Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY20740 | Canola | plastid | 61.78 | 67.79 |
| Bra035611.1-P | Field mustard | nucleus, plastid | 60.05 | 66.8 |
| CDY06514 | Canola | nucleus, plastid | 53.14 | 62.55 |
| Bra028941.1-P | Field mustard | nucleus, plastid | 57.34 | 61.75 |
| CDY36786 | Canola | nucleus, plastid | 57.34 | 61.75 |
| CDY11950 | Canola | nucleus | 57.83 | 61.71 |
| CDY62101 | Canola | nucleus | 50.31 | 59.65 |
| Bra002831.1-P | Field mustard | nucleus | 41.18 | 55.67 |
| CDY32802 | Canola | nucleus | 41.18 | 55.67 |
| AT5G56240.3 | Thale cress | nucleus | 43.9 | 36.07 |
| GSMUA_Achr5P04160_001 | Banana | nucleus | 20.1 | 17.53 |
| Solyc07g066200.2.1 | Tomato | nucleus | 28.24 | 17.09 |
| VIT_19s0015g01810.t01 | Wine grape | nucleus | 29.22 | 17.04 |
| Zm00001d003333_P005 | Maize | nucleus | 26.02 | 17.03 |
| OQU81762 | Sorghum | nucleus | 25.89 | 16.99 |
| Zm00001d025668_P005 | Maize | nucleus | 25.77 | 16.87 |
| Os04t0471400-01 | Rice | nucleus | 25.77 | 16.87 |
| GSMUA_Achr10P... | Banana | nucleus | 22.81 | 16.86 |
| PGSC0003DMT400056953 | Potato | nucleus | 27.87 | 16.2 |
| TraesCS2A01G330900.1 | Wheat | nucleus | 24.66 | 16.18 |
| TraesCS2D01G332100.1 | Wheat | nucleus | 24.54 | 16.11 |
| GSMUA_Achr10P... | Banana | nucleus | 22.19 | 15.94 |
| TraesCS2B01G351400.1 | Wheat | nucleus | 24.17 | 15.9 |
| GSMUA_Achr9P12690_001 | Banana | nucleus | 24.66 | 15.82 |
| GSMUA_Achr4P01620_001 | Banana | nucleus | 22.19 | 14.21 |
| GSMUA_Achr3P10940_001 | Banana | nucleus | 22.69 | 14.07 |
| GSMUA_Achr7P20270_001 | Banana | nucleus | 21.7 | 13.37 |
Protein Annotations
| MapMan:35.2 | EntrezGene:835724 | ProteinID:AED96740.1 | ProteinID:AED96741.1 | ArrayExpress:AT5G56250 | EnsemblPlantsGene:AT5G56250 |
| RefSeq:AT5G56250 | TAIR:AT5G56250 | RefSeq:AT5G56250-TAIR-G | EnsemblPlants:AT5G56250.1 | TAIR:AT5G56250.1 | EMBL:AY074372 |
| EMBL:AY096754 | Unigene:At.29398 | ProteinID:BAB09116.1 | Symbol:HAP8 | RefSeq:NP_200436.1 | RefSeq:NP_974941.1 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR35767 | PANTHER:PTHR35767:SF1 | UniProt:Q9FH14 | UniParc:UPI00000A9F71 | SEG:seg | : |
Description
HAP8Hapless 8 [Source:UniProtKB/TrEMBL;Acc:Q9FH14]
Coordinates
chr5:-:22768453..22773021
Molecular Weight (calculated)
90293.2 Da
IEP (calculated)
7.104
GRAVY (calculated)
-0.847
Length
811 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLSSTDQRS PSNNNPSSSS SFLHLTNSCD ELGQSHLSTF SIRDYAFSYR TKNIKKSWPF SSTSLQLCLN HGLTDPLPPI QPPEVKKPNI THVEAVSHKR
101: KSEKLGSYQI LVETTKQGFE NGLLASGSKS KIQVAMVNKN PRKKCGLIVK PGACVDSGGK EDHSSLFSAS DSMALRTCPI CKTFSSASNT TLNAHIDQCL
201: SVDSGQQPIR KPNRPKTKPR LKVKTMTDIY ASAKEGTLED LDKRNGTKWA MISSYSNRVV SDDKPEVSNK VKKRSVSRAR IDEDAAGIGP VYIDAKGQKL
301: RILSKFNEKA SDPSRREHEE VCEKKSSSEG KGGKSFRKKL WGEKHYKHRK LVPQNRKLTV RKSNASEIPE YRRGYSKEGK DFERSETSGP GQGRIFNQRM
401: LTKRSLSRHG KKNGTDICES ENWNSLSEDP LVLRSPSHVS TDLSETVSSP LNSIGSWRVC GESQVSGKSW ALSRNRSIES DLFVANPLRC LTPVARGVMK
501: FKKARMDFSE NEDEDIGKWE SEMTQERELS DYDGWDDDDG ETDKVALSSN PSFSGEDNDY ESYEETGDNK GGDDMLDKTK DADVEFESMV YEKTGCETAE
601: QESSFMEVDP IPIPGPPGSF LPSPWDMMGT DAVEHHGNSS VITSQVHSSQ DQFDLTDRNS SESPVSAISN FAAPETQTLS LHNIITTDKR PSRFRDNDQS
701: CCCQRKEKAL EDTTFCQPPP PQMIQQDLDF LSKSVPAVPS TPNPVLRLMG KDLMVINQRE EPSHNESSPK PTSQFLDLSK TQQASPSVNL LHPPYSGNGY
801: FDTNTSFYNI P
101: KSEKLGSYQI LVETTKQGFE NGLLASGSKS KIQVAMVNKN PRKKCGLIVK PGACVDSGGK EDHSSLFSAS DSMALRTCPI CKTFSSASNT TLNAHIDQCL
201: SVDSGQQPIR KPNRPKTKPR LKVKTMTDIY ASAKEGTLED LDKRNGTKWA MISSYSNRVV SDDKPEVSNK VKKRSVSRAR IDEDAAGIGP VYIDAKGQKL
301: RILSKFNEKA SDPSRREHEE VCEKKSSSEG KGGKSFRKKL WGEKHYKHRK LVPQNRKLTV RKSNASEIPE YRRGYSKEGK DFERSETSGP GQGRIFNQRM
401: LTKRSLSRHG KKNGTDICES ENWNSLSEDP LVLRSPSHVS TDLSETVSSP LNSIGSWRVC GESQVSGKSW ALSRNRSIES DLFVANPLRC LTPVARGVMK
501: FKKARMDFSE NEDEDIGKWE SEMTQERELS DYDGWDDDDG ETDKVALSSN PSFSGEDNDY ESYEETGDNK GGDDMLDKTK DADVEFESMV YEKTGCETAE
601: QESSFMEVDP IPIPGPPGSF LPSPWDMMGT DAVEHHGNSS VITSQVHSSQ DQFDLTDRNS SESPVSAISN FAAPETQTLS LHNIITTDKR PSRFRDNDQS
701: CCCQRKEKAL EDTTFCQPPP PQMIQQDLDF LSKSVPAVPS TPNPVLRLMG KDLMVINQRE EPSHNESSPK PTSQFLDLSK TQQASPSVNL LHPPYSGNGY
801: FDTNTSFYNI P
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.