Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- plastid 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36785 | Canola | nucleus | 53.08 | 87.76 |
| CDY36783 | Canola | cytosol | 10.53 | 84.87 |
| Bra002832.1-P | Field mustard | nucleus | 60.58 | 59.96 |
| Bra035610.1-P | Field mustard | nucleus, plastid | 57.35 | 57.41 |
| AT5G56240.3 | Thale cress | nucleus | 56.93 | 55.32 |
| Bra035611.1-P | Field mustard | nucleus, plastid | 30.34 | 39.92 |
| Bra028941.1-P | Field mustard | nucleus, plastid | 29.2 | 37.18 |
| Bra002831.1-P | Field mustard | nucleus | 21.27 | 34.0 |
| Solyc07g066200.2.1 | Tomato | nucleus | 24.92 | 17.84 |
| VIT_19s0015g01810.t01 | Wine grape | nucleus | 25.34 | 17.47 |
| GSMUA_Achr5P04160_001 | Banana | nucleus | 16.68 | 17.2 |
| PGSC0003DMT400056953 | Potato | nucleus | 24.5 | 16.85 |
| Os04t0471400-01 | Rice | nucleus | 21.38 | 16.55 |
| GSMUA_Achr10P... | Banana | nucleus | 18.77 | 16.41 |
| OQU81762 | Sorghum | nucleus | 20.75 | 16.1 |
| Zm00001d003333_P005 | Maize | nucleus | 20.54 | 15.9 |
| GSMUA_Achr10P... | Banana | nucleus | 18.46 | 15.68 |
| TraesCS2D01G332100.1 | Wheat | nucleus | 20.13 | 15.63 |
| Zm00001d025668_P005 | Maize | nucleus | 20.13 | 15.58 |
| TraesCS2A01G330900.1 | Wheat | nucleus | 20.02 | 15.53 |
| TraesCS2B01G351400.1 | Wheat | nucleus | 19.92 | 15.49 |
| GSMUA_Achr9P12690_001 | Banana | nucleus | 20.13 | 15.27 |
| GSMUA_Achr4P01620_001 | Banana | nucleus | 19.19 | 14.52 |
| GSMUA_Achr3P10940_001 | Banana | nucleus | 18.14 | 13.3 |
| GSMUA_Achr7P20270_001 | Banana | nucleus | 18.04 | 13.15 |
Protein Annotations
Description
AT5G56240 (E=2e-101) | INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: HAP8 (HAPLESS 8) (TAIR:AT5G56250.2); Has 259 Blast hits to 240 proteins in 69 species: Archae - 0; Bacteria - 13; Metazoa - 67; Fungi - 34; Plants - 31; Viruses - 0; Other Eukaryotes - 114 (source: NCBI BLink).
Coordinates
chrA03:+:5529112..5532393
Molecular Weight (calculated)
106044.0 Da
IEP (calculated)
8.527
GRAVY (calculated)
-0.796
Length
959 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLSTENPPH DPLSSSSPAT SSLLHLTTSS HELGQSHLQN FSIRDYAYSN RKNSIKNSWP FSPKSLQICS THGVTDPLPP FETTASSSSG KQIVSHVHRG
101: TGLAKLGLKG GCSQSRVIKN GFGTSTSVSK SKVEIVVAGT SNNNKNSKKC GRGGGGMVKS KEDTCGGGLV MTTTCPICKT FSSASNTTLN AHIDQCLSAD
201: SELPPVSTYK PNKHRVDQRL SVDSAVPPVS STKPNKPRVN QCLSVDLSVP PVSTKPNKPR AKPQMKVKTM VDIYASAKRC TLEDLDKRNG TTWVSILSHT
301: NRVVADKVSK KRKASPVGVG PVYIDAKGQK LRILTEFSEK KTCTTTTLRE QHEGGSSEKK SSSQGSKENS KSLRKRRLGK KHYKYLKLTN LKANNTSEVP
401: DYQRVFCGEG SSKGHRRIYN QRMLSKPGLV SKRLNEKGHK LYDLRDQPSE DDDDSWSGGE RLVLRGTDSS PLKKQKEVSG RNKAMFGSKG AQSRSFRVQM
501: SEKEEASLAV AHLDTLQVKK RLASIQENKY PLGKNVSEVS PRATSMRKVS PQFVANGWRR LSLPVELKKA RLDSSEEEEA GKWESEMTQE RELSDDDYVS
601: GYDDTPSFDD DDDEESSDEE DEDNSNNNNS RANVLDKSND ATPSERAMYY YSEEVEEMIY RQTTCDEDVR FESEVRGKGS LFVEVDTIPI PGPPGSFLPS
701: PRDMCYDENL GNSSVITSQF HSFDRNSSES PVSAVSNVAA GKLSFPVELS SSYTTTPMSF CVPSHHETIT EAELMTVGKT EPPPRLRSND HESCCCCQRK
801: ERISEGIALK HQTSHLLQRR GASYSSHLDT TNHPFEESPY MIQQDLELQS KFSSRAVVVP PSPNPVLRLM GKDLMVMNQG EADKVEASRD SLKPPTQFLD
901: SLHCPAGTGL YFNTGLYLRN SFESTHHQPQ TPQAQAQTQT QASPVRHSFD DHVRYFSPS
101: TGLAKLGLKG GCSQSRVIKN GFGTSTSVSK SKVEIVVAGT SNNNKNSKKC GRGGGGMVKS KEDTCGGGLV MTTTCPICKT FSSASNTTLN AHIDQCLSAD
201: SELPPVSTYK PNKHRVDQRL SVDSAVPPVS STKPNKPRVN QCLSVDLSVP PVSTKPNKPR AKPQMKVKTM VDIYASAKRC TLEDLDKRNG TTWVSILSHT
301: NRVVADKVSK KRKASPVGVG PVYIDAKGQK LRILTEFSEK KTCTTTTLRE QHEGGSSEKK SSSQGSKENS KSLRKRRLGK KHYKYLKLTN LKANNTSEVP
401: DYQRVFCGEG SSKGHRRIYN QRMLSKPGLV SKRLNEKGHK LYDLRDQPSE DDDDSWSGGE RLVLRGTDSS PLKKQKEVSG RNKAMFGSKG AQSRSFRVQM
501: SEKEEASLAV AHLDTLQVKK RLASIQENKY PLGKNVSEVS PRATSMRKVS PQFVANGWRR LSLPVELKKA RLDSSEEEEA GKWESEMTQE RELSDDDYVS
601: GYDDTPSFDD DDDEESSDEE DEDNSNNNNS RANVLDKSND ATPSERAMYY YSEEVEEMIY RQTTCDEDVR FESEVRGKGS LFVEVDTIPI PGPPGSFLPS
701: PRDMCYDENL GNSSVITSQF HSFDRNSSES PVSAVSNVAA GKLSFPVELS SSYTTTPMSF CVPSHHETIT EAELMTVGKT EPPPRLRSND HESCCCCQRK
801: ERISEGIALK HQTSHLLQRR GASYSSHLDT TNHPFEESPY MIQQDLELQS KFSSRAVVVP PSPNPVLRLM GKDLMVMNQG EADKVEASRD SLKPPTQFLD
901: SLHCPAGTGL YFNTGLYLRN SFESTHHQPQ TPQAQAQTQT QASPVRHSFD DHVRYFSPS
001: MFLSTENPPN DPLSSSSSPF LQHLTSSSHE LGQSHLSNFS IRDYAYSNRK NNIKNNWPFS SKSLQLFSTH GVTNPLPPFQ KFSTVSSKFE TTASPSSGKQ
101: IVSSYVHQGR DLDLAKLGLN QTVAETSSKG VCSQSRIIEN GLFPSTSVSK SEVEILVATT SNKKDNHSRK CGRGMVKSKE DSCAGLVTTS ESIMASKTCP
201: ICKTFSSASN TTLNAHIDQC LSVDSALLPP VVFSKPNKPR SKPPRVKVKT MVDIYASAKQ GTLEDLDRRN GTKWVSILSY SNRVVADKSE VSKKRKVSPV
301: GVGPVYIDAK GQKLRILSGF SEKKSSTTPL REQHEDGSSD KKCLGQGSKG TNKSLRKIRR GKKPHKFVKL TNHKADGPEQ IRGVQRGFSG EGSHMGHHRR
401: IYNQRMLAKR GLVSKKLNEK GHELSEDDED TWSGGDPTVL RGTDLSATDS YPLKKQKLGS EVAGRKKTLF RSQSAQSRSF RVPQSEKEDE SLEGVNINRL
501: KKSVASFQED KYPPGKKFCS DASPRGTSMR KFSPPFVPNA WRRLSMPVEL KKARLDFSEE KDDEETGKWE SEMTHERELR DDDYVSGDDG ENNEVLLRSN
601: PSSSGYDDYN DDDEESSEEE GDNNKRAHVL DQTDYTGAEF YQSESDSPTS IEILPSERAM YYSEAGNMIY GQTSCKEDER FDSEVGQGSL FVEVDTIPIP
701: GPPGSFLPSP RDMGFDENLG NSSVITSQVQ SSMDQLDRNS SESPVSAVSN FAAGRLNFPA ELSSFRENFS PDIAMSYSTT PMSFCVPSHH GTITEAEPIT
801: IDKTISPSRF RNNDQESCCC QRKERISEGI TLNHQGSHLL QRRAASSSNT MNLTNSPTRL DPNHPFEQSP YKTQQALDLQ MSKFSSRKSL NAVVPPSPSN
901: PVLRLMGKDL MVMNQGEADE EASRSSLTPN PQFVDPPCGG TGLYFNTGLY LRNSFDSTHQ PQVQAQQQSQ AAAFRNNFDH VRYFSPS
101: IVSSYVHQGR DLDLAKLGLN QTVAETSSKG VCSQSRIIEN GLFPSTSVSK SEVEILVATT SNKKDNHSRK CGRGMVKSKE DSCAGLVTTS ESIMASKTCP
201: ICKTFSSASN TTLNAHIDQC LSVDSALLPP VVFSKPNKPR SKPPRVKVKT MVDIYASAKQ GTLEDLDRRN GTKWVSILSY SNRVVADKSE VSKKRKVSPV
301: GVGPVYIDAK GQKLRILSGF SEKKSSTTPL REQHEDGSSD KKCLGQGSKG TNKSLRKIRR GKKPHKFVKL TNHKADGPEQ IRGVQRGFSG EGSHMGHHRR
401: IYNQRMLAKR GLVSKKLNEK GHELSEDDED TWSGGDPTVL RGTDLSATDS YPLKKQKLGS EVAGRKKTLF RSQSAQSRSF RVPQSEKEDE SLEGVNINRL
501: KKSVASFQED KYPPGKKFCS DASPRGTSMR KFSPPFVPNA WRRLSMPVEL KKARLDFSEE KDDEETGKWE SEMTHERELR DDDYVSGDDG ENNEVLLRSN
601: PSSSGYDDYN DDDEESSEEE GDNNKRAHVL DQTDYTGAEF YQSESDSPTS IEILPSERAM YYSEAGNMIY GQTSCKEDER FDSEVGQGSL FVEVDTIPIP
701: GPPGSFLPSP RDMGFDENLG NSSVITSQVQ SSMDQLDRNS SESPVSAVSN FAAGRLNFPA ELSSFRENFS PDIAMSYSTT PMSFCVPSHH GTITEAEPIT
801: IDKTISPSRF RNNDQESCCC QRKERISEGI TLNHQGSHLL QRRAASSSNT MNLTNSPTRL DPNHPFEQSP YKTQQALDLQ MSKFSSRKSL NAVVPPSPSN
901: PVLRLMGKDL MVMNQGEADE EASRSSLTPN PQFVDPPCGG TGLYFNTGLY LRNSFDSTHQ PQVQAQQQSQ AAAFRNNFDH VRYFSPS
Arabidopsis Description
BEST Arabidopsis thaliana protein match is: hapless 8 (TAIR:AT5G56250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: /.../BLink). [Source:TAIR;Acc:AT5G56240]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.