Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 3
- cytosol 1
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G56250.1 | EER95307 | AT1G49850.1 | 21798944 |
| AT5G56250.1 | KXG23810 | AT1G49850.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d003333_P005 | Maize | nucleus | 89.4 | 89.18 |
| Zm00001d025668_P005 | Maize | nucleus | 87.78 | 87.57 |
| Os04t0471400-01 | Rice | nucleus | 64.32 | 64.16 |
| TraesCS2D01G332100.1 | Wheat | nucleus | 55.83 | 55.87 |
| TraesCS2A01G330900.1 | Wheat | nucleus | 55.74 | 55.74 |
| TraesCS2B01G351400.1 | Wheat | nucleus | 55.42 | 55.56 |
| GSMUA_Achr4P01620_001 | Banana | nucleus | 30.5 | 29.76 |
| GSMUA_Achr9P12690_001 | Banana | nucleus | 30.34 | 29.67 |
| GSMUA_Achr10P... | Banana | nucleus | 25.73 | 28.99 |
| GSMUA_Achr5P04160_001 | Banana | nucleus | 21.52 | 28.6 |
| CDY36785 | Canola | nucleus | 12.22 | 26.03 |
| CDY20740 | Canola | plastid | 15.53 | 25.98 |
| Bra035611.1-P | Field mustard | nucleus, plastid | 15.29 | 25.93 |
| AT5G56250.1 | Thale cress | nucleus | 16.99 | 25.89 |
| GSMUA_Achr3P10940_001 | Banana | nucleus | 27.02 | 25.54 |
| GSMUA_Achr10P... | Banana | nucleus | 22.73 | 24.89 |
| CDY06514 | Canola | nucleus, plastid | 13.59 | 24.38 |
| Bra028941.1-P | Field mustard | nucleus, plastid | 14.81 | 24.3 |
| CDY36786 | Canola | nucleus, plastid | 14.81 | 24.3 |
| GSMUA_Achr7P20270_001 | Banana | nucleus | 25.81 | 24.24 |
| CDY62101 | Canola | nucleus | 13.35 | 24.12 |
| CDY11950 | Canola | nucleus | 14.56 | 23.68 |
| CDY06515 | Canola | nucleus, plastid | 17.07 | 23.34 |
| Bra035610.1-P | Field mustard | nucleus, plastid | 17.31 | 22.34 |
| CDY32803 | Canola | nucleus | 17.07 | 22.21 |
| Bra002832.1-P | Field mustard | nucleus | 17.39 | 22.19 |
| CDY17406 | Canola | nucleus, plastid | 16.5 | 21.86 |
| CDY11951 | Canola | nucleus, plastid | 15.78 | 21.86 |
| CDY32802 | Canola | nucleus | 10.52 | 21.67 |
| Bra002831.1-P | Field mustard | nucleus | 10.52 | 21.67 |
| CDY65749 | Canola | nucleus | 15.45 | 21.66 |
| AT5G56240.3 | Thale cress | nucleus | 17.07 | 21.38 |
| Bra028942.1-P | Field mustard | nucleus | 16.1 | 20.75 |
| VIT_19s0015g01810.t01 | Wine grape | nucleus | 21.93 | 19.48 |
| Solyc07g066200.2.1 | Tomato | nucleus | 21.04 | 19.4 |
| CDY36783 | Canola | cytosol | 1.86 | 19.33 |
| PGSC0003DMT400056953 | Potato | nucleus | 21.68 | 19.21 |
Protein Annotations
| EnsemblPlants:OQU81762 | EnsemblPlantsGene:SORBI_3006G115600 | PANTHER:PTHR35767 | PANTHER:PTHR35767:SF1 | ProteinID:EES10973.2 | ProteinID:OQU81762 |
| ProteinID:OQU81762.1 | ProteinID:OQU81763.1 | ProteinID:OQU81764.1 | SEG:seg | UniParc:UPI00081AB490 | UniProt:C5YAB7 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr6:-:48331246..48338233
Molecular Weight (calculated)
135351.0 Da
IEP (calculated)
6.465
GRAVY (calculated)
-0.732
Length
1236 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLSSEHPSGP SCSSKSAAPG VSADPATTSV AEEPASQDPR DLVQPYPKFS IRDYVFAARS KGIKRSWPFH PHSLELCLNH GVKDPLPPFE PPDLIRSQPL
0101: NTSTDVEQPA ACSEAIISVG LVKNRDAGSS NEYTGDINFQ SCQPVDESLA PTPYTSPEDG KSSIDQVGST NESDHTDEAI PIDLQDNSCT KASRRTEVAV
0201: PLRRLRNIDS SCEPSEKKCK FVVKLGASTD IRRAEDIASN SSSVSDPMAS KTCPVCKVFA STSNTTLNAH IDQCLSAESN TEHVETVLVK SKVKPRKKRL
0301: MVDIYKTALP YTLEDLDRRN GTNWAVELAM SPVSKEVCTE NRSPEVVSFD RRDDEREGDV YVDSNGIKIR ILSKCNDVPS VRDDLGSRKV VKHGTGKGIL
0401: TSKKMLKSKL LKNKKLKMHG KKYNKTSQLN SQVQAYPHDD INEETSEEEQ QAWNPSESTS NCGSRTMQQW VCSKRSDINK SLSRKHSGKI FDKVTPGAQK
0501: SDRSSMLGFN DSQVRESPAG VFSSESPEYM ATTSEAIGVE QSKGPSKVLR SIPTWSSKTH LQSTVMPKVP RSAAALAKRK IKEIGRREAT KLDNYDIVRN
0601: HTSAKRSEAR SLSLSTAGPS NGPNRLASTS KKIRKHRSLL RTGKCAFSPS STRLVHGFGE EHELDTSHVN KKLRVTSNEG PKKFLKHTEE DTADNDFSFA
0701: SDMPVSGQQN DQYDIAQETE GTQMDCEGED AETDVPYDSV SRSDPADCCN QISDVSLSPE NNRTADDDVL VEGYSVAVED PDSSEQLAHG HESNSAANNE
0801: VEEWQMDPTS TKESSPCLTS NRDMGPGGPQ DNSSITSNGE NSNQEHDLPL GQDSLDSPIS TASTMSPPAA LKDSRTNEEE PGPSTGRTVE EQITGCLNQE
0901: TKTIPVATEG EQLPNEKPFR CSCKENISRE SHQSAVARPM LNFTGKQVPQ LHIGSRASSS FSTYQRTSTK PNPCLDSHDH LLAAKVSAES AINLPYATDC
1001: ISPSLQTQLP SPSNPILRLM GKNLMVMNNE ESLHPQAPSS DYILRGNYAA PVGFMPPNYQ HLSNSAFINM PPTTASHQIP LPSVQASSFV APPLHGGSMM
1101: QSDHHSQQKS YRNIMPVMHH PTYMMKEVIV INDSPERRSE PQASMLFPPA TPPTLPVPNN MPPHPFYRLP PQSPVFPRER AVGSMPVYAN VGSVVGVNSS
1201: QGSQTEVANS YMPNPFFVQS RTGYINPPVY YSQNLR
0101: NTSTDVEQPA ACSEAIISVG LVKNRDAGSS NEYTGDINFQ SCQPVDESLA PTPYTSPEDG KSSIDQVGST NESDHTDEAI PIDLQDNSCT KASRRTEVAV
0201: PLRRLRNIDS SCEPSEKKCK FVVKLGASTD IRRAEDIASN SSSVSDPMAS KTCPVCKVFA STSNTTLNAH IDQCLSAESN TEHVETVLVK SKVKPRKKRL
0301: MVDIYKTALP YTLEDLDRRN GTNWAVELAM SPVSKEVCTE NRSPEVVSFD RRDDEREGDV YVDSNGIKIR ILSKCNDVPS VRDDLGSRKV VKHGTGKGIL
0401: TSKKMLKSKL LKNKKLKMHG KKYNKTSQLN SQVQAYPHDD INEETSEEEQ QAWNPSESTS NCGSRTMQQW VCSKRSDINK SLSRKHSGKI FDKVTPGAQK
0501: SDRSSMLGFN DSQVRESPAG VFSSESPEYM ATTSEAIGVE QSKGPSKVLR SIPTWSSKTH LQSTVMPKVP RSAAALAKRK IKEIGRREAT KLDNYDIVRN
0601: HTSAKRSEAR SLSLSTAGPS NGPNRLASTS KKIRKHRSLL RTGKCAFSPS STRLVHGFGE EHELDTSHVN KKLRVTSNEG PKKFLKHTEE DTADNDFSFA
0701: SDMPVSGQQN DQYDIAQETE GTQMDCEGED AETDVPYDSV SRSDPADCCN QISDVSLSPE NNRTADDDVL VEGYSVAVED PDSSEQLAHG HESNSAANNE
0801: VEEWQMDPTS TKESSPCLTS NRDMGPGGPQ DNSSITSNGE NSNQEHDLPL GQDSLDSPIS TASTMSPPAA LKDSRTNEEE PGPSTGRTVE EQITGCLNQE
0901: TKTIPVATEG EQLPNEKPFR CSCKENISRE SHQSAVARPM LNFTGKQVPQ LHIGSRASSS FSTYQRTSTK PNPCLDSHDH LLAAKVSAES AINLPYATDC
1001: ISPSLQTQLP SPSNPILRLM GKNLMVMNNE ESLHPQAPSS DYILRGNYAA PVGFMPPNYQ HLSNSAFINM PPTTASHQIP LPSVQASSFV APPLHGGSMM
1101: QSDHHSQQKS YRNIMPVMHH PTYMMKEVIV INDSPERRSE PQASMLFPPA TPPTLPVPNN MPPHPFYRLP PQSPVFPRER AVGSMPVYAN VGSVVGVNSS
1201: QGSQTEVANS YMPNPFFVQS RTGYINPPVY YSQNLR
001: MFLSSTDQRS PSNNNPSSSS SFLHLTNSCD ELGQSHLSTF SIRDYAFSYR TKNIKKSWPF SSTSLQLCLN HGLTDPLPPI QPPEVKKPNI THVEAVSHKR
101: KSEKLGSYQI LVETTKQGFE NGLLASGSKS KIQVAMVNKN PRKKCGLIVK PGACVDSGGK EDHSSLFSAS DSMALRTCPI CKTFSSASNT TLNAHIDQCL
201: SVDSGQQPIR KPNRPKTKPR LKVKTMTDIY ASAKEGTLED LDKRNGTKWA MISSYSNRVV SDDKPEVSNK VKKRSVSRAR IDEDAAGIGP VYIDAKGQKL
301: RILSKFNEKA SDPSRREHEE VCEKKSSSEG KGGKSFRKKL WGEKHYKHRK LVPQNRKLTV RKSNASEIPE YRRGYSKEGK DFERSETSGP GQGRIFNQRM
401: LTKRSLSRHG KKNGTDICES ENWNSLSEDP LVLRSPSHVS TDLSETVSSP LNSIGSWRVC GESQVSGKSW ALSRNRSIES DLFVANPLRC LTPVARGVMK
501: FKKARMDFSE NEDEDIGKWE SEMTQERELS DYDGWDDDDG ETDKVALSSN PSFSGEDNDY ESYEETGDNK GGDDMLDKTK DADVEFESMV YEKTGCETAE
601: QESSFMEVDP IPIPGPPGSF LPSPWDMMGT DAVEHHGNSS VITSQVHSSQ DQFDLTDRNS SESPVSAISN FAAPETQTLS LHNIITTDKR PSRFRDNDQS
701: CCCQRKEKAL EDTTFCQPPP PQMIQQDLDF LSKSVPAVPS TPNPVLRLMG KDLMVINQRE EPSHNESSPK PTSQFLDLSK TQQASPSVNL LHPPYSGNGY
801: FDTNTSFYNI P
101: KSEKLGSYQI LVETTKQGFE NGLLASGSKS KIQVAMVNKN PRKKCGLIVK PGACVDSGGK EDHSSLFSAS DSMALRTCPI CKTFSSASNT TLNAHIDQCL
201: SVDSGQQPIR KPNRPKTKPR LKVKTMTDIY ASAKEGTLED LDKRNGTKWA MISSYSNRVV SDDKPEVSNK VKKRSVSRAR IDEDAAGIGP VYIDAKGQKL
301: RILSKFNEKA SDPSRREHEE VCEKKSSSEG KGGKSFRKKL WGEKHYKHRK LVPQNRKLTV RKSNASEIPE YRRGYSKEGK DFERSETSGP GQGRIFNQRM
401: LTKRSLSRHG KKNGTDICES ENWNSLSEDP LVLRSPSHVS TDLSETVSSP LNSIGSWRVC GESQVSGKSW ALSRNRSIES DLFVANPLRC LTPVARGVMK
501: FKKARMDFSE NEDEDIGKWE SEMTQERELS DYDGWDDDDG ETDKVALSSN PSFSGEDNDY ESYEETGDNK GGDDMLDKTK DADVEFESMV YEKTGCETAE
601: QESSFMEVDP IPIPGPPGSF LPSPWDMMGT DAVEHHGNSS VITSQVHSSQ DQFDLTDRNS SESPVSAISN FAAPETQTLS LHNIITTDKR PSRFRDNDQS
701: CCCQRKEKAL EDTTFCQPPP PQMIQQDLDF LSKSVPAVPS TPNPVLRLMG KDLMVINQRE EPSHNESSPK PTSQFLDLSK TQQASPSVNL LHPPYSGNGY
801: FDTNTSFYNI P
Arabidopsis Description
HAP8Hapless 8 [Source:UniProtKB/TrEMBL;Acc:Q9FH14]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.