Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 4
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY36785 | Canola | nucleus | 54.48 | 83.79 |
| CDY36783 | Canola | cytosol | 8.86 | 66.39 |
| CDY06515 | Canola | nucleus, plastid | 59.42 | 58.63 |
| CDY32803 | Canola | nucleus | 61.44 | 57.68 |
| CDY65749 | Canola | nucleus | 56.84 | 57.48 |
| CDY17406 | Canola | nucleus, plastid | 59.87 | 57.23 |
| AT5G56240.3 | Thale cress | nucleus | 60.09 | 54.31 |
| CDY06514 | Canola | nucleus, plastid | 31.95 | 41.36 |
| CDY20740 | Canola | plastid | 33.86 | 40.87 |
| CDY62101 | Canola | nucleus | 28.92 | 37.72 |
| CDY36786 | Canola | nucleus, plastid | 31.61 | 37.45 |
| CDY11950 | Canola | nucleus | 31.28 | 36.71 |
| CDY32802 | Canola | nucleus | 23.32 | 34.67 |
| Solyc07g066200.2.1 | Tomato | nucleus | 26.91 | 17.91 |
| GSMUA_Achr5P04160_001 | Banana | nucleus | 18.39 | 17.63 |
| VIT_19s0015g01810.t01 | Wine grape | nucleus | 26.57 | 17.04 |
| PGSC0003DMT400056953 | Potato | nucleus | 26.57 | 16.99 |
| GSMUA_Achr10P... | Banana | nucleus | 20.4 | 16.59 |
| Os04t0471400-01 | Rice | nucleus | 21.97 | 15.82 |
| OQU81762 | Sorghum | nucleus | 21.86 | 15.78 |
| GSMUA_Achr10P... | Banana | nucleus | 19.96 | 15.77 |
| Zm00001d003333_P005 | Maize | nucleus | 21.64 | 15.58 |
| Zm00001d025668_P005 | Maize | nucleus | 21.3 | 15.33 |
| TraesCS2D01G332100.1 | Wheat | nucleus | 21.08 | 15.22 |
| TraesCS2A01G330900.1 | Wheat | nucleus | 21.08 | 15.21 |
| TraesCS2B01G351400.1 | Wheat | nucleus | 20.96 | 15.17 |
| GSMUA_Achr9P12690_001 | Banana | nucleus | 21.19 | 14.95 |
| GSMUA_Achr4P01620_001 | Banana | nucleus | 20.63 | 14.52 |
| GSMUA_Achr3P10940_001 | Banana | nucleus | 19.62 | 13.38 |
| GSMUA_Achr7P20270_001 | Banana | nucleus | 18.5 | 12.54 |
Protein Annotations
| EnsemblPlants:CDY11951 | EnsemblPlantsGene:GSBRNA2T00060799001 | PANTHER:PTHR35767 | PANTHER:PTHR35767:SF1 | ProteinID:CDY11951 | ProteinID:CDY11951.1 |
| SEG:seg | UniParc:UPI0004EDAF71 | UniProt:A0A078FF93 | MapMan:35.2 | : | : |
Description
BnaC03g13770DBnaC03g13770D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FF93]
Coordinates
chrLK032015:+:592188..596287
Molecular Weight (calculated)
98919.3 Da
IEP (calculated)
8.091
GRAVY (calculated)
-0.837
Length
892 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLSTENPPH DPLSSSSPPS SFLHLTTSSH ELGQTHLQNF SIRDYAYSNR KNNIKNNWPF SPKSLQLCST HGVTDPLPPF ETTASSSSGK HIVSHVHIGS
101: GSAKLGLKGG CSQSRVIKNG YGTSTSVLKS KVETIVVAGT SNNNKNSKKC GRGGGMVKSK EDTCGGGLVM TTTCPICKTF SSASNTTLNA HIDQCLSLDS
201: ELPPVSSTKP NKPRVDSAVP PVSTKQNKLR AKPQMKVKTM VDIYASAKRC TLEDLDKRNG TTWASVLSHS NQVVADKTEV SKKRKVPPVG VGPVYIDAKG
301: QKLRILTEFS EKKTCITTPQ HEGGSSEKKS SSQGSKENSK SLRKRRLGKK HYKYLKLTNL KANNTSEVPE YQRVFCGEGN SKGHRRIYNQ RMLSKRGLVS
401: KRLNEKGHKL YDLRDQPSED EEDDDSWSGG ERLVLRGTDS SPFKKQKEVS GRNKAMFGSK GAQSRSFRVQ MSEKEETSLA VAHLDTLQLK KRLASIQENK
501: YPLGKNVSEV SHRATSMRKV SPPFVANGWR RLSLPVELKK ARLDSSEEEE AGKWESEMTK ERELSDDDYV SGYDDDDDEE SSDEEDEDNS NNNNSRANVL
601: DKSNDATPSE RAMYYYSEEV EEMIYEQTTC DEDVRFESEV RGKGSLFVEV DTIPIPGPPG SFLPSPRDMC FDENLGNSSV ITSQFHSFDR NSSESPVSNF
701: AAGKLSFCVP SHPETSTIDK TEPPPRLGSN DHESCCCCQR KDRISEGIAL NHQTSDLLQR RGAAYSSRLD TTNHPFEESP YMIQQDLDLQ SKFSSRAVVV
801: PPSPNPVLRL MGKDLMVMNQ GEADTVEASR DSLKPTTQFL DSHPCAGTGL YFNTGLYLRN GFEPTHHQPQ TQTQASPFRN SFDDHVRYFS PS
101: GSAKLGLKGG CSQSRVIKNG YGTSTSVLKS KVETIVVAGT SNNNKNSKKC GRGGGMVKSK EDTCGGGLVM TTTCPICKTF SSASNTTLNA HIDQCLSLDS
201: ELPPVSSTKP NKPRVDSAVP PVSTKQNKLR AKPQMKVKTM VDIYASAKRC TLEDLDKRNG TTWASVLSHS NQVVADKTEV SKKRKVPPVG VGPVYIDAKG
301: QKLRILTEFS EKKTCITTPQ HEGGSSEKKS SSQGSKENSK SLRKRRLGKK HYKYLKLTNL KANNTSEVPE YQRVFCGEGN SKGHRRIYNQ RMLSKRGLVS
401: KRLNEKGHKL YDLRDQPSED EEDDDSWSGG ERLVLRGTDS SPFKKQKEVS GRNKAMFGSK GAQSRSFRVQ MSEKEETSLA VAHLDTLQLK KRLASIQENK
501: YPLGKNVSEV SHRATSMRKV SPPFVANGWR RLSLPVELKK ARLDSSEEEE AGKWESEMTK ERELSDDDYV SGYDDDDDEE SSDEEDEDNS NNNNSRANVL
601: DKSNDATPSE RAMYYYSEEV EEMIYEQTTC DEDVRFESEV RGKGSLFVEV DTIPIPGPPG SFLPSPRDMC FDENLGNSSV ITSQFHSFDR NSSESPVSNF
701: AAGKLSFCVP SHPETSTIDK TEPPPRLGSN DHESCCCCQR KDRISEGIAL NHQTSDLLQR RGAAYSSRLD TTNHPFEESP YMIQQDLDLQ SKFSSRAVVV
801: PPSPNPVLRL MGKDLMVMNQ GEADTVEASR DSLKPTTQFL DSHPCAGTGL YFNTGLYLRN GFEPTHHQPQ TQTQASPFRN SFDDHVRYFS PS
001: MFLSTENPPN DPLSSSSSPF LQHLTSSSHE LGQSHLSNFS IRDYAYSNRK NNIKNNWPFS SKSLQLFSTH GVTNPLPPFQ KFSTVSSKFE TTASPSSGKQ
101: IVSSYVHQGR DLDLAKLGLN QTVAETSSKG VCSQSRIIEN GLFPSTSVSK SEVEILVATT SNKKDNHSRK CGRGMVKSKE DSCAGLVTTS ESIMASKTCP
201: ICKTFSSASN TTLNAHIDQC LSVDSALLPP VVFSKPNKPR SKPPRVKVKT MVDIYASAKQ GTLEDLDRRN GTKWVSILSY SNRVVADKSE VSKKRKVSPV
301: GVGPVYIDAK GQKLRILSGF SEKKSSTTPL REQHEDGSSD KKCLGQGSKG TNKSLRKIRR GKKPHKFVKL TNHKADGPEQ IRGVQRGFSG EGSHMGHHRR
401: IYNQRMLAKR GLVSKKLNEK GHELSEDDED TWSGGDPTVL RGTDLSATDS YPLKKQKLGS EVAGRKKTLF RSQSAQSRSF RVPQSEKEDE SLEGVNINRL
501: KKSVASFQED KYPPGKKFCS DASPRGTSMR KFSPPFVPNA WRRLSMPVEL KKARLDFSEE KDDEETGKWE SEMTHERELR DDDYVSGDDG ENNEVLLRSN
601: PSSSGYDDYN DDDEESSEEE GDNNKRAHVL DQTDYTGAEF YQSESDSPTS IEILPSERAM YYSEAGNMIY GQTSCKEDER FDSEVGQGSL FVEVDTIPIP
701: GPPGSFLPSP RDMGFDENLG NSSVITSQVQ SSMDQLDRNS SESPVSAVSN FAAGRLNFPA ELSSFRENFS PDIAMSYSTT PMSFCVPSHH GTITEAEPIT
801: IDKTISPSRF RNNDQESCCC QRKERISEGI TLNHQGSHLL QRRAASSSNT MNLTNSPTRL DPNHPFEQSP YKTQQALDLQ MSKFSSRKSL NAVVPPSPSN
901: PVLRLMGKDL MVMNQGEADE EASRSSLTPN PQFVDPPCGG TGLYFNTGLY LRNSFDSTHQ PQVQAQQQSQ AAAFRNNFDH VRYFSPS
101: IVSSYVHQGR DLDLAKLGLN QTVAETSSKG VCSQSRIIEN GLFPSTSVSK SEVEILVATT SNKKDNHSRK CGRGMVKSKE DSCAGLVTTS ESIMASKTCP
201: ICKTFSSASN TTLNAHIDQC LSVDSALLPP VVFSKPNKPR SKPPRVKVKT MVDIYASAKQ GTLEDLDRRN GTKWVSILSY SNRVVADKSE VSKKRKVSPV
301: GVGPVYIDAK GQKLRILSGF SEKKSSTTPL REQHEDGSSD KKCLGQGSKG TNKSLRKIRR GKKPHKFVKL TNHKADGPEQ IRGVQRGFSG EGSHMGHHRR
401: IYNQRMLAKR GLVSKKLNEK GHELSEDDED TWSGGDPTVL RGTDLSATDS YPLKKQKLGS EVAGRKKTLF RSQSAQSRSF RVPQSEKEDE SLEGVNINRL
501: KKSVASFQED KYPPGKKFCS DASPRGTSMR KFSPPFVPNA WRRLSMPVEL KKARLDFSEE KDDEETGKWE SEMTHERELR DDDYVSGDDG ENNEVLLRSN
601: PSSSGYDDYN DDDEESSEEE GDNNKRAHVL DQTDYTGAEF YQSESDSPTS IEILPSERAM YYSEAGNMIY GQTSCKEDER FDSEVGQGSL FVEVDTIPIP
701: GPPGSFLPSP RDMGFDENLG NSSVITSQVQ SSMDQLDRNS SESPVSAVSN FAAGRLNFPA ELSSFRENFS PDIAMSYSTT PMSFCVPSHH GTITEAEPIT
801: IDKTISPSRF RNNDQESCCC QRKERISEGI TLNHQGSHLL QRRAASSSNT MNLTNSPTRL DPNHPFEQSP YKTQQALDLQ MSKFSSRKSL NAVVPPSPSN
901: PVLRLMGKDL MVMNQGEADE EASRSSLTPN PQFVDPPCGG TGLYFNTGLY LRNSFDSTHQ PQVQAQQQSQ AAAFRNNFDH VRYFSPS
Arabidopsis Description
BEST Arabidopsis thaliana protein match is: hapless 8 (TAIR:AT5G56250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: /.../BLink). [Source:TAIR;Acc:AT5G56240]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.