Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY32803 | Canola | nucleus | 95.15 | 97.05 |
| Bra028942.1-P | Field mustard | nucleus | 59.96 | 60.58 |
| AT5G56240.3 | Thale cress | nucleus | 60.37 | 59.27 |
| Bra035610.1-P | Field mustard | nucleus, plastid | 56.97 | 57.62 |
| Bra035611.1-P | Field mustard | nucleus, plastid | 31.37 | 41.7 |
| Bra028941.1-P | Field mustard | nucleus, plastid | 30.86 | 39.71 |
| Bra002831.1-P | Field mustard | nucleus | 21.77 | 35.17 |
| GSMUA_Achr5P04160_001 | Banana | nucleus | 17.85 | 18.6 |
| Solyc07g066200.2.1 | Tomato | nucleus | 25.59 | 18.51 |
| PGSC0003DMT400056953 | Potato | nucleus | 25.7 | 17.85 |
| VIT_19s0015g01810.t01 | Wine grape | nucleus | 25.39 | 17.69 |
| OQU81762 | Sorghum | nucleus | 22.19 | 17.39 |
| Zm00001d003333_P005 | Maize | nucleus | 21.57 | 16.87 |
| Zm00001d025668_P005 | Maize | nucleus | 21.47 | 16.79 |
| Os04t0471400-01 | Rice | nucleus | 21.47 | 16.79 |
| GSMUA_Achr10P... | Banana | nucleus | 18.78 | 16.59 |
| TraesCS2A01G330900.1 | Wheat | nucleus | 19.92 | 15.61 |
| TraesCS2B01G351400.1 | Wheat | nucleus | 19.81 | 15.57 |
| TraesCS2D01G332100.1 | Wheat | nucleus | 19.81 | 15.55 |
| GSMUA_Achr10P... | Banana | nucleus | 17.13 | 14.7 |
| GSMUA_Achr9P12690_001 | Banana | nucleus | 19.09 | 14.64 |
| GSMUA_Achr4P01620_001 | Banana | nucleus | 18.68 | 14.29 |
| GSMUA_Achr7P20270_001 | Banana | nucleus | 18.78 | 13.83 |
| GSMUA_Achr3P10940_001 | Banana | nucleus | 17.23 | 12.77 |
Protein Annotations
Description
AT5G56240 (E=2e-279) | INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: HAP8 (HAPLESS 8) (TAIR:AT5G56250.2); Has 259 Blast hits to 240 proteins in 69 species: Archae - 0; Bacteria - 13; Metazoa - 67; Fungi - 34; Plants - 31; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).
Coordinates
chrA10:-:7250038..7253640
Molecular Weight (calculated)
107461.0 Da
IEP (calculated)
8.493
GRAVY (calculated)
-0.777
Length
969 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLSTENPPH DHPLPSSPSF VHLTSTSSHE LAQSHPHSFS IRDYAYSNRK NNINNNWPFS PKSLQLLSTH GVTDPLPPFQ ITVSSSSGKQ IVSHVQRGRD
101: LAKLRLNQTI AKTRQGDCSQ SKIVKNGLFR STSVSKSKEE IVLVAATSNN HHKSKTCGRG GGGMVKSKEA ISCVGIESVM ASKTCPICKT FSSASNTTLN
201: AHIDQCISID SSPVISKPNK PRVNQPLSVD SAVPLVTSKP SKPRGKPLMK VKTMVDIYAT AKECTLEELD KRNGTNWAVI SSYTNRVVAD KSEVSKKRKV
301: APVGVGPVYV DAKGQKLRII TEFSEKKTSS TTRWREQQED GSNEKKSSSQ GSKENSKSSR KRRQGKKHHK YLKLNNSHKT NESEVPECQR GVSGEGSSTG
401: HRRIFNQRML AKRVSISKKL NEKGHKVYAL RDQQSEDNDD DSWSGGDHVV LRGAALSALD KQKLRREVSG RNKTMFGSKR AQRVRMSEKE ETSLAGAHLN
501: TVRLKKSLSS IQEDKYPPGK NVREVTDASP RATSLRKLLP PFVANGWRRL SLPVELKRAR LDLSDEEEEE TGRWESEMTQ ERELSDDDYV SGDNGERNEV
601: VHRSNPLTFS GYNEYEYEDD DDEESSEEEE GANVLDKTDE FYQSDTPPSN ETIPSERAYL YNSEGVENMV YEEDDDVRFV SEVGKGSLYV EVDTIPIPGP
701: PGSFIPSPRG MSYDEHLGNS SVITSQLQSS MDQLDRHSSE SPVSAFSNFA AARLSFPTEL FSMDVPSSYS TTPVSFSVPS HPEKMAVDKA ITPPSFRNND
801: GEPCCCQRKE RISEGVTLNH QPSHLLQRRA AASSSSMSMN LTKPLTCLDP NHPFEQSPPY MIQQEFDLHS KFSNKTNVNG AAVVPPSPSN SVLRLMGKDL
901: MVMNQGEASL ASLKPTTQFL DPPPLSAGAG LYLNTGLYLR NSLEPTHQTQ TQASAFRNSF DHVRYFSQS
101: LAKLRLNQTI AKTRQGDCSQ SKIVKNGLFR STSVSKSKEE IVLVAATSNN HHKSKTCGRG GGGMVKSKEA ISCVGIESVM ASKTCPICKT FSSASNTTLN
201: AHIDQCISID SSPVISKPNK PRVNQPLSVD SAVPLVTSKP SKPRGKPLMK VKTMVDIYAT AKECTLEELD KRNGTNWAVI SSYTNRVVAD KSEVSKKRKV
301: APVGVGPVYV DAKGQKLRII TEFSEKKTSS TTRWREQQED GSNEKKSSSQ GSKENSKSSR KRRQGKKHHK YLKLNNSHKT NESEVPECQR GVSGEGSSTG
401: HRRIFNQRML AKRVSISKKL NEKGHKVYAL RDQQSEDNDD DSWSGGDHVV LRGAALSALD KQKLRREVSG RNKTMFGSKR AQRVRMSEKE ETSLAGAHLN
501: TVRLKKSLSS IQEDKYPPGK NVREVTDASP RATSLRKLLP PFVANGWRRL SLPVELKRAR LDLSDEEEEE TGRWESEMTQ ERELSDDDYV SGDNGERNEV
601: VHRSNPLTFS GYNEYEYEDD DDEESSEEEE GANVLDKTDE FYQSDTPPSN ETIPSERAYL YNSEGVENMV YEEDDDVRFV SEVGKGSLYV EVDTIPIPGP
701: PGSFIPSPRG MSYDEHLGNS SVITSQLQSS MDQLDRHSSE SPVSAFSNFA AARLSFPTEL FSMDVPSSYS TTPVSFSVPS HPEKMAVDKA ITPPSFRNND
801: GEPCCCQRKE RISEGVTLNH QPSHLLQRRA AASSSSMSMN LTKPLTCLDP NHPFEQSPPY MIQQEFDLHS KFSNKTNVNG AAVVPPSPSN SVLRLMGKDL
901: MVMNQGEASL ASLKPTTQFL DPPPLSAGAG LYLNTGLYLR NSLEPTHQTQ TQASAFRNSF DHVRYFSQS
001: MFLSTENPPN DPLSSSSSPF LQHLTSSSHE LGQSHLSNFS IRDYAYSNRK NNIKNNWPFS SKSLQLFSTH GVTNPLPPFQ KFSTVSSKFE TTASPSSGKQ
101: IVSSYVHQGR DLDLAKLGLN QTVAETSSKG VCSQSRIIEN GLFPSTSVSK SEVEILVATT SNKKDNHSRK CGRGMVKSKE DSCAGLVTTS ESIMASKTCP
201: ICKTFSSASN TTLNAHIDQC LSVDSALLPP VVFSKPNKPR SKPPRVKVKT MVDIYASAKQ GTLEDLDRRN GTKWVSILSY SNRVVADKSE VSKKRKVSPV
301: GVGPVYIDAK GQKLRILSGF SEKKSSTTPL REQHEDGSSD KKCLGQGSKG TNKSLRKIRR GKKPHKFVKL TNHKADGPEI RGVQRGFSGE GSHMGHHRRI
401: YNQRMLAKRG LVSKKLNEKG HELSEDDEDT WSGGDPTVLR GTDLSATDSY PLKKQKLGSE VAGRKKTLFR SQSAQSRSFR VPQSEKEDES LEGVNINRLK
501: KSVASFQEDK YPPGKKFCSD ASPRGTSMRK FSPPFVPNAW RRLSMPVELK KARLDFSEEK DDEETGKWES EMTHERELRD DDYVSGDDGE NNEVLLRSNP
601: SSSGYDDYND DDEESSEEEG DNNKRAHVLD QTDYTGAEFY QSESDSPTSI EILPSERAMY YSEAGNMIYG QTSCKEDERF DSEVGQGSLF VEVDTIPIPG
701: PPGSFLPSPR DMGFDENLGN SSVITSQVQS SMDQLDRNSS ESPVSAVSNF AAGRLNFPAE LSSFRENFSP DIAMSYSTTP MSFCVPSHHG TITEAEPITI
801: DKTISPSRFR NNDQESCCCQ RKERISEGIT LNHQGSHLLQ RRAASSSNTM NLTNSPTRLD PNHPFEQSPY KTQQALDLQM SKFSSRKSLN AVVPPSPSNP
901: VLRLMGKDLM VMNQGEADEE ASRSSLTPNP QFVDPPCGGT GLYFNTGLYL RNSFDSTHQP QVQAQQQSQA AAFRNNFDHV RYFSPS
101: IVSSYVHQGR DLDLAKLGLN QTVAETSSKG VCSQSRIIEN GLFPSTSVSK SEVEILVATT SNKKDNHSRK CGRGMVKSKE DSCAGLVTTS ESIMASKTCP
201: ICKTFSSASN TTLNAHIDQC LSVDSALLPP VVFSKPNKPR SKPPRVKVKT MVDIYASAKQ GTLEDLDRRN GTKWVSILSY SNRVVADKSE VSKKRKVSPV
301: GVGPVYIDAK GQKLRILSGF SEKKSSTTPL REQHEDGSSD KKCLGQGSKG TNKSLRKIRR GKKPHKFVKL TNHKADGPEI RGVQRGFSGE GSHMGHHRRI
401: YNQRMLAKRG LVSKKLNEKG HELSEDDEDT WSGGDPTVLR GTDLSATDSY PLKKQKLGSE VAGRKKTLFR SQSAQSRSFR VPQSEKEDES LEGVNINRLK
501: KSVASFQEDK YPPGKKFCSD ASPRGTSMRK FSPPFVPNAW RRLSMPVELK KARLDFSEEK DDEETGKWES EMTHERELRD DDYVSGDDGE NNEVLLRSNP
601: SSSGYDDYND DDEESSEEEG DNNKRAHVLD QTDYTGAEFY QSESDSPTSI EILPSERAMY YSEAGNMIYG QTSCKEDERF DSEVGQGSLF VEVDTIPIPG
701: PPGSFLPSPR DMGFDENLGN SSVITSQVQS SMDQLDRNSS ESPVSAVSNF AAGRLNFPAE LSSFRENFSP DIAMSYSTTP MSFCVPSHHG TITEAEPITI
801: DKTISPSRFR NNDQESCCCQ RKERISEGIT LNHQGSHLLQ RRAASSSNTM NLTNSPTRLD PNHPFEQSPY KTQQALDLQM SKFSSRKSLN AVVPPSPSNP
901: VLRLMGKDLM VMNQGEADEE ASRSSLTPNP QFVDPPCGGT GLYFNTGLYL RNSFDSTHQP QVQAQQQSQA AAFRNNFDHV RYFSPS
Arabidopsis Description
BEST Arabidopsis thaliana protein match is: hapless 8 (TAIR:AT5G56250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: /.../BLink). [Source:TAIR;Acc:AT5G56240]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.