Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 4
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY65749 | Canola | nucleus | 79.76 | 81.75 |
| CDY36785 | Canola | nucleus | 39.16 | 61.03 |
| CDY11951 | Canola | nucleus, plastid | 58.63 | 59.42 |
| CDY32803 | Canola | nucleus | 62.17 | 59.16 |
| CDY17406 | Canola | nucleus, plastid | 59.4 | 57.56 |
| AT5G56240.3 | Thale cress | nucleus | 62.39 | 57.14 |
| CDY36783 | Canola | cytosol | 7.3 | 55.46 |
| CDY06514 | Canola | nucleus, plastid | 32.19 | 42.24 |
| CDY20740 | Canola | plastid | 34.51 | 42.22 |
| CDY11950 | Canola | nucleus | 32.08 | 38.16 |
| CDY36786 | Canola | nucleus, plastid | 31.75 | 38.11 |
| CDY62101 | Canola | nucleus | 28.65 | 37.87 |
| CDY32802 | Canola | nucleus | 22.46 | 33.83 |
| VIT_19s0015g01810.t01 | Wine grape | nucleus | 28.65 | 18.62 |
| Solyc07g066200.2.1 | Tomato | nucleus | 27.21 | 18.36 |
| GSMUA_Achr5P04160_001 | Banana | nucleus | 18.36 | 17.85 |
| PGSC0003DMT400056953 | Potato | nucleus | 27.21 | 17.63 |
| OQU81762 | Sorghum | nucleus | 23.34 | 17.07 |
| Os04t0471400-01 | Rice | nucleus | 23.23 | 16.95 |
| Zm00001d003333_P005 | Maize | nucleus | 23.01 | 16.79 |
| TraesCS2D01G332100.1 | Wheat | nucleus | 22.57 | 16.52 |
| TraesCS2B01G351400.1 | Wheat | nucleus | 22.46 | 16.46 |
| TraesCS2A01G330900.1 | Wheat | nucleus | 22.46 | 16.42 |
| Zm00001d025668_P005 | Maize | nucleus | 22.46 | 16.38 |
| GSMUA_Achr10P... | Banana | nucleus | 19.36 | 15.95 |
| GSMUA_Achr10P... | Banana | nucleus | 19.8 | 15.85 |
| GSMUA_Achr9P12690_001 | Banana | nucleus | 21.46 | 15.35 |
| GSMUA_Achr4P01620_001 | Banana | nucleus | 20.13 | 14.36 |
| GSMUA_Achr3P10940_001 | Banana | nucleus | 19.91 | 13.76 |
| GSMUA_Achr7P20270_001 | Banana | nucleus | 18.81 | 12.92 |
Protein Annotations
| EnsemblPlants:CDY06515 | EnsemblPlantsGene:GSBRNA2T00122625001 | PANTHER:PTHR35767 | PANTHER:PTHR35767:SF1 | ProteinID:CDY06515 | ProteinID:CDY06515.1 |
| SEG:seg | UniParc:UPI0004EE963B | MapMan:35.2 | : | : | : |
Description
BnaC02g12390D
Coordinates
chrLK031971:+:57990..62373
Molecular Weight (calculated)
100110.0 Da
IEP (calculated)
8.424
GRAVY (calculated)
-0.859
Length
904 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLSTENPPR DPLSSSSSSP SSNLLRLTTS SSHELGQSSF SIRDYAYSNR KNNIKNSWPF SPKSLQLCSS HGLTDPLPPF QKLSRLSNQF ETSSSGKQIV
101: SHVHQTIAET SKRVCSQSRI IENGLVTSRS VSKSKVEIVV AATSNNKSKK CGRGGGMVKS KEDSCGTTTE SVMASKTCPI CKTFSSASNT TLNAHIDQCL
201: SVDSSVPPVT VLPASSKPRV KPQVKVKTLV DIYATAKECT LEDLDRRNGT QWASVLSCTN RVAADKCEVS KKRKASPVGV GPVYIDAKGQ KLRILTEFSQ
301: KKILSREQHE DGSSEKKSSS QGSKENKKRG RRKKHGKCIK VTSHKANASE KVLEYQREGS SKGRRSIYNQ RMLAKRGLVS KKLNEKEHKL CALRDQPSDD
401: DDEDEWSGED RIVLRGATGS APLNKQKLRS QVSGRCKTMF ESKRAHSRSS RAQIEEKSLA GAYSNTVHSK KSLASIQEDK HPPGKNVRDA SPRATSMRNL
501: SPPFVANGWR RLSPPVEELK KSRFDLSDEE EEETGKWESE MTQERELSDD DDYVSGDDNP SFSRYYDYDD DEESSDEEEE DDSNSRANVL DKSNDANEII
601: PSERAMYYSE DMIYGQSGCD EEDVRFGSEV RGKGSLFVEV DTIPIPGPPG SFLPSPRGMG FDGNSSVITS QFQSSMDQLD RNSSESPVSA VSNFAAGRLN
701: FPAEFPSSLD IPMSFGVPSH HGTIPEAEPK SVDKATTPLS FRNNGHESCC CQRKERVSLN HEASHLLQRR AASSSSIAMS LTKSPTRLDP NHPFEYVHST
801: FSNRAVVPPS PSNSVLRLMG KDLMVMNQGD ADNKEEASRT SLKPSPQFHD HQPCDGNGLY FNTGLYLRNS FEPKHQQQTP VPQQQTQVSP FRNNFDHVRY
901: FSPS
101: SHVHQTIAET SKRVCSQSRI IENGLVTSRS VSKSKVEIVV AATSNNKSKK CGRGGGMVKS KEDSCGTTTE SVMASKTCPI CKTFSSASNT TLNAHIDQCL
201: SVDSSVPPVT VLPASSKPRV KPQVKVKTLV DIYATAKECT LEDLDRRNGT QWASVLSCTN RVAADKCEVS KKRKASPVGV GPVYIDAKGQ KLRILTEFSQ
301: KKILSREQHE DGSSEKKSSS QGSKENKKRG RRKKHGKCIK VTSHKANASE KVLEYQREGS SKGRRSIYNQ RMLAKRGLVS KKLNEKEHKL CALRDQPSDD
401: DDEDEWSGED RIVLRGATGS APLNKQKLRS QVSGRCKTMF ESKRAHSRSS RAQIEEKSLA GAYSNTVHSK KSLASIQEDK HPPGKNVRDA SPRATSMRNL
501: SPPFVANGWR RLSPPVEELK KSRFDLSDEE EEETGKWESE MTQERELSDD DDYVSGDDNP SFSRYYDYDD DEESSDEEEE DDSNSRANVL DKSNDANEII
601: PSERAMYYSE DMIYGQSGCD EEDVRFGSEV RGKGSLFVEV DTIPIPGPPG SFLPSPRGMG FDGNSSVITS QFQSSMDQLD RNSSESPVSA VSNFAAGRLN
701: FPAEFPSSLD IPMSFGVPSH HGTIPEAEPK SVDKATTPLS FRNNGHESCC CQRKERVSLN HEASHLLQRR AASSSSIAMS LTKSPTRLDP NHPFEYVHST
801: FSNRAVVPPS PSNSVLRLMG KDLMVMNQGD ADNKEEASRT SLKPSPQFHD HQPCDGNGLY FNTGLYLRNS FEPKHQQQTP VPQQQTQVSP FRNNFDHVRY
901: FSPS
001: MFLSTENPPN DPLSSSSSPF LQHLTSSSHE LGQSHLSNFS IRDYAYSNRK NNIKNNWPFS SKSLQLFSTH GVTNPLPPFQ KFSTVSSKFE TTASPSSGKQ
101: IVSSYVHQGR DLDLAKLGLN QTVAETSSKG VCSQSRIIEN GLFPSTSVSK SEVEILVATT SNKKDNHSRK CGRGMVKSKE DSCAGLVTTS ESIMASKTCP
201: ICKTFSSASN TTLNAHIDQC LSVDSALLPP VVFSKPNKPR SKPPRVKVKT MVDIYASAKQ GTLEDLDRRN GTKWVSILSY SNRVVADKSE VSKKRKVSPV
301: GVGPVYIDAK GQKLRILSGF SEKKSSTTPL REQHEDGSSD KKCLGQGSKG TNKSLRKIRR GKKPHKFVKL TNHKADGPEQ IRGVQRGFSG EGSHMGHHRR
401: IYNQRMLAKR GLVSKKLNEK GHELSEDDED TWSGGDPTVL RGTDLSATDS YPLKKQKLGS EVAGRKKTLF RSQSAQSRSF RVPQSEKEDE SLEGVNINRL
501: KKSVASFQED KYPPGKKFCS DASPRGTSMR KFSPPFVPNA WRRLSMPVEL KKARLDFSEE KDDEETGKWE SEMTHERELR DDDYVSGDDG ENNEVLLRSN
601: PSSSGYDDYN DDDEESSEEE GDNNKRAHVL DQTDYTGAEF YQSESDSPTS IEILPSERAM YYSEAGNMIY GQTSCKEDER FDSEVGQGSL FVEVDTIPIP
701: GPPGSFLPSP RDMGFDENLG NSSVITSQVQ SSMDQLDRNS SESPVSAVSN FAAGRLNFPA ELSSFRENFS PDIAMSYSTT PMSFCVPSHH GTITEAEPIT
801: IDKTISPSRF RNNDQESCCC QRKERISEGI TLNHQGSHLL QRRAASSSNT MNLTNSPTRL DPNHPFEQSP YKTQQALDLQ MSKFSSRKSL NAVVPPSPSN
901: PVLRLMGKDL MVMNQGEADE EASRSSLTPN PQFVDPPCGG TGLYFNTGLY LRNSFDSTHQ PQVQAQQQSQ AAAFRNNFDH VRYFSPS
101: IVSSYVHQGR DLDLAKLGLN QTVAETSSKG VCSQSRIIEN GLFPSTSVSK SEVEILVATT SNKKDNHSRK CGRGMVKSKE DSCAGLVTTS ESIMASKTCP
201: ICKTFSSASN TTLNAHIDQC LSVDSALLPP VVFSKPNKPR SKPPRVKVKT MVDIYASAKQ GTLEDLDRRN GTKWVSILSY SNRVVADKSE VSKKRKVSPV
301: GVGPVYIDAK GQKLRILSGF SEKKSSTTPL REQHEDGSSD KKCLGQGSKG TNKSLRKIRR GKKPHKFVKL TNHKADGPEQ IRGVQRGFSG EGSHMGHHRR
401: IYNQRMLAKR GLVSKKLNEK GHELSEDDED TWSGGDPTVL RGTDLSATDS YPLKKQKLGS EVAGRKKTLF RSQSAQSRSF RVPQSEKEDE SLEGVNINRL
501: KKSVASFQED KYPPGKKFCS DASPRGTSMR KFSPPFVPNA WRRLSMPVEL KKARLDFSEE KDDEETGKWE SEMTHERELR DDDYVSGDDG ENNEVLLRSN
601: PSSSGYDDYN DDDEESSEEE GDNNKRAHVL DQTDYTGAEF YQSESDSPTS IEILPSERAM YYSEAGNMIY GQTSCKEDER FDSEVGQGSL FVEVDTIPIP
701: GPPGSFLPSP RDMGFDENLG NSSVITSQVQ SSMDQLDRNS SESPVSAVSN FAAGRLNFPA ELSSFRENFS PDIAMSYSTT PMSFCVPSHH GTITEAEPIT
801: IDKTISPSRF RNNDQESCCC QRKERISEGI TLNHQGSHLL QRRAASSSNT MNLTNSPTRL DPNHPFEQSP YKTQQALDLQ MSKFSSRKSL NAVVPPSPSN
901: PVLRLMGKDL MVMNQGEADE EASRSSLTPN PQFVDPPCGG TGLYFNTGLY LRNSFDSTHQ PQVQAQQQSQ AAAFRNNFDH VRYFSPS
Arabidopsis Description
BEST Arabidopsis thaliana protein match is: hapless 8 (TAIR:AT5G56250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: /.../BLink). [Source:TAIR;Acc:AT5G56240]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.