Subcellular Localization
min:
: max
Winner_takes_all: nucleus, plastid
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 4
- cytosol 1
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra014221.1-P | |
| Bra039652.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G56250.1 | Bra014221.1-P | AT1G49850.1 | 21798944 |
| AT5G56250.1 | Bra039652.1-P | AT1G49850.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY20740 | Canola | plastid | 95.47 | 94.18 |
| AT5G56250.1 | Thale cress | nucleus | 66.8 | 60.05 |
| Bra028941.1-P | Field mustard | nucleus, plastid | 58.16 | 56.31 |
| Bra002831.1-P | Field mustard | nucleus | 43.21 | 52.5 |
| Bra002832.1-P | Field mustard | nucleus | 41.7 | 31.37 |
| Bra035610.1-P | Field mustard | nucleus, plastid | 41.15 | 31.32 |
| Bra028942.1-P | Field mustard | nucleus | 39.92 | 30.34 |
| GSMUA_Achr5P04160_001 | Banana | nucleus | 21.67 | 16.99 |
| VIT_19s0015g01810.t01 | Wine grape | nucleus | 30.59 | 16.03 |
| Solyc07g066200.2.1 | Tomato | nucleus | 28.94 | 15.75 |
| GSMUA_Achr10P... | Banana | nucleus | 23.59 | 15.68 |
| OQU81762 | Sorghum | nucleus | 25.93 | 15.29 |
| Zm00001d025668_P005 | Maize | nucleus | 25.65 | 15.09 |
| Zm00001d003333_P005 | Maize | nucleus | 25.65 | 15.09 |
| Os04t0471400-01 | Rice | nucleus | 25.65 | 15.09 |
| PGSC0003DMT400056953 | Potato | nucleus | 28.81 | 15.05 |
| TraesCS2A01G330900.1 | Wheat | nucleus | 24.42 | 14.4 |
| GSMUA_Achr9P12690_001 | Banana | nucleus | 24.97 | 14.4 |
| TraesCS2D01G332100.1 | Wheat | nucleus | 24.28 | 14.33 |
| TraesCS2B01G351400.1 | Wheat | nucleus | 23.87 | 14.11 |
| GSMUA_Achr10P... | Banana | nucleus | 21.67 | 13.99 |
| GSMUA_Achr3P10940_001 | Banana | nucleus | 24.69 | 13.76 |
| GSMUA_Achr4P01620_001 | Banana | nucleus | 23.05 | 13.26 |
| GSMUA_Achr7P20270_001 | Banana | nucleus | 22.09 | 12.23 |
Protein Annotations
Description
AT5G56250 (E=1e-199) HAP8 | HAP8 (HAPLESS 8)
Coordinates
chrA02:+:7303408..7306534
Molecular Weight (calculated)
81131.4 Da
IEP (calculated)
6.788
GRAVY (calculated)
-0.771
Length
729 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLSSTDEGS PNNPSSSSSF LHLTNSSHAL GQSHLSSFSI RDYAFSYRTK NIQKSWPFSS TSLQLCLKHG LTDPLPPFQP LGSEAKLKVI HVEARMLEKL
101: GSKHALAETE QGFLVSGSKS KVQVAIVNKN PRKKCGLVVK HGACVNSESK EAQGSLFSAS ESMGFRACPI CKTFSSASNT TLNAHMDQCL SVDSDQQPMS
201: KHRNKPRLKV KTLVDIYATA KRSTLEELDK RNGTKWSVVS SYSNQVVSDN KHEVSNKVKK RSVLRVGNDE DGGIGPVYID AEGQKLRILS DSPRKHVEDV
301: SEKKSSNKGQ GKRLRFKKHY KHCKVVPQSR ILTVGEGNAS EIPEYQRGYS EECRAMERSE TPGPSQRRIL SQRMVTRSCL SRNENKKGRS ISDSLSADPL
401: LIRGPRHASV DLSETVSTCF RSQNSWRSCG ESQVSRKSTK SPLRCSMPVD KVFASAPKGF LKLKKARLDF SENEDEDSGR WESEMTQERE LTDYDDNEET
501: DKVFLSSDPS VGSGEENDYE GWEVTGDNKV DDDDDMLYQT NDAEFESSFM EVDLIPIPGP PGSFLPSPWD METDATENHV NSSVTTSQFQ SSHDQLDLTD
601: RKSSESPETQ TFRDNDQSCC CQRKENVFED TTFGKPAPHM NQQDLDLSSK SVSKTPSVSN PVLRLMGKDL MVINQIEDTS HGDSSLIPTS QFHDLSKTKQ
701: VFPPVHLLHG PYGADSSYLD STTSFYNIP
101: GSKHALAETE QGFLVSGSKS KVQVAIVNKN PRKKCGLVVK HGACVNSESK EAQGSLFSAS ESMGFRACPI CKTFSSASNT TLNAHMDQCL SVDSDQQPMS
201: KHRNKPRLKV KTLVDIYATA KRSTLEELDK RNGTKWSVVS SYSNQVVSDN KHEVSNKVKK RSVLRVGNDE DGGIGPVYID AEGQKLRILS DSPRKHVEDV
301: SEKKSSNKGQ GKRLRFKKHY KHCKVVPQSR ILTVGEGNAS EIPEYQRGYS EECRAMERSE TPGPSQRRIL SQRMVTRSCL SRNENKKGRS ISDSLSADPL
401: LIRGPRHASV DLSETVSTCF RSQNSWRSCG ESQVSRKSTK SPLRCSMPVD KVFASAPKGF LKLKKARLDF SENEDEDSGR WESEMTQERE LTDYDDNEET
501: DKVFLSSDPS VGSGEENDYE GWEVTGDNKV DDDDDMLYQT NDAEFESSFM EVDLIPIPGP PGSFLPSPWD METDATENHV NSSVTTSQFQ SSHDQLDLTD
601: RKSSESPETQ TFRDNDQSCC CQRKENVFED TTFGKPAPHM NQQDLDLSSK SVSKTPSVSN PVLRLMGKDL MVINQIEDTS HGDSSLIPTS QFHDLSKTKQ
701: VFPPVHLLHG PYGADSSYLD STTSFYNIP
001: MFLSSTDQRS PSNNNPSSSS SFLHLTNSCD ELGQSHLSTF SIRDYAFSYR TKNIKKSWPF SSTSLQLCLN HGLTDPLPPI QPPEVKKPNI THVEAVSHKR
101: KSEKLGSYQI LVETTKQGFE NGLLASGSKS KIQVAMVNKN PRKKCGLIVK PGACVDSGGK EDHSSLFSAS DSMALRTCPI CKTFSSASNT TLNAHIDQCL
201: SVDSGQQPIR KPNRPKTKPR LKVKTMTDIY ASAKEGTLED LDKRNGTKWA MISSYSNRVV SDDKPEVSNK VKKRSVSRAR IDEDAAGIGP VYIDAKGQKL
301: RILSKFNEKA SDPSRREHEE VCEKKSSSEG KGGKSFRKKL WGEKHYKHRK LVPQNRKLTV RKSNASEIPE YRRGYSKEGK DFERSETSGP GQGRIFNQRM
401: LTKRSLSRHG KKNGTDICES ENWNSLSEDP LVLRSPSHVS TDLSETVSSP LNSIGSWRVC GESQVSGKSW ALSRNRSIES DLFVANPLRC LTPVARGVMK
501: FKKARMDFSE NEDEDIGKWE SEMTQERELS DYDGWDDDDG ETDKVALSSN PSFSGEDNDY ESYEETGDNK GGDDMLDKTK DADVEFESMV YEKTGCETAE
601: QESSFMEVDP IPIPGPPGSF LPSPWDMMGT DAVEHHGNSS VITSQVHSSQ DQFDLTDRNS SESPVSAISN FAAPETQTLS LHNIITTDKR PSRFRDNDQS
701: CCCQRKEKAL EDTTFCQPPP PQMIQQDLDF LSKSVPAVPS TPNPVLRLMG KDLMVINQRE EPSHNESSPK PTSQFLDLSK TQQASPSVNL LHPPYSGNGY
801: FDTNTSFYNI P
101: KSEKLGSYQI LVETTKQGFE NGLLASGSKS KIQVAMVNKN PRKKCGLIVK PGACVDSGGK EDHSSLFSAS DSMALRTCPI CKTFSSASNT TLNAHIDQCL
201: SVDSGQQPIR KPNRPKTKPR LKVKTMTDIY ASAKEGTLED LDKRNGTKWA MISSYSNRVV SDDKPEVSNK VKKRSVSRAR IDEDAAGIGP VYIDAKGQKL
301: RILSKFNEKA SDPSRREHEE VCEKKSSSEG KGGKSFRKKL WGEKHYKHRK LVPQNRKLTV RKSNASEIPE YRRGYSKEGK DFERSETSGP GQGRIFNQRM
401: LTKRSLSRHG KKNGTDICES ENWNSLSEDP LVLRSPSHVS TDLSETVSSP LNSIGSWRVC GESQVSGKSW ALSRNRSIES DLFVANPLRC LTPVARGVMK
501: FKKARMDFSE NEDEDIGKWE SEMTQERELS DYDGWDDDDG ETDKVALSSN PSFSGEDNDY ESYEETGDNK GGDDMLDKTK DADVEFESMV YEKTGCETAE
601: QESSFMEVDP IPIPGPPGSF LPSPWDMMGT DAVEHHGNSS VITSQVHSSQ DQFDLTDRNS SESPVSAISN FAAPETQTLS LHNIITTDKR PSRFRDNDQS
701: CCCQRKEKAL EDTTFCQPPP PQMIQQDLDF LSKSVPAVPS TPNPVLRLMG KDLMVINQRE EPSHNESSPK PTSQFLDLSK TQQASPSVNL LHPPYSGNGY
801: FDTNTSFYNI P
Arabidopsis Description
HAP8Hapless 8 [Source:UniProtKB/TrEMBL;Acc:Q9FH14]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.