Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- nucleus 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G332100.1 | Wheat | nucleus | 97.09 | 97.17 |
| TraesCS2B01G351400.1 | Wheat | nucleus | 94.34 | 94.57 |
| Os04t0471400-01 | Rice | nucleus | 57.52 | 57.38 |
| OQU81762 | Sorghum | nucleus | 55.74 | 55.74 |
| Zm00001d025668_P005 | Maize | nucleus | 54.13 | 54.0 |
| Zm00001d003333_P005 | Maize | nucleus | 53.96 | 53.83 |
| GSMUA_Achr9P12690_001 | Banana | nucleus | 28.56 | 27.93 |
| GSMUA_Achr10P... | Banana | nucleus | 24.43 | 27.53 |
| GSMUA_Achr4P01620_001 | Banana | nucleus | 28.07 | 27.39 |
| GSMUA_Achr5P04160_001 | Banana | nucleus | 20.31 | 26.99 |
| AT5G56250.1 | Thale cress | nucleus | 16.18 | 24.66 |
| Bra035611.1-P | Field mustard | nucleus, plastid | 14.4 | 24.42 |
| CDY06514 | Canola | nucleus, plastid | 13.59 | 24.38 |
| CDY36785 | Canola | nucleus | 11.41 | 24.31 |
| CDY20740 | Canola | plastid | 14.4 | 24.09 |
| GSMUA_Achr10P... | Banana | nucleus | 21.76 | 23.83 |
| GSMUA_Achr3P10940_001 | Banana | nucleus | 25.0 | 23.62 |
| Bra028941.1-P | Field mustard | nucleus, plastid | 14.32 | 23.51 |
| CDY36786 | Canola | nucleus, plastid | 14.32 | 23.51 |
| CDY11950 | Canola | nucleus | 14.0 | 22.76 |
| GSMUA_Achr7P20270_001 | Banana | nucleus | 23.95 | 22.49 |
| CDY06515 | Canola | nucleus, plastid | 16.42 | 22.46 |
| CDY62101 | Canola | nucleus | 12.38 | 22.37 |
| Bra035610.1-P | Field mustard | nucleus, plastid | 16.42 | 21.19 |
| CDY11951 | Canola | nucleus, plastid | 15.21 | 21.08 |
| CDY32803 | Canola | nucleus | 15.7 | 20.42 |
| CDY65749 | Canola | nucleus | 14.56 | 20.41 |
| Bra028942.1-P | Field mustard | nucleus | 15.53 | 20.02 |
| Bra002831.1-P | Field mustard | nucleus | 9.71 | 20.0 |
| CDY32802 | Canola | nucleus | 9.71 | 20.0 |
| CDY17406 | Canola | nucleus, plastid | 15.05 | 19.94 |
| Bra002832.1-P | Field mustard | nucleus | 15.61 | 19.92 |
| AT5G56240.3 | Thale cress | nucleus | 15.86 | 19.86 |
| VIT_19s0015g01810.t01 | Wine grape | nucleus | 21.04 | 18.69 |
| CDY36783 | Canola | cytosol | 1.7 | 17.65 |
| Solyc07g066200.2.1 | Tomato | nucleus | 18.53 | 17.09 |
| PGSC0003DMT400056953 | Potato | nucleus | 19.01 | 16.85 |
Protein Annotations
| EnsemblPlants:TraesCS2A01G330900.1 | EnsemblPlantsGene:TraesCS2A01G330900 | PANTHER:PTHR35767 | PANTHER:PTHR35767:SF1 | SEG:seg | MapMan:35.2 |
Description
No Description!
Coordinates
chr2A:+:563764907..563772461
Molecular Weight (calculated)
136357.0 Da
IEP (calculated)
8.062
GRAVY (calculated)
-0.752
Length
1236 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLSSDHPSGP SCSSQSVVRG VGADPATFHA ADSPELAHQD PADLVQPCPT FSIRDYVFDS RSKGIKRSWP FHPQSLELCL KRGVKDLLPP FEPPDLLRSR
0101: SFYTCVDSEQ SAACLEADAF VDLVKAREAG LTNVNTTGIN LQSCQSADES LGPSQYTPTE GGKTATDQGG NINELGHTSE AIQAYQEDNI CTKASSQTEV
0201: ARPYLKSLGS SRETSEKKGK LLVKSGSMTD IRQRKDLSYN SSSVSNPKAS NTCPVCKVFS SPSNTTLNAH IDQCLYAVSN AEPVVETVIV KPKVKQRKMQ
0301: LMVDIYKTAL PYTLDDLDRR NGTNWAIDLS VPSVNKVVCT KNRSPRVVPS EAKDSERDSD VYVDSNGIKI RILSKPIGAP LVLGNDGLKQ VEKHQTGKST
0401: LMKKTSLESK SFRNKKFKVH GKKCNRLNHL KSQVELYPDG DIHVDTSEEE PIMHTQKPTE SSSCGRSGTI RQWVCSKRSG ITNNLSRKSN NISSDSMKPG
0501: TKKLARSRMI GGFDDPQITE SYTEAFSSRS TEETATTLEV NENDDQERVS SRLFRSIPRW SSENPSSSSA FPKVPRSAAT LAKRKIKEIG RREASRSDKY
0601: DTVRNSTSTK CSEPCLSVSI RGLSNDDSKR TVSTSKVLRK HRSVSRTRKR DFSPSISGLV NDFGQEHELD HRHVNNTFSV TNNGTSDKVV KHTQEDTTDN
0701: DISYGTDMLA LGQGDHQHDV TQQTTSMHMD SEGEEHATQM QCTSVSRNTH EDCCSAISSG SLSLENSKTV PKGSSSMQDQ CSTKQSTHHT HVSNIVTNNE
0801: MEECQVDPAS TKESSTCLTN NREMGLATPR DNSSITSNRE DSNQDHVFLA FGRDSSDSPI SVASTMSSPV ALNGSRNEES GPGQSTVKVR TLEKSMSGSS
0901: NQETKSMPPA REGEQLAKEK LYCCSCRESI SREPHLDHES STARSDTFAR KQVPQLHMGL RTSSSFSTYQ RTDTNSNPYL DSHGQLLTGK VLTESSMSSL
1001: SYATDCIRPL LQTQLPSPPS PMLRLMGKNL MVMNSQESGR PQAPKPDYML GGNYMPPASF VPPDYQHSHS AFIDRTPSAR SHQIPLPSVQ AGNFVGPPMH
1101: GGFMVQSNHH SLQKPYRNPA PVMHHPTYMM KEVIMINDDP PECRSEPQVS MHPPTGTYPT SISVPNNFGP RPFYCHPPPM QILPRENFAG SMPVFPMFGA
1201: QRQQVRYSQS LHLTPSRVQP PQGYINPHVY YPQDLR
0101: SFYTCVDSEQ SAACLEADAF VDLVKAREAG LTNVNTTGIN LQSCQSADES LGPSQYTPTE GGKTATDQGG NINELGHTSE AIQAYQEDNI CTKASSQTEV
0201: ARPYLKSLGS SRETSEKKGK LLVKSGSMTD IRQRKDLSYN SSSVSNPKAS NTCPVCKVFS SPSNTTLNAH IDQCLYAVSN AEPVVETVIV KPKVKQRKMQ
0301: LMVDIYKTAL PYTLDDLDRR NGTNWAIDLS VPSVNKVVCT KNRSPRVVPS EAKDSERDSD VYVDSNGIKI RILSKPIGAP LVLGNDGLKQ VEKHQTGKST
0401: LMKKTSLESK SFRNKKFKVH GKKCNRLNHL KSQVELYPDG DIHVDTSEEE PIMHTQKPTE SSSCGRSGTI RQWVCSKRSG ITNNLSRKSN NISSDSMKPG
0501: TKKLARSRMI GGFDDPQITE SYTEAFSSRS TEETATTLEV NENDDQERVS SRLFRSIPRW SSENPSSSSA FPKVPRSAAT LAKRKIKEIG RREASRSDKY
0601: DTVRNSTSTK CSEPCLSVSI RGLSNDDSKR TVSTSKVLRK HRSVSRTRKR DFSPSISGLV NDFGQEHELD HRHVNNTFSV TNNGTSDKVV KHTQEDTTDN
0701: DISYGTDMLA LGQGDHQHDV TQQTTSMHMD SEGEEHATQM QCTSVSRNTH EDCCSAISSG SLSLENSKTV PKGSSSMQDQ CSTKQSTHHT HVSNIVTNNE
0801: MEECQVDPAS TKESSTCLTN NREMGLATPR DNSSITSNRE DSNQDHVFLA FGRDSSDSPI SVASTMSSPV ALNGSRNEES GPGQSTVKVR TLEKSMSGSS
0901: NQETKSMPPA REGEQLAKEK LYCCSCRESI SREPHLDHES STARSDTFAR KQVPQLHMGL RTSSSFSTYQ RTDTNSNPYL DSHGQLLTGK VLTESSMSSL
1001: SYATDCIRPL LQTQLPSPPS PMLRLMGKNL MVMNSQESGR PQAPKPDYML GGNYMPPASF VPPDYQHSHS AFIDRTPSAR SHQIPLPSVQ AGNFVGPPMH
1101: GGFMVQSNHH SLQKPYRNPA PVMHHPTYMM KEVIMINDDP PECRSEPQVS MHPPTGTYPT SISVPNNFGP RPFYCHPPPM QILPRENFAG SMPVFPMFGA
1201: QRQQVRYSQS LHLTPSRVQP PQGYINPHVY YPQDLR
001: MFLSSTDQRS PSNNNPSSSS SFLHLTNSCD ELGQSHLSTF SIRDYAFSYR TKNIKKSWPF SSTSLQLCLN HGLTDPLPPI QPPEVKKPNI THVEAVSHKR
101: KSEKLGSYQI LVETTKQGFE NGLLASGSKS KIQVAMVNKN PRKKCGLIVK PGACVDSGGK EDHSSLFSAS DSMALRTCPI CKTFSSASNT TLNAHIDQCL
201: SVDSGQQPIR KPNRPKTKPR LKVKTMTDIY ASAKEGTLED LDKRNGTKWA MISSYSNRVV SDDKPEVSNK VKKRSVSRAR IDEDAAGIGP VYIDAKGQKL
301: RILSKFNEKA SDPSRREHEE VCEKKSSSEG KGGKSFRKKL WGEKHYKHRK LVPQNRKLTV RKSNASEIPE YRRGYSKEGK DFERSETSGP GQGRIFNQRM
401: LTKRSLSRHG KKNGTDICES ENWNSLSEDP LVLRSPSHVS TDLSETVSSP LNSIGSWRVC GESQVSGKSW ALSRNRSIES DLFVANPLRC LTPVARGVMK
501: FKKARMDFSE NEDEDIGKWE SEMTQERELS DYDGWDDDDG ETDKVALSSN PSFSGEDNDY ESYEETGDNK GGDDMLDKTK DADVEFESMV YEKTGCETAE
601: QESSFMEVDP IPIPGPPGSF LPSPWDMMGT DAVEHHGNSS VITSQVHSSQ DQFDLTDRNS SESPVSAISN FAAPETQTLS LHNIITTDKR PSRFRDNDQS
701: CCCQRKEKAL EDTTFCQPPP PQMIQQDLDF LSKSVPAVPS TPNPVLRLMG KDLMVINQRE EPSHNESSPK PTSQFLDLSK TQQASPSVNL LHPPYSGNGY
801: FDTNTSFYNI P
101: KSEKLGSYQI LVETTKQGFE NGLLASGSKS KIQVAMVNKN PRKKCGLIVK PGACVDSGGK EDHSSLFSAS DSMALRTCPI CKTFSSASNT TLNAHIDQCL
201: SVDSGQQPIR KPNRPKTKPR LKVKTMTDIY ASAKEGTLED LDKRNGTKWA MISSYSNRVV SDDKPEVSNK VKKRSVSRAR IDEDAAGIGP VYIDAKGQKL
301: RILSKFNEKA SDPSRREHEE VCEKKSSSEG KGGKSFRKKL WGEKHYKHRK LVPQNRKLTV RKSNASEIPE YRRGYSKEGK DFERSETSGP GQGRIFNQRM
401: LTKRSLSRHG KKNGTDICES ENWNSLSEDP LVLRSPSHVS TDLSETVSSP LNSIGSWRVC GESQVSGKSW ALSRNRSIES DLFVANPLRC LTPVARGVMK
501: FKKARMDFSE NEDEDIGKWE SEMTQERELS DYDGWDDDDG ETDKVALSSN PSFSGEDNDY ESYEETGDNK GGDDMLDKTK DADVEFESMV YEKTGCETAE
601: QESSFMEVDP IPIPGPPGSF LPSPWDMMGT DAVEHHGNSS VITSQVHSSQ DQFDLTDRNS SESPVSAISN FAAPETQTLS LHNIITTDKR PSRFRDNDQS
701: CCCQRKEKAL EDTTFCQPPP PQMIQQDLDF LSKSVPAVPS TPNPVLRLMG KDLMVINQRE EPSHNESSPK PTSQFLDLSK TQQASPSVNL LHPPYSGNGY
801: FDTNTSFYNI P
Arabidopsis Description
HAP8Hapless 8 [Source:UniProtKB/TrEMBL;Acc:Q9FH14]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.