Subcellular Localization
min:
: max
Winner_takes_all: nucleus, plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 4
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY65749 | Canola | nucleus | 88.52 | 96.15 |
| Bra028942.1-P | Field mustard | nucleus | 57.41 | 57.35 |
| Bra002832.1-P | Field mustard | nucleus | 57.62 | 56.97 |
| AT5G56240.3 | Thale cress | nucleus | 58.66 | 56.94 |
| Bra035611.1-P | Field mustard | nucleus, plastid | 31.32 | 41.15 |
| Bra028941.1-P | Field mustard | nucleus, plastid | 29.33 | 37.32 |
| Bra002831.1-P | Field mustard | nucleus | 21.4 | 34.17 |
| VIT_19s0015g01810.t01 | Wine grape | nucleus | 27.14 | 18.69 |
| GSMUA_Achr5P04160_001 | Banana | nucleus | 17.95 | 18.49 |
| Solyc07g066200.2.1 | Tomato | nucleus | 25.47 | 18.21 |
| PGSC0003DMT400056953 | Potato | nucleus | 25.89 | 17.78 |
| OQU81762 | Sorghum | nucleus | 22.34 | 17.31 |
| Os04t0471400-01 | Rice | nucleus | 21.92 | 16.95 |
| Zm00001d025668_P005 | Maize | nucleus | 21.61 | 16.71 |
| Zm00001d003333_P005 | Maize | nucleus | 21.61 | 16.71 |
| TraesCS2B01G351400.1 | Wheat | nucleus | 21.19 | 16.46 |
| TraesCS2D01G332100.1 | Wheat | nucleus | 21.19 | 16.44 |
| TraesCS2A01G330900.1 | Wheat | nucleus | 21.19 | 16.42 |
| GSMUA_Achr9P12690_001 | Banana | nucleus | 21.09 | 15.98 |
| GSMUA_Achr10P... | Banana | nucleus | 18.79 | 15.94 |
| GSMUA_Achr10P... | Banana | nucleus | 18.16 | 15.86 |
| GSMUA_Achr4P01620_001 | Banana | nucleus | 19.52 | 14.76 |
| GSMUA_Achr3P10940_001 | Banana | nucleus | 19.31 | 14.14 |
| GSMUA_Achr7P20270_001 | Banana | nucleus | 17.43 | 12.69 |
Protein Annotations
Description
AT5G56240 (E=6e-103) | INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: HAP8 (HAPLESS 8) (TAIR:AT5G56250.2); Has 259 Blast hits to 240 proteins in 69 species: Archae - 0; Bacteria - 13; Metazoa - 67; Fungi - 34; Plants - 31; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).
Coordinates
chrA02:+:7319505..7322621
Molecular Weight (calculated)
105766.0 Da
IEP (calculated)
8.889
GRAVY (calculated)
-0.868
Length
958 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLSTENPPR DPLSSSSSPA NLLRLTTSPS HELGQSSFSI RDYAYSNRKN NIKNSWPFST KSLHLCSSHG VTDPLPPFQK LSRLSNKFET TPSVSQLHQT
101: IAEASKRVCN QSRIIEYGLF TSTSKSKVEI VVAAKSNNKS KKCGQGGGGG MVKTKGDSSG VLMKTASESV MASKTCPICK TFSSASNTTL NAHIDQCLSM
201: DSSVPPVSSK PNKPRVKSVD SAVPPVSSKP RKPRVNQCMS VDSVAPLVSS KPNKPRVEPQ VKVKTLVDIY TTAKRCTLED LDRRNGTQWA SVLSCTNRVA
301: ADKSEVSKKR KASPVGVGPV YIDAKGQKLR ILTEFSQKKT LSREQQEDGS SEKKSSSQGS KENKKRGRRK KHGKCIKLTS HKANTAEKVL EYQREGSSKG
401: PRRIYNQRML AKRGLVSKKL NEKGHKLSAL RYQPSDDDDE DDSWSGEDRL VLRGADTSAT GSSPLNKQKL RSQVSGRSKT MLESKRAHSR SSRAQIEEKS
501: LTGAYSNNTV HSKKSLTSIQ EDKHPPGKNV RDASPRATSM RNLSPPFVAN GWRRLSPLVE ELKKSRFDLS DEEEEEETGK WESEMTQERG LSDDDDYVSG
601: DDNPSFSRYY DYDDDDDDEE SSDEEEEDDS NSRANVLDKS NDANVIIPSE RAMYYSEDMI YGQTGCDEED VRFGSEVRGK GSLFVEVDTI PIPGPPGSFL
701: PSPRGMGFDG NSSVITSQFQ SSMDQLDRNS SESPVSAVSN FASGRLNFQA ELPSSLDIPM SFGAPSHHGT IPEAEPMSFD KATTPLSFRN NDHESCCCQR
801: KERVSLNHEA SHLLQRRAAS SSSIAMSLTK SPTRLDPNHP FEQSQCVINR ANLNGAVVPP SPSNSVLRLM GKDLMVMNQG EADSNEEASR TSLKPTPQFH
901: DPQPCAGTGL YFNTGFYLRN SFEPKYEQQT PKAQQQTQAH QASAFRNNFD HLRYFPPS
101: IAEASKRVCN QSRIIEYGLF TSTSKSKVEI VVAAKSNNKS KKCGQGGGGG MVKTKGDSSG VLMKTASESV MASKTCPICK TFSSASNTTL NAHIDQCLSM
201: DSSVPPVSSK PNKPRVKSVD SAVPPVSSKP RKPRVNQCMS VDSVAPLVSS KPNKPRVEPQ VKVKTLVDIY TTAKRCTLED LDRRNGTQWA SVLSCTNRVA
301: ADKSEVSKKR KASPVGVGPV YIDAKGQKLR ILTEFSQKKT LSREQQEDGS SEKKSSSQGS KENKKRGRRK KHGKCIKLTS HKANTAEKVL EYQREGSSKG
401: PRRIYNQRML AKRGLVSKKL NEKGHKLSAL RYQPSDDDDE DDSWSGEDRL VLRGADTSAT GSSPLNKQKL RSQVSGRSKT MLESKRAHSR SSRAQIEEKS
501: LTGAYSNNTV HSKKSLTSIQ EDKHPPGKNV RDASPRATSM RNLSPPFVAN GWRRLSPLVE ELKKSRFDLS DEEEEEETGK WESEMTQERG LSDDDDYVSG
601: DDNPSFSRYY DYDDDDDDEE SSDEEEEDDS NSRANVLDKS NDANVIIPSE RAMYYSEDMI YGQTGCDEED VRFGSEVRGK GSLFVEVDTI PIPGPPGSFL
701: PSPRGMGFDG NSSVITSQFQ SSMDQLDRNS SESPVSAVSN FASGRLNFQA ELPSSLDIPM SFGAPSHHGT IPEAEPMSFD KATTPLSFRN NDHESCCCQR
801: KERVSLNHEA SHLLQRRAAS SSSIAMSLTK SPTRLDPNHP FEQSQCVINR ANLNGAVVPP SPSNSVLRLM GKDLMVMNQG EADSNEEASR TSLKPTPQFH
901: DPQPCAGTGL YFNTGFYLRN SFEPKYEQQT PKAQQQTQAH QASAFRNNFD HLRYFPPS
001: MFLSTENPPN DPLSSSSSPF LQHLTSSSHE LGQSHLSNFS IRDYAYSNRK NNIKNNWPFS SKSLQLFSTH GVTNPLPPFQ KFSTVSSKFE TTASPSSGKQ
101: IVSSYVHQGR DLDLAKLGLN QTVAETSSKG VCSQSRIIEN GLFPSTSVSK SEVEILVATT SNKKDNHSRK CGRGMVKSKE DSCAGLVTTS ESIMASKTCP
201: ICKTFSSASN TTLNAHIDQC LSVDSALLPP VVFSKPNKPR SKPPRVKVKT MVDIYASAKQ GTLEDLDRRN GTKWVSILSY SNRVVADKSE VSKKRKVSPV
301: GVGPVYIDAK GQKLRILSGF SEKKSSTTPL REQHEDGSSD KKCLGQGSKG TNKSLRKIRR GKKPHKFVKL TNHKADGPEQ IRGVQRGFSG EGSHMGHHRR
401: IYNQRMLAKR GLVSKKLNEK GHELSEDDED TWSGGDPTVL RGTDLSATDS YPLKKQKLGS EVAGRKKTLF RSQSAQSRSF RVPQSEKEDE SLEGVNINRL
501: KKSVASFQED KYPPGKKFCS DASPRGTSMR KFSPPFVPNA WRRLSMPVEL KKARLDFSEE KDDEETGKWE SEMTHERELR DDDYVSGDDG ENNEVLLRSN
601: PSSSGYDDYN DDDEESSEEE GDNNKRAHVL DQTDYTGAEF YQSESDSPTS IEILPSERAM YYSEAGNMIY GQTSCKEDER FDSEVGQGSL FVEVDTIPIP
701: GPPGSFLPSP RDMGFDENLG NSSVITSQVQ SSMDQLDRNS SESPVSAVSN FAAGRLNFPA ELSSFRENFS PDIAMSYSTT PMSFCVPSHH GTITEAEPIT
801: IDKTISPSRF RNNDQESCCC QRKERISEGI TLNHQGSHLL QRRAASSSNT MNLTNSPTRL DPNHPFEQSP YKTQQALDLQ MSKFSSRKSL NAVVPPSPSN
901: PVLRLMGKDL MVMNQGEADE EASRSSLTPN PQFVDPPCGG TGLYFNTGLY LRNSFDSTHQ PQVQAQQQSQ AAAFRNNFDH VRYFSPS
101: IVSSYVHQGR DLDLAKLGLN QTVAETSSKG VCSQSRIIEN GLFPSTSVSK SEVEILVATT SNKKDNHSRK CGRGMVKSKE DSCAGLVTTS ESIMASKTCP
201: ICKTFSSASN TTLNAHIDQC LSVDSALLPP VVFSKPNKPR SKPPRVKVKT MVDIYASAKQ GTLEDLDRRN GTKWVSILSY SNRVVADKSE VSKKRKVSPV
301: GVGPVYIDAK GQKLRILSGF SEKKSSTTPL REQHEDGSSD KKCLGQGSKG TNKSLRKIRR GKKPHKFVKL TNHKADGPEQ IRGVQRGFSG EGSHMGHHRR
401: IYNQRMLAKR GLVSKKLNEK GHELSEDDED TWSGGDPTVL RGTDLSATDS YPLKKQKLGS EVAGRKKTLF RSQSAQSRSF RVPQSEKEDE SLEGVNINRL
501: KKSVASFQED KYPPGKKFCS DASPRGTSMR KFSPPFVPNA WRRLSMPVEL KKARLDFSEE KDDEETGKWE SEMTHERELR DDDYVSGDDG ENNEVLLRSN
601: PSSSGYDDYN DDDEESSEEE GDNNKRAHVL DQTDYTGAEF YQSESDSPTS IEILPSERAM YYSEAGNMIY GQTSCKEDER FDSEVGQGSL FVEVDTIPIP
701: GPPGSFLPSP RDMGFDENLG NSSVITSQVQ SSMDQLDRNS SESPVSAVSN FAAGRLNFPA ELSSFRENFS PDIAMSYSTT PMSFCVPSHH GTITEAEPIT
801: IDKTISPSRF RNNDQESCCC QRKERISEGI TLNHQGSHLL QRRAASSSNT MNLTNSPTRL DPNHPFEQSP YKTQQALDLQ MSKFSSRKSL NAVVPPSPSN
901: PVLRLMGKDL MVMNQGEADE EASRSSLTPN PQFVDPPCGG TGLYFNTGLY LRNSFDSTHQ PQVQAQQQSQ AAAFRNNFDH VRYFSPS
Arabidopsis Description
BEST Arabidopsis thaliana protein match is: hapless 8 (TAIR:AT5G56250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: /.../BLink). [Source:TAIR;Acc:AT5G56240]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.