Factsheet for TraesCS3A01G498300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G075700.1
TraesCS3B01G089800.1
TraesCS3D01G075800.1
TraesCS4A01G197600.1
TraesCS4A01G197700.1
TraesCS4B01G117800.1
TraesCS4B01G117900.1
TraesCS4B01G326700.1
TraesCS4D01G115500.1
TraesCS4D01G115600.1
TraesCS4D01G323400.1
TraesCS5A01G498700.1
TraesCS6A01G251400.1
TraesCS6A01G274500.1
TraesCS6B01G273900.1
TraesCS6B01G302000.1
TraesCS6D01G233200.1
TraesCS6D01G254800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G45770.1	TraesCS3A01G075700.1	AT2G28800.1	14517205
AT2G45770.1	TraesCS3B01G089800.1	AT2G28800.1	14517205
AT2G45770.1	TraesCS3D01G075800.1	AT2G28800.1	14517205
AT2G45770.1	TraesCS4B01G326700.1	AT2G47450.1	14517205
AT2G45770.1	TraesCS4D01G323400.1	AT2G47450.1	14517205
AT2G45770.1	TraesCS5A01G498700.1	AT2G47450.1	14517205
AT2G45770.1	TraesCS6A01G274500.1	AT3G27960.1	21798944
AT2G45770.1	TraesCS6B01G302000.1	AT3G27960.1	21798944
AT2G45770.1	TraesCS6D01G254800.1	AT3G27960.1	21798944
AT2G45770.1	TraesCS6A01G251400.1	AT3G48150.1	21798944
AT2G45770.1	TraesCS6B01G273900.1	AT3G48150.1	21798944
AT2G45770.1	TraesCS6D01G233200.1	AT3G48150.1	21798944
AT2G45770.1	TraesCS4A01G197600.1	AT5G03940.1	14517205
AT2G45770.1	TraesCS4A01G197700.1	AT5G03940.1	14517205
AT2G45770.1	TraesCS4B01G117800.1	AT5G03940.1	14517205
AT2G45770.1	TraesCS4B01G117900.1	AT5G03940.1	14517205
AT2G45770.1	TraesCS4D01G115500.1	AT5G03940.1	14517205
AT2G45770.1	TraesCS4D01G115600.1	AT5G03940.1	14517205

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G058200.1	Wheat	plastid	98.61	98.33
TraesCS3B01G561300.1	Wheat	plastid	96.1	96.64
EES04254	Sorghum	plastid	89.69	87.98
Os01t0958100-01	Rice	plastid	88.02	87.05
HORVU3Hr1G110160.4	Barley	mitochondrion	95.82	86.22
Zm00001d042044_P001	Maize	plastid	89.69	75.06
KRH65131	Soybean	plastid	76.88	74.19
CDY18901	Canola	plastid	74.09	73.68
KRH48224	Soybean	plastid	76.32	73.66
VIT_15s0048g02080.t01	Wine grape	plastid	74.93	73.3
CDX74765	Canola	plastid	74.65	72.83
CDY37064	Canola	plastid	74.65	72.83
Bra004937.1-P	Field mustard	plastid	74.37	72.55
AT2G45770.1	Thale cress	plastid	73.82	72.4
CDY27360	Canola	plastid	73.82	72.21
Bra039315.1-P	Field mustard	plastid	62.67	71.43
PGSC0003DMT400071384	Potato	plastid	72.98	71.2
GSMUA_Achr11P...	Banana	plastid	75.49	70.94
Solyc01g091580.2.1	Tomato	plastid	72.7	70.92
TraesCS1A01G075500.1	Wheat	golgi	19.78	17.71
TraesCS3A01G322800.1	Wheat	mitochondrion	23.4	17.36
TraesCS4A01G197700.1	Wheat	plastid	26.46	17.15
TraesCS1A01G327200.1	Wheat	cytosol	23.68	17.1
TraesCS4A01G197600.1	Wheat	plastid	26.18	17.0
TraesCS1A01G327300.1	Wheat	cytosol	22.28	16.23
TraesCS5A01G534900.1	Wheat	golgi	27.58	15.42
TraesCS6A01G101200.1	Wheat	endoplasmic reticulum	26.18	15.36

Protein Annotations

Gene3D:1.20.120.140	MapMan:23.1.7.4	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005525	GO:GO:0006614	GO:GO:0006810	GO:GO:0008150	HAMAP:MF_00920
InterPro:P-loop_NTPase	PFAM:PF00448	PFAM:PF02881	ScanProsite:PS00300	PANTHER:PTHR43134	PANTHER:PTHR43134:SF2
SMART:SM00382	SMART:SM00962	SMART:SM00963	InterPro:SRP/SRP_N	InterPro:SRP54_GTPase_dom	InterPro:SR_rcpt_FtsY
SUPFAM:SSF47364	SUPFAM:SSF52540	InterPro:Signal_recog_particl_SRP54_hlx	TIGRFAMs:TIGR00064	EnsemblPlantsGene:TraesCS3A01G498300	EnsemblPlants:TraesCS3A01G498300.1
TIGR:cd03115	:	:	:	:	:

Description

No Description!

Coordinates

chr3A:-:724057585..724060128

Molecular Weight (calculated)

38660.9 Da

IEP (calculated)

8.458

GRAVY (calculated)

-0.006

Length

359 amino acids

Sequence
(BLAST)

001: MASAPSRVLP FLSPPYTAAS ASLRAPSGRL RCAATAGQAG FFTRLGRLIK EKAKSDVDKL FSGFSKTRET LSVVDELLTY WNLADTDRVL DDLEEALLVS
101: DFGPKISFRI VDTLRDQIRD GKLKSGTEIK ASLKRCILEL LTTKGSKTEL QLGFRKPAVI MIVGVNGGGK TTSLGKLAYR FKNEGAKVLM AAGDTFRAAA
201: RDQLEIWAER TGSEIVIDND KKAQAPSVLS QAVKRGKREG FDVVLCDTSG RLHTNYGLME ELVSCKKVIA KALPGAPNEI LLVLDGTTGL NMLQQAKEFN
301: DVVGITGFIL TKLDGTARGG CVVSVVDELG IPVKFVGVGE GVEDLQPFDA EAFVEAIFP

Best Arabidopsis Sequence Match ( AT2G45770.1 )
(BLAST)

001: MATSSAHLSF LAGRISPFSS ERIGLFPLRG EFRPRMTRFR CSAGPSGFFT RLGRLIKEKA KSDVEKVFSG FSKTRENLAV IDELLLFWNL AETDRVLDEL
101: EEALLVSDFG PKITVRIVER LREDIMSGKL KSGSEIKDAL KESVLEMLAK KNSKTELQLG FRKPAVIMIV GVNGGGKTTS LGKLAHRLKN EGTKVLMAAG
201: DTFRAAASDQ LEIWAERTGC EIVVAEGDKA KAATVLSKAV KRGKEEGYDV VLCDTSGRLH TNYSLMEELI ACKKAVGKIV SGAPNEILLV LDGNTGLNML
301: PQAREFNEVV GITGLILTKL DGSARGGCVV SVVEELGIPV KFIGVGEAVE DLQPFDPEAF VNAIFS

Arabidopsis Description

CPFTSYCell division protein FtsY homolog, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O80842]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.