Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 1
- nucleus 2
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G56250.1 | CDY16531 | AT1G49850.1 | 21798944 |
| AT5G56250.1 | CDY20854 | AT1G49850.1 | 21798944 |
| AT5G56250.1 | CDY32837 | AT1G49850.1 | 21798944 |
| AT5G56250.1 | CDY61552 | AT1G49850.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra035611.1-P | Field mustard | nucleus, plastid | 94.18 | 95.47 |
| CDY06514 | Canola | nucleus, plastid | 74.29 | 79.68 |
| AT5G56250.1 | Thale cress | nucleus | 67.79 | 61.78 |
| CDY36786 | Canola | nucleus, plastid | 58.05 | 56.97 |
| CDY62101 | Canola | nucleus | 52.23 | 56.43 |
| CDY11950 | Canola | nucleus | 56.97 | 55.39 |
| CDY32802 | Canola | nucleus | 43.03 | 53.0 |
| CDY36785 | Canola | nucleus | 28.28 | 36.03 |
| CDY06515 | Canola | nucleus, plastid | 42.22 | 34.51 |
| CDY11951 | Canola | nucleus, plastid | 40.87 | 33.86 |
| CDY32803 | Canola | nucleus | 41.41 | 32.21 |
| CDY65749 | Canola | nucleus | 38.43 | 32.2 |
| CDY17406 | Canola | nucleus, plastid | 40.19 | 31.83 |
| CDY36783 | Canola | cytosol | 3.92 | 24.37 |
| GSMUA_Achr5P04160_001 | Banana | nucleus | 21.24 | 16.88 |
| VIT_19s0015g01810.t01 | Wine grape | nucleus | 30.18 | 16.03 |
| GSMUA_Achr10P... | Banana | nucleus | 23.27 | 15.68 |
| Solyc07g066200.2.1 | Tomato | nucleus | 28.42 | 15.67 |
| OQU81762 | Sorghum | nucleus | 25.98 | 15.53 |
| Zm00001d003333_P005 | Maize | nucleus | 25.98 | 15.5 |
| Zm00001d025668_P005 | Maize | nucleus | 25.71 | 15.33 |
| Os04t0471400-01 | Rice | nucleus | 25.3 | 15.09 |
| PGSC0003DMT400056953 | Potato | nucleus | 28.28 | 14.98 |
| TraesCS2A01G330900.1 | Wheat | nucleus | 24.09 | 14.4 |
| TraesCS2D01G332100.1 | Wheat | nucleus | 23.95 | 14.33 |
| GSMUA_Achr9P12690_001 | Banana | nucleus | 24.36 | 14.24 |
| TraesCS2B01G351400.1 | Wheat | nucleus | 23.68 | 14.19 |
| GSMUA_Achr10P... | Banana | nucleus | 20.97 | 13.73 |
| GSMUA_Achr3P10940_001 | Banana | nucleus | 24.22 | 13.69 |
| GSMUA_Achr4P01620_001 | Banana | nucleus | 22.87 | 13.34 |
| GSMUA_Achr7P20270_001 | Banana | nucleus | 21.79 | 12.23 |
Protein Annotations
| EnsemblPlants:CDY20740 | EnsemblPlantsGene:GSBRNA2T00012961001 | PANTHER:PTHR35767 | PANTHER:PTHR35767:SF1 | ProteinID:CDY20740 | ProteinID:CDY20740.1 |
| SEG:seg | UniParc:UPI0004EECB25 | UniProt:A0A078G2J9 | MapMan:35.2 | : | : |
Description
BnaA02g08800DBnaA02g08800D protein [Source:UniProtKB/TrEMBL;Acc:A0A078G2J9]
Coordinates
chrLK032111:+:378170..381319
Molecular Weight (calculated)
82471.1 Da
IEP (calculated)
7.042
GRAVY (calculated)
-0.754
Length
739 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLSSTDKGS LNNPSSSSSF LHLTNSSHAL GQSHLSSFSI RDYAFSYRTK NIQKSWPFSS TSLQLCLKHS LTDPLPPFQP LGSEAKPKVI HVEARMLEKL
101: GSNHALAETE QGFLASGSKS KVQVAIVNKN PRKKCGLVVK HGACVNSVSK EAQGSLFSAS ESMGFRACPI CKTFSSASNT TLNAHMDQCL SVDSDQQPMS
201: KHRNKPRLKV KTLVDIYATA KRSTLEELDK RNGTKWSVVS SYSNQVVSDN KPEVSNKVKK RSVLRVGNDE DDGIGPVYID AEGQKLWILS DSPRKRVEDV
301: SEKKSSNKGQ GKRLRFKKHY KHCKVVPQSR KLTVREGNAS EIPEYQRVYS EECRAMERSE TPGPSQRRIL NQRMVTRSCL SRNENKKGRS ISDSLSVDPL
401: VLRGPRHASI DLTETVSTCF RSQNSWRSCG ESQVSRKSTK SPLRCSMPVD KVFASAPKGF LKLKKARLDF SENEDEDSGR WESEMTQERE LTDYDDNEET
501: DKVFLSSDPS VGSGEENDYE GWEVTGDNKV DDDDDMLYQT NDAEFESSFM EVDLIPIPGP PGSFLQSPWD METDATENHV NSSVTTSQFQ SSHDQLDLTD
601: RNSSESPLSA FLNFAAPETQ TFRDNEQSCC CQRKENVFED TTFGRPAPHM NQQDLDLLSK SVSKTPSVSN PVLRLMGKDL MVINQKEDTS HGDSSLIPTS
701: QFHDLAKTKQ VFPPVHLLHG PYGADSSHLD STTSFYNIP
101: GSNHALAETE QGFLASGSKS KVQVAIVNKN PRKKCGLVVK HGACVNSVSK EAQGSLFSAS ESMGFRACPI CKTFSSASNT TLNAHMDQCL SVDSDQQPMS
201: KHRNKPRLKV KTLVDIYATA KRSTLEELDK RNGTKWSVVS SYSNQVVSDN KPEVSNKVKK RSVLRVGNDE DDGIGPVYID AEGQKLWILS DSPRKRVEDV
301: SEKKSSNKGQ GKRLRFKKHY KHCKVVPQSR KLTVREGNAS EIPEYQRVYS EECRAMERSE TPGPSQRRIL NQRMVTRSCL SRNENKKGRS ISDSLSVDPL
401: VLRGPRHASI DLTETVSTCF RSQNSWRSCG ESQVSRKSTK SPLRCSMPVD KVFASAPKGF LKLKKARLDF SENEDEDSGR WESEMTQERE LTDYDDNEET
501: DKVFLSSDPS VGSGEENDYE GWEVTGDNKV DDDDDMLYQT NDAEFESSFM EVDLIPIPGP PGSFLQSPWD METDATENHV NSSVTTSQFQ SSHDQLDLTD
601: RNSSESPLSA FLNFAAPETQ TFRDNEQSCC CQRKENVFED TTFGRPAPHM NQQDLDLLSK SVSKTPSVSN PVLRLMGKDL MVINQKEDTS HGDSSLIPTS
701: QFHDLAKTKQ VFPPVHLLHG PYGADSSHLD STTSFYNIP
001: MFLSSTDQRS PSNNNPSSSS SFLHLTNSCD ELGQSHLSTF SIRDYAFSYR TKNIKKSWPF SSTSLQLCLN HGLTDPLPPI QPPEVKKPNI THVEAVSHKR
101: KSEKLGSYQI LVETTKQGFE NGLLASGSKS KIQVAMVNKN PRKKCGLIVK PGACVDSGGK EDHSSLFSAS DSMALRTCPI CKTFSSASNT TLNAHIDQCL
201: SVDSGQQPIR KPNRPKTKPR LKVKTMTDIY ASAKEGTLED LDKRNGTKWA MISSYSNRVV SDDKPEVSNK VKKRSVSRAR IDEDAAGIGP VYIDAKGQKL
301: RILSKFNEKA SDPSRREHEE VCEKKSSSEG KGGKSFRKKL WGEKHYKHRK LVPQNRKLTV RKSNASEIPE YRRGYSKEGK DFERSETSGP GQGRIFNQRM
401: LTKRSLSRHG KKNGTDICES ENWNSLSEDP LVLRSPSHVS TDLSETVSSP LNSIGSWRVC GESQVSGKSW ALSRNRSIES DLFVANPLRC LTPVARGVMK
501: FKKARMDFSE NEDEDIGKWE SEMTQERELS DYDGWDDDDG ETDKVALSSN PSFSGEDNDY ESYEETGDNK GGDDMLDKTK DADVEFESMV YEKTGCETAE
601: QESSFMEVDP IPIPGPPGSF LPSPWDMMGT DAVEHHGNSS VITSQVHSSQ DQFDLTDRNS SESPVSAISN FAAPETQTLS LHNIITTDKR PSRFRDNDQS
701: CCCQRKEKAL EDTTFCQPPP PQMIQQDLDF LSKSVPAVPS TPNPVLRLMG KDLMVINQRE EPSHNESSPK PTSQFLDLSK TQQASPSVNL LHPPYSGNGY
801: FDTNTSFYNI P
101: KSEKLGSYQI LVETTKQGFE NGLLASGSKS KIQVAMVNKN PRKKCGLIVK PGACVDSGGK EDHSSLFSAS DSMALRTCPI CKTFSSASNT TLNAHIDQCL
201: SVDSGQQPIR KPNRPKTKPR LKVKTMTDIY ASAKEGTLED LDKRNGTKWA MISSYSNRVV SDDKPEVSNK VKKRSVSRAR IDEDAAGIGP VYIDAKGQKL
301: RILSKFNEKA SDPSRREHEE VCEKKSSSEG KGGKSFRKKL WGEKHYKHRK LVPQNRKLTV RKSNASEIPE YRRGYSKEGK DFERSETSGP GQGRIFNQRM
401: LTKRSLSRHG KKNGTDICES ENWNSLSEDP LVLRSPSHVS TDLSETVSSP LNSIGSWRVC GESQVSGKSW ALSRNRSIES DLFVANPLRC LTPVARGVMK
501: FKKARMDFSE NEDEDIGKWE SEMTQERELS DYDGWDDDDG ETDKVALSSN PSFSGEDNDY ESYEETGDNK GGDDMLDKTK DADVEFESMV YEKTGCETAE
601: QESSFMEVDP IPIPGPPGSF LPSPWDMMGT DAVEHHGNSS VITSQVHSSQ DQFDLTDRNS SESPVSAISN FAAPETQTLS LHNIITTDKR PSRFRDNDQS
701: CCCQRKEKAL EDTTFCQPPP PQMIQQDLDF LSKSVPAVPS TPNPVLRLMG KDLMVINQRE EPSHNESSPK PTSQFLDLSK TQQASPSVNL LHPPYSGNGY
801: FDTNTSFYNI P
Arabidopsis Description
HAP8Hapless 8 [Source:UniProtKB/TrEMBL;Acc:Q9FH14]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.