Factsheet for TraesCSU01G058200.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS3A01G075700.1
TraesCS3B01G089800.1
TraesCS3D01G075800.1
TraesCS4A01G197600.1
TraesCS4A01G197700.1
TraesCS4B01G117800.1
TraesCS4B01G117900.1
TraesCS4B01G326700.1
TraesCS4D01G115500.1
TraesCS4D01G115600.1
TraesCS4D01G323400.1
TraesCS5A01G498700.1
TraesCS6A01G251400.1
TraesCS6A01G274500.1
TraesCS6B01G273900.1
TraesCS6B01G302000.1
TraesCS6D01G233200.1
TraesCS6D01G254800.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G45770.1	TraesCS3A01G075700.1	AT2G28800.1	14517205
AT2G45770.1	TraesCS3B01G089800.1	AT2G28800.1	14517205
AT2G45770.1	TraesCS3D01G075800.1	AT2G28800.1	14517205
AT2G45770.1	TraesCS4B01G326700.1	AT2G47450.1	14517205
AT2G45770.1	TraesCS4D01G323400.1	AT2G47450.1	14517205
AT2G45770.1	TraesCS5A01G498700.1	AT2G47450.1	14517205
AT2G45770.1	TraesCS6A01G274500.1	AT3G27960.1	21798944
AT2G45770.1	TraesCS6B01G302000.1	AT3G27960.1	21798944
AT2G45770.1	TraesCS6D01G254800.1	AT3G27960.1	21798944
AT2G45770.1	TraesCS6A01G251400.1	AT3G48150.1	21798944
AT2G45770.1	TraesCS6B01G273900.1	AT3G48150.1	21798944
AT2G45770.1	TraesCS6D01G233200.1	AT3G48150.1	21798944
AT2G45770.1	TraesCS4A01G197600.1	AT5G03940.1	14517205
AT2G45770.1	TraesCS4A01G197700.1	AT5G03940.1	14517205
AT2G45770.1	TraesCS4B01G117800.1	AT5G03940.1	14517205
AT2G45770.1	TraesCS4B01G117900.1	AT5G03940.1	14517205
AT2G45770.1	TraesCS4D01G115500.1	AT5G03940.1	14517205
AT2G45770.1	TraesCS4D01G115600.1	AT5G03940.1	14517205

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G498300.1	Wheat	plastid	98.33	98.61
TraesCS3B01G561300.1	Wheat	plastid	96.11	96.92
EES04254	Sorghum	plastid	89.44	87.98
HORVU3Hr1G110160.4	Barley	mitochondrion	96.67	87.22
Os01t0958100-01	Rice	plastid	87.5	86.78
Zm00001d042044_P001	Maize	plastid	89.44	75.06
KRH65131	Soybean	plastid	76.94	74.46
CDY18901	Canola	plastid	74.17	73.96
KRH48224	Soybean	plastid	76.39	73.92
VIT_15s0048g02080.t01	Wine grape	plastid	75.0	73.57
CDY37064	Canola	plastid	75.0	73.37
CDX74765	Canola	plastid	74.72	73.1
Bra004937.1-P	Field mustard	plastid	74.44	72.83
CDY27360	Canola	plastid	74.17	72.75
AT2G45770.1	Thale cress	plastid	73.89	72.68
Bra039315.1-P	Field mustard	plastid	63.06	72.06
PGSC0003DMT400071384	Potato	plastid	73.61	72.01
Solyc01g091580.2.1	Tomato	plastid	73.33	71.74
GSMUA_Achr11P...	Banana	plastid	75.83	71.47

Protein Annotations

Gene3D:1.20.120.140	MapMan:23.1.7.4	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	GO:GO:0000166	GO:GO:0003674
GO:GO:0005488	GO:GO:0005525	GO:GO:0006614	GO:GO:0006810	GO:GO:0008150	HAMAP:MF_00920
InterPro:P-loop_NTPase	PFAM:PF00448	PFAM:PF02881	ScanProsite:PS00300	PANTHER:PTHR43134	PANTHER:PTHR43134:SF2
SMART:SM00382	SMART:SM00962	SMART:SM00963	InterPro:SRP/SRP_N	InterPro:SRP54_GTPase_dom	InterPro:SR_rcpt_FtsY
SUPFAM:SSF47364	SUPFAM:SSF52540	InterPro:Signal_recog_particl_SRP54_hlx	TIGRFAMs:TIGR00064	EnsemblPlantsGene:TraesCSU01G058200	EnsemblPlants:TraesCSU01G058200.1
TIGR:cd03115	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrUn:-:45753841..45756439

Molecular Weight (calculated)

38666.8 Da

IEP (calculated)

8.464

GRAVY (calculated)

-0.018

Length

360 amino acids

Sequence
(BLAST)

001: MASAPSRALP FLSPPSTAPA SASLRAPSSR LRCAAAAGQA GFFTRLGRLI KEKAKSDVDK LFSGFSKTRE NLSVVDELLT YWNLADTDRV LDDLEEALLV
101: SDFGPKISFR IVDTLRDQIR DGKLKSGTEI KASLKRCILE LLTTKGSKTE LQLGFRKPAV IMIVGVNGGG KTTSLGKLAY RFKNEGAKVL MAAGDTFRAA
201: ARDQLEIWAE RTGSEIVIDN DKKAQAPSVL SQAVKRGKRE GFDVVLCDTS GRLHTNYGLM EELVSCKKVI AKALPGAPNE ILLVLDGTTG LNMLQQAKEF
301: NDVVGITGFI LTKLDGTARG GCVVSVVDEL GIPVKFVGVG EGVEDLQPFD AEAFVEAIFP

Best Arabidopsis Sequence Match ( AT2G45770.1 )
(BLAST)

001: MATSSAHLSF LAGRISPFSS ERIGLFPLRG EFRPRMTRFR CSAGPSGFFT RLGRLIKEKA KSDVEKVFSG FSKTRENLAV IDELLLFWNL AETDRVLDEL
101: EEALLVSDFG PKITVRIVER LREDIMSGKL KSGSEIKDAL KESVLEMLAK KNSKTELQLG FRKPAVIMIV GVNGGGKTTS LGKLAHRLKN EGTKVLMAAG
201: DTFRAAASDQ LEIWAERTGC EIVVAEGDKA KAATVLSKAV KRGKEEGYDV VLCDTSGRLH TNYSLMEELI ACKKAVGKIV SGAPNEILLV LDGNTGLNML
301: PQAREFNEVV GITGLILTKL DGSARGGCVV SVVEELGIPV KFIGVGEAVE DLQPFDPEAF VNAIFS

Arabidopsis Description

CPFTSYCell division protein FtsY homolog, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O80842]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.