Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- nucleus 2
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d028055_P001 | |
| Zm00001d030843_P001 | |
| Zm00001d048134_P001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G56250.1 | Zm00001d028055_P001 | AT1G49850.1 | 21798944 |
| AT5G56250.1 | Zm00001d030843_P001 | AT1G49850.1 | 21798944 |
| AT5G56250.1 | Zm00001d048134_P001 | AT1G49850.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU81762 | Sorghum | nucleus | 89.18 | 89.4 |
| Zm00001d025668_P005 | Maize | nucleus | 86.76 | 86.76 |
| Os04t0471400-01 | Rice | nucleus | 62.87 | 62.87 |
| TraesCS2A01G330900.1 | Wheat | nucleus | 53.83 | 53.96 |
| TraesCS2D01G332100.1 | Wheat | nucleus | 53.67 | 53.85 |
| TraesCS2B01G351400.1 | Wheat | nucleus | 53.35 | 53.61 |
| GSMUA_Achr9P12690_001 | Banana | nucleus | 30.27 | 29.67 |
| GSMUA_Achr4P01620_001 | Banana | nucleus | 30.27 | 29.6 |
| GSMUA_Achr10P... | Banana | nucleus | 25.42 | 28.71 |
| GSMUA_Achr5P04160_001 | Banana | nucleus | 21.07 | 28.06 |
| CDY36785 | Canola | nucleus | 12.19 | 26.03 |
| AT5G56250.1 | Thale cress | nucleus | 17.03 | 26.02 |
| CDY20740 | Canola | plastid | 15.5 | 25.98 |
| Bra035611.1-P | Field mustard | nucleus, plastid | 15.09 | 25.65 |
| GSMUA_Achr3P10940_001 | Banana | nucleus | 26.63 | 25.23 |
| GSMUA_Achr10P... | Banana | nucleus | 22.52 | 24.71 |
| CDY62101 | Canola | nucleus | 13.64 | 24.71 |
| Bra028941.1-P | Field mustard | nucleus, plastid | 15.01 | 24.7 |
| CDY36786 | Canola | nucleus, plastid | 15.01 | 24.7 |
| CDY06514 | Canola | nucleus, plastid | 13.64 | 24.53 |
| GSMUA_Achr7P20270_001 | Banana | nucleus | 25.83 | 24.32 |
| CDY11950 | Canola | nucleus | 14.85 | 24.21 |
| CDY06515 | Canola | nucleus, plastid | 16.79 | 23.01 |
| AT5G56240.3 | Thale cress | nucleus | 17.27 | 21.68 |
| CDY32802 | Canola | nucleus | 10.49 | 21.67 |
| Bra002831.1-P | Field mustard | nucleus | 10.49 | 21.67 |
| CDY11951 | Canola | nucleus, plastid | 15.58 | 21.64 |
| Bra035610.1-P | Field mustard | nucleus, plastid | 16.71 | 21.61 |
| CDY32803 | Canola | nucleus | 16.55 | 21.58 |
| Bra002832.1-P | Field mustard | nucleus | 16.87 | 21.57 |
| CDY17406 | Canola | nucleus, plastid | 16.22 | 21.54 |
| CDY36783 | Canola | cytosol | 2.02 | 21.01 |
| CDY65749 | Canola | nucleus | 14.93 | 20.98 |
| Bra028942.1-P | Field mustard | nucleus | 15.9 | 20.54 |
| Solyc07g066200.2.1 | Tomato | nucleus | 20.5 | 18.96 |
| PGSC0003DMT400056953 | Potato | nucleus | 21.15 | 18.78 |
| VIT_19s0015g01810.t01 | Wine grape | nucleus | 20.9 | 18.62 |
Protein Annotations
| EnsemblPlants:Zm00001d003333_P005 | EnsemblPlants:Zm00001d003333_T005 | EnsemblPlantsGene:Zm00001d003333 | EntrezGene:103646329 | PANTHER:PTHR35767 | PANTHER:PTHR35767:SF1 |
| ProteinID:ONM16779.1 | SEG:seg | UniParc:UPI000842C33A | UniProt:A0A1D6E8P3 | MapMan:35.2 | : |
Description
hapless 8
Coordinates
chr2:+:40554878..40561505
Molecular Weight (calculated)
135385.0 Da
IEP (calculated)
6.511
GRAVY (calculated)
-0.716
Length
1239 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLSSEHPSGP SCSSKSGGPG VSADPATSAA EQPACQDPRD LIQSYPKFSI SRDYVFASRS KGIKRSWPFH PHSLQLCLEH GVKDPLPPFE PPDLIRSQPL
0101: NISTDIKQSA ACSEPIISVG LVKTKDAGSS NEYTGDINFQ SCQPVDESPG PSPYTSPEDG KSGIDQVGST NESDHTDEAI PIDLQDNSCT RASRRTEVAV
0201: PLRRLRNLDS SCEPSEKKCK FVVKLGASAD IRRPEDIASN SSSVSDPMAS KTCPVCKVFA STSNTTLNAH IDQCLSVESN TELVETVLVK PKVKPRKKRL
0301: MVDIYKTALP YTLEDLDRRN CTNWAVELAM SPVSKEVCTE NGSPEVVSFD RRDDEREGDV YVDSNGIKIR ILSKCNDVPL VLKDDLGSSK VAKHGTGKGI
0401: LMSKKMLKSK LLKNKKLKMH GKKYNKTSHL NSQVQADPHD DINEETSEEE RNAWNPSEST SNCGSRTMQQ WVCSKRSDIN KKLSKNHSGK TFDKVAPGAQ
0501: KSDRSSMFGF NDSQVPESPV GVFSSESLYM ATTSEATGVE QSNGPSKVLR SIPTWSSKTH LQSSVIPKVP RSAAALAKRK IKEIGRREAT KLDNYDVVRN
0601: PTSVKRFEAR TLSFSTAGPS NGPNRSASTS KKIRKHRSPL RTGKRAFSPS STRLVHGFGD EHEPETRHVN KKFRITSNEA PKKFLKHTEE DTADNDFSFA
0701: SDMPVSGQQN DQYDVAQETE GTQMDCEGED AETDVPYDSV SRSDPAECCN QISDVSLSPE NYRTADDDVL VEGCSVAVED PNSSEQLAHG HESNSAANNE
0801: MDEWQMDPTS TKESSPCLTS NRDMGPGGHQ DNSSITSNGE EDFNEEHGLP LGRGSLDSPI STASTMALPA ALKDSRTNEE EPGPSTGRTV EEQTTGCLNQ
0901: ETNSIPMARE GELPSEKPFR CSCQENIARE SRQSPVARPM LNSTGKQVPQ LHIGSRASSS FSTYQRTSAK PNPCFDPHDH LLAAKVPAES AISFPYSTDC
1001: ISPSFQTQLP SPSNPVLRLM GKDLMVMNSE ESVHPQAPSS DYILRGNYPA PVGFMPPNYQ HLSNSAFINM PPTTASHQIP LPSVQASGFV APPLRGGSVM
1101: QSDHHSQQKP YRNIMPAMHR PTYMMKEVIV INDSPERRSE PQGSMLFPPA PPPPLPVVPN NMPPRPFYCF PPQSPVLPRE RGAVGSMLVY ANVGSMVGVN
1201: SSSQGSQTEV ASPYMPNPFF VQSRAGYMNP PVYYSQNLG
0101: NISTDIKQSA ACSEPIISVG LVKTKDAGSS NEYTGDINFQ SCQPVDESPG PSPYTSPEDG KSGIDQVGST NESDHTDEAI PIDLQDNSCT RASRRTEVAV
0201: PLRRLRNLDS SCEPSEKKCK FVVKLGASAD IRRPEDIASN SSSVSDPMAS KTCPVCKVFA STSNTTLNAH IDQCLSVESN TELVETVLVK PKVKPRKKRL
0301: MVDIYKTALP YTLEDLDRRN CTNWAVELAM SPVSKEVCTE NGSPEVVSFD RRDDEREGDV YVDSNGIKIR ILSKCNDVPL VLKDDLGSSK VAKHGTGKGI
0401: LMSKKMLKSK LLKNKKLKMH GKKYNKTSHL NSQVQADPHD DINEETSEEE RNAWNPSEST SNCGSRTMQQ WVCSKRSDIN KKLSKNHSGK TFDKVAPGAQ
0501: KSDRSSMFGF NDSQVPESPV GVFSSESLYM ATTSEATGVE QSNGPSKVLR SIPTWSSKTH LQSSVIPKVP RSAAALAKRK IKEIGRREAT KLDNYDVVRN
0601: PTSVKRFEAR TLSFSTAGPS NGPNRSASTS KKIRKHRSPL RTGKRAFSPS STRLVHGFGD EHEPETRHVN KKFRITSNEA PKKFLKHTEE DTADNDFSFA
0701: SDMPVSGQQN DQYDVAQETE GTQMDCEGED AETDVPYDSV SRSDPAECCN QISDVSLSPE NYRTADDDVL VEGCSVAVED PNSSEQLAHG HESNSAANNE
0801: MDEWQMDPTS TKESSPCLTS NRDMGPGGHQ DNSSITSNGE EDFNEEHGLP LGRGSLDSPI STASTMALPA ALKDSRTNEE EPGPSTGRTV EEQTTGCLNQ
0901: ETNSIPMARE GELPSEKPFR CSCQENIARE SRQSPVARPM LNSTGKQVPQ LHIGSRASSS FSTYQRTSAK PNPCFDPHDH LLAAKVPAES AISFPYSTDC
1001: ISPSFQTQLP SPSNPVLRLM GKDLMVMNSE ESVHPQAPSS DYILRGNYPA PVGFMPPNYQ HLSNSAFINM PPTTASHQIP LPSVQASGFV APPLRGGSVM
1101: QSDHHSQQKP YRNIMPAMHR PTYMMKEVIV INDSPERRSE PQGSMLFPPA PPPPLPVVPN NMPPRPFYCF PPQSPVLPRE RGAVGSMLVY ANVGSMVGVN
1201: SSSQGSQTEV ASPYMPNPFF VQSRAGYMNP PVYYSQNLG
001: MFLSTENPPN DPLSSSSSPF LQHLTSSSHE LGQSHLSNFS IRDYAYSNRK NNIKNNWPFS SKSLQLFSTH GVTNPLPPFQ KFSTVSSKFE TTASPSSGKQ
101: IVSSYVHQGR DLDLAKLGLN QTVAETSSKG VCSQSRIIEN GLFPSTSVSK SEVEILVATT SNKKDNHSRK CGRGMVKSKE DSCAGLVTTS ESIMASKTCP
201: ICKTFSSASN TTLNAHIDQC LSVDSALLPP VVFSKPNKPR SKPPRVKVKT MVDIYASAKQ GTLEDLDRRN GTKWVSILSY SNRVVADKSE VSKKRKVSPV
301: GVGPVYIDAK GQKLRILSGF SEKKSSTTPL REQHEDGSSD KKCLGQGSKG TNKSLRKIRR GKKPHKFVKL TNHKADGPEQ IRGVQRGFSG EGSHMGHHRR
401: IYNQRMLAKR GLVSKKLNEK GHELSEDDED TWSGGDPTVL RGTDLSATDS YPLKKQKLGS EVAGRKKTLF RSQSAQSRSF RVPQSEKEDE SLEGVNINRL
501: KKSVASFQED KYPPGKKFCS DASPRGTSMR KFSPPFVPNA WRRLSMPVEL KKARLDFSEE KDDEETGKWE SEMTHERELR DDDYVSGDDG ENNEVLLRSN
601: PSSSGYDDYN DDDEESSEEE GDNNKRAHVL DQTDYTGAEF YQSESDSPTS IEILPSERAM YYSEAGNMIY GQTSCKEDER FDSEVGQGSL FVEVDTIPIP
701: GPPGSFLPSP RDMGFDENLG NSSVITSQVQ SSMDQLDRNS SESPVSAVSN FAAGRLNFPA ELSSFRENFS PDIAMSYSTT PMSFCVPSHH GTITEAEPIT
801: IDKTISPSRF RNNDQESCCC QRKERISEGI TLNHQGSHLL QRRAASSSNT MNLTNSPTRL DPNHPFEQSP YKTQQALDLQ MSKFSSRKSL NAVVPPSPSN
901: PVLRLMGKDL MVMNQGEADE EASRSSLTPN PQFVDPPCGG TGLYFNTGLY LRNSFDSTHQ PQVQAQQQSQ AAAFRNNFDH VRYFSPS
101: IVSSYVHQGR DLDLAKLGLN QTVAETSSKG VCSQSRIIEN GLFPSTSVSK SEVEILVATT SNKKDNHSRK CGRGMVKSKE DSCAGLVTTS ESIMASKTCP
201: ICKTFSSASN TTLNAHIDQC LSVDSALLPP VVFSKPNKPR SKPPRVKVKT MVDIYASAKQ GTLEDLDRRN GTKWVSILSY SNRVVADKSE VSKKRKVSPV
301: GVGPVYIDAK GQKLRILSGF SEKKSSTTPL REQHEDGSSD KKCLGQGSKG TNKSLRKIRR GKKPHKFVKL TNHKADGPEQ IRGVQRGFSG EGSHMGHHRR
401: IYNQRMLAKR GLVSKKLNEK GHELSEDDED TWSGGDPTVL RGTDLSATDS YPLKKQKLGS EVAGRKKTLF RSQSAQSRSF RVPQSEKEDE SLEGVNINRL
501: KKSVASFQED KYPPGKKFCS DASPRGTSMR KFSPPFVPNA WRRLSMPVEL KKARLDFSEE KDDEETGKWE SEMTHERELR DDDYVSGDDG ENNEVLLRSN
601: PSSSGYDDYN DDDEESSEEE GDNNKRAHVL DQTDYTGAEF YQSESDSPTS IEILPSERAM YYSEAGNMIY GQTSCKEDER FDSEVGQGSL FVEVDTIPIP
701: GPPGSFLPSP RDMGFDENLG NSSVITSQVQ SSMDQLDRNS SESPVSAVSN FAAGRLNFPA ELSSFRENFS PDIAMSYSTT PMSFCVPSHH GTITEAEPIT
801: IDKTISPSRF RNNDQESCCC QRKERISEGI TLNHQGSHLL QRRAASSSNT MNLTNSPTRL DPNHPFEQSP YKTQQALDLQ MSKFSSRKSL NAVVPPSPSN
901: PVLRLMGKDL MVMNQGEADE EASRSSLTPN PQFVDPPCGG TGLYFNTGLY LRNSFDSTHQ PQVQAQQQSQ AAAFRNNFDH VRYFSPS
Arabidopsis Description
BEST Arabidopsis thaliana protein match is: hapless 8 (TAIR:AT5G56250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: /.../BLink). [Source:TAIR;Acc:AT5G56240]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.