Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 5
- nucleus 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G323400.1 | Wheat | plastid | 97.95 | 97.7 |
| TraesCS4B01G326700.1 | Wheat | plastid | 96.68 | 96.18 |
| Os03t0131900-01 | Rice | plastid | 80.82 | 81.44 |
| OQU93303 | Sorghum | mitochondrion, plastid | 76.21 | 78.22 |
| Zm00001d027518_P001 | Maize | plastid | 73.66 | 75.39 |
| AT2G47450.1 | Thale cress | plastid | 47.83 | 50.13 |
| Solyc02g087400.1.1 | Tomato | cytosol, mitochondrion | 46.8 | 49.73 |
| PGSC0003DMT400003274 | Potato | plastid | 46.29 | 48.66 |
| KRH29099 | Soybean | plastid | 47.31 | 48.43 |
| CDX77337 | Canola | plastid | 47.06 | 48.42 |
| Bra014106.1-P | Field mustard | plastid | 46.8 | 48.16 |
| CDY70592 | Canola | plastid | 46.8 | 48.16 |
| VIT_03s0038g03560.t01 | Wine grape | plastid | 45.78 | 47.99 |
| KRG92072 | Soybean | cytosol | 13.04 | 46.79 |
Protein Annotations
| Gene3D:1.25.40.20 | Gene3D:2.40.50.40 | MapMan:23.1.7.3.1 | InterPro:Ankyrin_rpt | InterPro:Ankyrin_rpt-contain_dom | InterPro:Ankyrin_rpt-contain_sf |
| InterPro:CPSRP43 | InterPro:Chromo-like_dom_sf | InterPro:Chromo/chromo_shadow_dom | InterPro:Chromo_domain | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0009416 | GO:GO:0009507 | GO:GO:0009536 | GO:GO:0009628 |
| GO:GO:0045038 | GO:GO:0080085 | InterPro:IPR000953 | InterPro:IPR002110 | InterPro:IPR020683 | InterPro:IPR036770 |
| PFAM:PF00385 | PFAM:PF12796 | PFscan:PS50013 | PFscan:PS50088 | PFscan:PS50297 | PANTHER:PTHR24128 |
| PANTHER:PTHR24128:SF11 | SMART:SM00248 | SMART:SM00298 | SUPFAM:SSF48403 | SUPFAM:SSF54160 | EnsemblPlantsGene:TraesCS5A01G498700 |
| EnsemblPlants:TraesCS5A01G498700.1 | TIGR:cd00024 | TIGR:cd00204 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr5A:-:665766260..665767599
Molecular Weight (calculated)
42333.0 Da
IEP (calculated)
4.380
GRAVY (calculated)
-0.514
Length
391 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAVLRHPSL SRLKAPNPAA HRTQYLSITV PRRPRVPKRR LAAAALFQDQ TNPRTAATSK GGDEEDEEGY GEVDRIVSSR TVKNAVFAED GSATTVTATE
101: YLVEWKDGHE PTWIPSEAIA ADVVAEYETP WWDAAKKADV DALGALLADE ALRRDPNAED AQGRTAMHFA AGLGSEECLR LLAEAGADVG HAERAGGGLT
201: PLHIAAGYGR ATGVRALLEL GADAEGPDGK GRTPLELVQE VLAATPKGVP AAFERRQALE AAAKELEKAV YEWGEVEKVV DGRGEGKWRE YLVEWRDGGD
301: REWVKAPWVA EDLVKDFEAG LEYGVAEAVV DRRQAADGDG DGKWEYLVKW VDIEEATWEP AENVDAELVQ EFERQQSGNG GAAPPAETFA G
101: YLVEWKDGHE PTWIPSEAIA ADVVAEYETP WWDAAKKADV DALGALLADE ALRRDPNAED AQGRTAMHFA AGLGSEECLR LLAEAGADVG HAERAGGGLT
201: PLHIAAGYGR ATGVRALLEL GADAEGPDGK GRTPLELVQE VLAATPKGVP AAFERRQALE AAAKELEKAV YEWGEVEKVV DGRGEGKWRE YLVEWRDGGD
301: REWVKAPWVA EDLVKDFEAG LEYGVAEAVV DRRQAADGDG DGKWEYLVKW VDIEEATWEP AENVDAELVQ EFERQQSGNG GAAPPAETFA G
001: MQKVFLAMDT CALVIHQSLS RIKLSPPKSS SSSSSAFSPE SLPIRRIELC FRGAICAAVQ RNYEETTSSV EEAEEDDESS SSYGEVNKII GSRTAGEGAM
101: EYLIEWKDGH SPSWVPSSYI AADVVSEYET PWWTAARKAD EQALSQLLED RDVDAVDENG RTALLFVAGL GSDKCVRLLA EAGADLDHRD MRGGLTALHM
201: AAGYVRPEVV EALVELGADI EVEDERGLTA LELAREILKT TPKGNPMQFG RRIGLEKVIN VLEGQVFEYA EVDEIVEKRG KGKDVEYLVR WKDGGDCEWV
301: KGVHVAEDVA KDYEDGLEYA VAESVIGKRV GDDGKTIEYL VKWTDMSDAT WEPQDNVDST LVLLYQQQQP MNE
101: EYLIEWKDGH SPSWVPSSYI AADVVSEYET PWWTAARKAD EQALSQLLED RDVDAVDENG RTALLFVAGL GSDKCVRLLA EAGADLDHRD MRGGLTALHM
201: AAGYVRPEVV EALVELGADI EVEDERGLTA LELAREILKT TPKGNPMQFG RRIGLEKVIN VLEGQVFEYA EVDEIVEKRG KGKDVEYLVR WKDGGDCEWV
301: KGVHVAEDVA KDYEDGLEYA VAESVIGKRV GDDGKTIEYL VKWTDMSDAT WEPQDNVDST LVLLYQQQQP MNE
Arabidopsis Description
CAOSignal recognition particle 43 kDa protein, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:O22265]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.