-P	Field mustard	plastid	74.35	77.17
Os01t0958100-01	Rice	plastid	72.51	76.31
CDY27360	Canola	plastid	73.3	76.29
TraesCS3B01G561300.1	Wheat	plastid	70.94	75.91
TraesCSU01G058200.1	Wheat	plastid	71.47	75.83
CDY37064	Canola	plastid	73.04	75.82
TraesCS3A01G498300.1	Wheat	plastid	70.94	75.49
EES04254	Sorghum	plastid	72.25	75.41
Bra039315.1-P	Field mustard	plastid	61.52	74.6
HORVU3Hr1G110160.4	Barley	mitochondrion	71.2	68.17
Zm00001d042044_P001	Maize	plastid	71.99	64.1
GSMUA_Achr5P20650_001	Banana	cytosol	23.56	26.71
GSMUA_Achr11P...	Banana	cytosol, mitochondrion	25.13	20.17
GSMUA_Achr11P...	Banana	endoplasmic reticulum	25.92	17.58
GSMUA_Achr8P03120_001	Banana	cytosol	21.2	16.3
GSMUA_Achr10P...	Banana	plastid	23.56	15.65
GSMUA_Achr9P25680_001	Banana	cytosol	15.18	13.3

Protein Annotations

Gene3D:1.20.120.140	MapMan:23.1.7.4	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005525	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006614
GO:GO:0006810	GO:GO:0008150	EnsemblPlantsGene:GSMUA_Achr11G07070_001	EnsemblPlants:GSMUA_Achr11P07070_001	EnsemblPlants:GSMUA_Achr11T07070_001	UniProt:M0RQ37
InterPro:P-loop_NTPase	PFAM:PF00448	PFAM:PF02881	ScanProsite:PS00300	PANTHER:PTHR43134	PANTHER:PTHR43134:SF2
SMART:SM00382	SMART:SM00962	SMART:SM00963	InterPro:SRP/SRP_N	InterPro:SRP54_GTPase_dom	InterPro:SR_rcpt_FtsY
SUPFAM:SSF47364	SUPFAM:SSF52540	InterPro:Signal_recog_particl_SRP54_hlx	TIGRFAMs:TIGR00064	UniParc:UPI0002948F2C	SEG:seg

Description

Putative Cell division protein ftsY homolog [Source:GMGC_GENE;Acc:GSMUA_Achr11G07070_001]

Coordinates

chr11:+:5534899..5542929

Molecular Weight (calculated)

40746.4 Da

IEP (calculated)

8.573

GRAVY (calculated)

0.078

Length

382 amino acids

Sequence
(BLAST)

001: MAVAAPQVTV PFLSPPPPSS SSSSVAYGST SILLSRSRAS SALRLRRTGP AATRFRCAAG QTGFFTRLGR LIKEKAKSDV EKVFSGFSKT RENLAVVDEL
101: LLYWNLADTD RVLDELEEAL LVSDFGPRIS FKIVDCLRED ILAGKLKSGS EIKEALKRSV LQLLTSKGNK SDLQLGFRKP AVIMVVGVNG GGKTTSLGKL
201: ACRLKNEGVK VLLAAGDTFR AAASEQLEVW AERTGSEIVV AEGDKVKAAS VLSQAVRKGK EQGYDVVLCD TSGRLHTNYS LMEELVACKK AVAKVIPRAP
301: NEILLVLDGT TGLNMLPQAR EFNEVVGITG LILTKLDGSA RGGCVVSVVD ELGIPVKFVG VGEGVDDLQP FDAEAFVDAI FS

Best Arabidopsis Sequence Match ( AT2G45770.1 )
(BLAST)

001: MATSSAHLSF LAGRISPFSS ERIGLFPLRG EFRPRMTRFR CSAGPSGFFT RLGRLIKEKA KSDVEKVFSG FSKTRENLAV IDELLLFWNL AETDRVLDEL
101: EEALLVSDFG PKITVRIVER LREDIMSGKL KSGSEIKDAL KESVLEMLAK KNSKTELQLG FRKPAVIMIV GVNGGGKTTS LGKLAHRLKN EGTKVLMAAG
201: DTFRAAASDQ LEIWAERTGC EIVVAEGDKA KAATVLSKAV KRGKEEGYDV VLCDTSGRLH TNYSLMEELI ACKKAVGKIV SGAPNEILLV LDGNTGLNML
301: PQAREFNEVV GITGLILTKL DGSARGGCVV SVVEELGIPV KFIGVGEAVE DLQPFDPEAF VNAIFS

Arabidopsis Description

CPFTSYCell division protein FtsY homolog, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O80842]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.