Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 3
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11951 | Canola | nucleus, plastid | 83.79 | 54.48 |
| Bra028942.1-P | Field mustard | nucleus | 87.76 | 53.08 |
| CDY06515 | Canola | nucleus, plastid | 61.03 | 39.16 |
| CDY32803 | Canola | nucleus | 63.28 | 38.63 |
| CDY17406 | Canola | nucleus, plastid | 61.38 | 38.16 |
| CDY65749 | Canola | nucleus | 55.17 | 36.28 |
| AT5G56240.3 | Thale cress | nucleus | 60.69 | 35.66 |
| CDY20740 | Canola | plastid | 36.03 | 28.28 |
| CDY06514 | Canola | nucleus, plastid | 33.45 | 28.16 |
| CDY62101 | Canola | nucleus | 31.03 | 26.32 |
| CDY36786 | Canola | nucleus, plastid | 33.45 | 25.76 |
| CDY11950 | Canola | nucleus | 32.41 | 24.74 |
| CDY32802 | Canola | nucleus | 22.93 | 22.17 |
| GSMUA_Achr5P04160_001 | Banana | nucleus | 22.76 | 14.19 |
| OQU81762 | Sorghum | nucleus | 26.03 | 12.22 |
| Zm00001d003333_P005 | Maize | nucleus | 26.03 | 12.19 |
| Zm00001d025668_P005 | Maize | nucleus | 25.86 | 12.11 |
| GSMUA_Achr10P... | Banana | nucleus | 22.76 | 12.03 |
| Os04t0471400-01 | Rice | nucleus | 25.69 | 12.03 |
| GSMUA_Achr10P... | Banana | nucleus | 22.59 | 11.6 |
| TraesCS2B01G351400.1 | Wheat | nucleus | 24.31 | 11.44 |
| TraesCS2D01G332100.1 | Wheat | nucleus | 24.31 | 11.42 |
| TraesCS2A01G330900.1 | Wheat | nucleus | 24.31 | 11.41 |
| Solyc07g066200.2.1 | Tomato | nucleus | 25.86 | 11.19 |
| VIT_19s0015g01810.t01 | Wine grape | nucleus | 25.86 | 10.78 |
| PGSC0003DMT400056953 | Potato | nucleus | 25.86 | 10.75 |
| GSMUA_Achr4P01620_001 | Banana | nucleus | 23.45 | 10.73 |
| GSMUA_Achr9P12690_001 | Banana | nucleus | 23.1 | 10.6 |
| GSMUA_Achr7P20270_001 | Banana | nucleus | 23.1 | 10.18 |
| GSMUA_Achr3P10940_001 | Banana | nucleus | 21.38 | 9.48 |
| CDY36783 | Canola | cytosol | 0.69 | 3.36 |
Protein Annotations
| EnsemblPlants:CDY36785 | EnsemblPlantsGene:GSBRNA2T00062617001 | PANTHER:PTHR35767 | PANTHER:PTHR35767:SF1 | ProteinID:CDY36785 | ProteinID:CDY36785.1 |
| SEG:seg | UniParc:UPI0004EE0570 | UniProt:A0A078HEJ9 | MapMan:35.2 | : | : |
Description
BnaA03g11010DBnaA03g11010D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HEJ9]
Coordinates
chrLK032383:-:245607..248904
Molecular Weight (calculated)
64410.1 Da
IEP (calculated)
10.471
GRAVY (calculated)
-0.726
Length
580 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLSTENPPH DPLSSSSPAT SSLLHLTTSS HELGQSHLQN FSIRDYAYSN RKNSIKNSWP FSPKSLQICS THGVTDPLPP FETTASSSSG KQIVSHVHRG
101: TGLAKLGLKG GCSQSRVIKN GFGTSTSVLK SKVEILVAGT SNNNKNSKKC GRVGGMVKSK EDTCGGGLVM TTTCPICKTF SSASNTTLNA HIDQCLIDQP
201: KPQMKVKTMV DIYASAKRCT LEDLDKRNGT TWVSILSHTN RVVADKVSKK RKASPVGVGP VYIDAKGQKL RILTEFSEKK TCTTTTLREQ HEGGSSEKKS
301: SSQGSKENSK SLRKRRLGKK HYKYLKLTNL KANNTSEVPD YQRVFCGEGS SKGHRRIYNQ RMLSKPGLVS KRLNEKGHKL YDLRDQPSED DDDSWSGGER
401: LVLRGTDSSP LKKQKEVSGR NKAMFGSKGA QSRSFRVQMS EKEEASLAVA HLDTLQVKKR LASIQENKYP LGKNVSEVSP RATSMRKVSP QFVANGWRRL
501: SLPVELKKAR LDSSEEEEAG KWESEMTQER ELSDDDYKVV MRRMKIIATT TTVEPMCWTK AMMLHLAREQ CIITLKKLRK
101: TGLAKLGLKG GCSQSRVIKN GFGTSTSVLK SKVEILVAGT SNNNKNSKKC GRVGGMVKSK EDTCGGGLVM TTTCPICKTF SSASNTTLNA HIDQCLIDQP
201: KPQMKVKTMV DIYASAKRCT LEDLDKRNGT TWVSILSHTN RVVADKVSKK RKASPVGVGP VYIDAKGQKL RILTEFSEKK TCTTTTLREQ HEGGSSEKKS
301: SSQGSKENSK SLRKRRLGKK HYKYLKLTNL KANNTSEVPD YQRVFCGEGS SKGHRRIYNQ RMLSKPGLVS KRLNEKGHKL YDLRDQPSED DDDSWSGGER
401: LVLRGTDSSP LKKQKEVSGR NKAMFGSKGA QSRSFRVQMS EKEEASLAVA HLDTLQVKKR LASIQENKYP LGKNVSEVSP RATSMRKVSP QFVANGWRRL
501: SLPVELKKAR LDSSEEEEAG KWESEMTQER ELSDDDYKVV MRRMKIIATT TTVEPMCWTK AMMLHLAREQ CIITLKKLRK
001: MFLSTENPPN DPLSSSSSPF LQHLTSSSHE LGQSHLSNFS IRDYAYSNRK NNIKNNWPFS SKSLQLFSTH GVTNPLPPFQ KFSTVSSKFE TTASPSSGKQ
101: IVSSYVHQGR DLDLAKLGLN QTVAETSSKG VCSQSRIIEN GLFPSTSVSK SEVEILVATT SNKKDNHSRK CGRGMVKSKE DSCAGLVTTS ESIMASKTCP
201: ICKTFSSASN TTLNAHIDQC LSVDSALLPP VVFSKPNKPR SKPPRVKVKT MVDIYASAKQ GTLEDLDRRN GTKWVSILSY SNRVVADKSE VSKKRKVSPV
301: GVGPVYIDAK GQKLRILSGF SEKKSSTTPL REQHEDGSSD KKCLGQGSKG TNKSLRKIRR GKKPHKFVKL TNHKADGPEI RGVQRGFSGE GSHMGHHRRI
401: YNQRMLAKRG LVSKKLNEKG HELSEDDEDT WSGGDPTVLR GTDLSATDSY PLKKQKLGSE VAGRKKTLFR SQSAQSRSFR VPQSEKEDES LEGVNINRLK
501: KSVASFQEDK YPPGKKFCSD ASPRGTSMRK FSPPFVPNAW RRLSMPVELK KARLDFSEEK DDEETGKWES EMTHERELRD DDYVSGDDGE NNEVLLRSNP
601: SSSGYDDYND DDEESSEEEG DNNKRAHVLD QTDYTGAEFY QSESDSPTSI EILPSERAMY YSEAGNMIYG QTSCKEDERF DSEVGQGSLF VEVDTIPIPG
701: PPGSFLPSPR DMGFDENLGN SSVITSQVQS SMDQLDRNSS ESPVSAVSNF AAGRLNFPAE LSSFRENFSP DIAMSYSTTP MSFCVPSHHG TITEAEPITI
801: DKTISPSRFR NNDQESCCCQ RKERISEGIT LNHQGSHLLQ RRAASSSNTM NLTNSPTRLD PNHPFEQSPY KTQQALDLQM SKFSSRKSLN AVVPPSPSNP
901: VLRLMGKDLM VMNQGEADEE ASRSSLTPNP QFVDPPCGGT GLYFNTGLYL RNSFDSTHQP QVQAQQQSQA AAFRNNFDHV RYFSPS
101: IVSSYVHQGR DLDLAKLGLN QTVAETSSKG VCSQSRIIEN GLFPSTSVSK SEVEILVATT SNKKDNHSRK CGRGMVKSKE DSCAGLVTTS ESIMASKTCP
201: ICKTFSSASN TTLNAHIDQC LSVDSALLPP VVFSKPNKPR SKPPRVKVKT MVDIYASAKQ GTLEDLDRRN GTKWVSILSY SNRVVADKSE VSKKRKVSPV
301: GVGPVYIDAK GQKLRILSGF SEKKSSTTPL REQHEDGSSD KKCLGQGSKG TNKSLRKIRR GKKPHKFVKL TNHKADGPEI RGVQRGFSGE GSHMGHHRRI
401: YNQRMLAKRG LVSKKLNEKG HELSEDDEDT WSGGDPTVLR GTDLSATDSY PLKKQKLGSE VAGRKKTLFR SQSAQSRSFR VPQSEKEDES LEGVNINRLK
501: KSVASFQEDK YPPGKKFCSD ASPRGTSMRK FSPPFVPNAW RRLSMPVELK KARLDFSEEK DDEETGKWES EMTHERELRD DDYVSGDDGE NNEVLLRSNP
601: SSSGYDDYND DDEESSEEEG DNNKRAHVLD QTDYTGAEFY QSESDSPTSI EILPSERAMY YSEAGNMIYG QTSCKEDERF DSEVGQGSLF VEVDTIPIPG
701: PPGSFLPSPR DMGFDENLGN SSVITSQVQS SMDQLDRNSS ESPVSAVSNF AAGRLNFPAE LSSFRENFSP DIAMSYSTTP MSFCVPSHHG TITEAEPITI
801: DKTISPSRFR NNDQESCCCQ RKERISEGIT LNHQGSHLLQ RRAASSSNTM NLTNSPTRLD PNHPFEQSPY KTQQALDLQM SKFSSRKSLN AVVPPSPSNP
901: VLRLMGKDLM VMNQGEADEE ASRSSLTPNP QFVDPPCGGT GLYFNTGLYL RNSFDSTHQP QVQAQQQSQA AAFRNNFDHV RYFSPS
Arabidopsis Description
BEST Arabidopsis thaliana protein match is: hapless 8 (TAIR:AT5G56250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: /.../BLink). [Source:TAIR;Acc:AT5G56240]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.