Subcellular Localization
min:
: max
Winner_takes_all: nucleus, plastid
Predictor Summary:
Predictor Summary:
- nucleus 3
- plastid 4
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY32803 | Canola | nucleus | 89.6 | 88.0 |
| CDY36785 | Canola | nucleus | 38.16 | 61.38 |
| CDY11951 | Canola | nucleus, plastid | 57.23 | 59.87 |
| CDY06515 | Canola | nucleus, plastid | 57.56 | 59.4 |
| AT5G56240.3 | Thale cress | nucleus | 60.56 | 57.24 |
| CDY65749 | Canola | nucleus | 53.38 | 56.46 |
| CDY36783 | Canola | cytosol | 6.22 | 48.74 |
| CDY06514 | Canola | nucleus, plastid | 30.76 | 41.65 |
| CDY20740 | Canola | plastid | 31.83 | 40.19 |
| CDY36786 | Canola | nucleus, plastid | 31.08 | 38.51 |
| CDY11950 | Canola | nucleus | 30.98 | 38.03 |
| CDY62101 | Canola | nucleus | 26.69 | 36.4 |
| CDY32802 | Canola | nucleus | 21.22 | 33.0 |
| Solyc07g066200.2.1 | Tomato | nucleus | 27.01 | 18.81 |
| PGSC0003DMT400056953 | Potato | nucleus | 27.33 | 18.28 |
| GSMUA_Achr5P04160_001 | Banana | nucleus | 17.79 | 17.85 |
| VIT_19s0015g01810.t01 | Wine grape | nucleus | 25.19 | 16.89 |
| GSMUA_Achr10P... | Banana | nucleus | 19.51 | 16.59 |
| OQU81762 | Sorghum | nucleus | 21.86 | 16.5 |
| Os04t0471400-01 | Rice | nucleus | 21.86 | 16.46 |
| Zm00001d003333_P005 | Maize | nucleus | 21.54 | 16.22 |
| Zm00001d025668_P005 | Maize | nucleus | 21.22 | 15.98 |
| TraesCS2B01G351400.1 | Wheat | nucleus | 19.94 | 15.09 |
| TraesCS2A01G330900.1 | Wheat | nucleus | 19.94 | 15.05 |
| TraesCS2D01G332100.1 | Wheat | nucleus | 19.83 | 14.98 |
| GSMUA_Achr10P... | Banana | nucleus | 17.68 | 14.61 |
| GSMUA_Achr9P12690_001 | Banana | nucleus | 19.4 | 14.32 |
| GSMUA_Achr4P01620_001 | Banana | nucleus | 19.4 | 14.29 |
| GSMUA_Achr7P20270_001 | Banana | nucleus | 19.4 | 13.75 |
| GSMUA_Achr3P10940_001 | Banana | nucleus | 17.47 | 12.46 |
Protein Annotations
| EnsemblPlants:CDY17406 | EnsemblPlantsGene:GSBRNA2T00095522001 | PANTHER:PTHR35767 | PANTHER:PTHR35767:SF1 | ProteinID:CDY17406 | ProteinID:CDY17406.1 |
| SEG:seg | UniParc:UPI0004EE8AC3 | UniProt:A0A078FWQ3 | MapMan:35.2 | : | : |
Description
BnaA10g10400DBnaA10g10400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FWQ3]
Coordinates
chrLK032072:-:743036..746818
Molecular Weight (calculated)
103540.0 Da
IEP (calculated)
7.402
GRAVY (calculated)
-0.800
Length
933 amino acids
Sequence
(BLAST)
(BLAST)
001: MFLSTENTPH DHPLPSPSSS FVHLTSTSSH ELAQSHPQSF SIRDYAYNNR KNNINNNWPF SPKSLQLLST HGVTDPLPPF QITASSSSGK QIVSHVQRGR
101: HLAKLGLNQT IVKTRQGDCS QSKIVRNGLF RSTSVSKSKE GIVLVAATSN NHHKSKTCGG GMVKSKEATS CVGIESIMAS KTCPICKTFS SASNTTLNAH
201: IDQCISVDSP VISKPNKPRP RGKPLMKVKT MVDIYATAKE CTLEDLDKRN GTNWAVISSY TNRVVADKSE VSKKRKVAPV GVGPIYVDAK GQKLRILTEF
301: SEKKTSSTTT PLTKQHEDGS DENKSASQGS KENSKSSRKR RPGKKHHKYL KLNNSHKIKE SEQVQRGVSV KGSSTGHRRI FNQRMLAERG SSSKKLNEKE
401: NKLYALRDQP SDDDDDDDSW SGGDHVVLRG TDLSATGSSW NKTMFGSKRA QRVRMSEKQE TSLAGAHLNT VRLKKSLSSI QEDKYPPGKN VREVTDASPR
501: ATSLRKLLPP FVANGWRRLS LPLELKRARL DLSDEEEEET GRWESEMTQE RELSDDDYVS GDNGERNEVV RRSNPLTFSG YNEYEYEDDD DDDEESSEED
601: KTDEFYQSET PPSNETIPSE RAYLYNSEGV ENMVYEEDDD VRFDSEVGKG SLYVEVDTIP IPGPPGSFIP SPRGMSYDEH LGNSSVITSQ LQSSMDQPDR
701: HSSESPVSAF SNFAAGRLSF PAELFSMDVP SPYSTTPVSF PVPSHPEKMT VDKAITPPSF RNNDGEPCCC QRKERISESV TLNHQPYHLL QRRAAVSSSS
801: MAMNLTKPPT CLDPNLSFEQ SPPYMIQQEF DLHSKFSNKG NVNGAVVVPP SPSNSVLRLM GKDLMVMNQG EESLASLKPT PQFLDPPPLS AGAGLYLNTG
901: LYLRNSLEPT HQLETQASAF RNSFDHVRYF SQS
101: HLAKLGLNQT IVKTRQGDCS QSKIVRNGLF RSTSVSKSKE GIVLVAATSN NHHKSKTCGG GMVKSKEATS CVGIESIMAS KTCPICKTFS SASNTTLNAH
201: IDQCISVDSP VISKPNKPRP RGKPLMKVKT MVDIYATAKE CTLEDLDKRN GTNWAVISSY TNRVVADKSE VSKKRKVAPV GVGPIYVDAK GQKLRILTEF
301: SEKKTSSTTT PLTKQHEDGS DENKSASQGS KENSKSSRKR RPGKKHHKYL KLNNSHKIKE SEQVQRGVSV KGSSTGHRRI FNQRMLAERG SSSKKLNEKE
401: NKLYALRDQP SDDDDDDDSW SGGDHVVLRG TDLSATGSSW NKTMFGSKRA QRVRMSEKQE TSLAGAHLNT VRLKKSLSSI QEDKYPPGKN VREVTDASPR
501: ATSLRKLLPP FVANGWRRLS LPLELKRARL DLSDEEEEET GRWESEMTQE RELSDDDYVS GDNGERNEVV RRSNPLTFSG YNEYEYEDDD DDDEESSEED
601: KTDEFYQSET PPSNETIPSE RAYLYNSEGV ENMVYEEDDD VRFDSEVGKG SLYVEVDTIP IPGPPGSFIP SPRGMSYDEH LGNSSVITSQ LQSSMDQPDR
701: HSSESPVSAF SNFAAGRLSF PAELFSMDVP SPYSTTPVSF PVPSHPEKMT VDKAITPPSF RNNDGEPCCC QRKERISESV TLNHQPYHLL QRRAAVSSSS
801: MAMNLTKPPT CLDPNLSFEQ SPPYMIQQEF DLHSKFSNKG NVNGAVVVPP SPSNSVLRLM GKDLMVMNQG EESLASLKPT PQFLDPPPLS AGAGLYLNTG
901: LYLRNSLEPT HQLETQASAF RNSFDHVRYF SQS
001: MFLSTENPPN DPLSSSSSPF LQHLTSSSHE LGQSHLSNFS IRDYAYSNRK NNIKNNWPFS SKSLQLFSTH GVTNPLPPFQ KFSTVSSKFE TTASPSSGKQ
101: IVSSYVHQGR DLDLAKLGLN QTVAETSSKG VCSQSRIIEN GLFPSTSVSK SEVEILVATT SNKKDNHSRK CGRGMVKSKE DSCAGLVTTS ESIMASKTCP
201: ICKTFSSASN TTLNAHIDQC LSVDSALLPP VVFSKPNKPR SKPPRVKVKT MVDIYASAKQ GTLEDLDRRN GTKWVSILSY SNRVVADKSE VSKKRKVSPV
301: GVGPVYIDAK GQKLRILSGF SEKKSSTTPL REQHEDGSSD KKCLGQGSKG TNKSLRKIRR GKKPHKFVKL TNHKADGPEQ IRGVQRGFSG EGSHMGHHRR
401: IYNQRMLAKR GLVSKKLNEK GHELSEDDED TWSGGDPTVL RGTDLSATDS YPLKKQKLGS EVAGRKKTLF RSQSAQSRSF RVPQSEKEDE SLEGVNINRL
501: KKSVASFQED KYPPGKKFCS DASPRGTSMR KFSPPFVPNA WRRLSMPVEL KKARLDFSEE KDDEETGKWE SEMTHERELR DDDYVSGDDG ENNEVLLRSN
601: PSSSGYDDYN DDDEESSEEE GDNNKRAHVL DQTDYTGAEF YQSESDSPTS IEILPSERAM YYSEAGNMIY GQTSCKEDER FDSEVGQGSL FVEVDTIPIP
701: GPPGSFLPSP RDMGFDENLG NSSVITSQVQ SSMDQLDRNS SESPVSAVSN FAAGRLNFPA ELSSFRENFS PDIAMSYSTT PMSFCVPSHH GTITEAEPIT
801: IDKTISPSRF RNNDQESCCC QRKERISEGI TLNHQGSHLL QRRAASSSNT MNLTNSPTRL DPNHPFEQSP YKTQQALDLQ MSKFSSRKSL NAVVPPSPSN
901: PVLRLMGKDL MVMNQGEADE EASRSSLTPN PQFVDPPCGG TGLYFNTGLY LRNSFDSTHQ PQVQAQQQSQ AAAFRNNFDH VRYFSPS
101: IVSSYVHQGR DLDLAKLGLN QTVAETSSKG VCSQSRIIEN GLFPSTSVSK SEVEILVATT SNKKDNHSRK CGRGMVKSKE DSCAGLVTTS ESIMASKTCP
201: ICKTFSSASN TTLNAHIDQC LSVDSALLPP VVFSKPNKPR SKPPRVKVKT MVDIYASAKQ GTLEDLDRRN GTKWVSILSY SNRVVADKSE VSKKRKVSPV
301: GVGPVYIDAK GQKLRILSGF SEKKSSTTPL REQHEDGSSD KKCLGQGSKG TNKSLRKIRR GKKPHKFVKL TNHKADGPEQ IRGVQRGFSG EGSHMGHHRR
401: IYNQRMLAKR GLVSKKLNEK GHELSEDDED TWSGGDPTVL RGTDLSATDS YPLKKQKLGS EVAGRKKTLF RSQSAQSRSF RVPQSEKEDE SLEGVNINRL
501: KKSVASFQED KYPPGKKFCS DASPRGTSMR KFSPPFVPNA WRRLSMPVEL KKARLDFSEE KDDEETGKWE SEMTHERELR DDDYVSGDDG ENNEVLLRSN
601: PSSSGYDDYN DDDEESSEEE GDNNKRAHVL DQTDYTGAEF YQSESDSPTS IEILPSERAM YYSEAGNMIY GQTSCKEDER FDSEVGQGSL FVEVDTIPIP
701: GPPGSFLPSP RDMGFDENLG NSSVITSQVQ SSMDQLDRNS SESPVSAVSN FAAGRLNFPA ELSSFRENFS PDIAMSYSTT PMSFCVPSHH GTITEAEPIT
801: IDKTISPSRF RNNDQESCCC QRKERISEGI TLNHQGSHLL QRRAASSSNT MNLTNSPTRL DPNHPFEQSP YKTQQALDLQ MSKFSSRKSL NAVVPPSPSN
901: PVLRLMGKDL MVMNQGEADE EASRSSLTPN PQFVDPPCGG TGLYFNTGLY LRNSFDSTHQ PQVQAQQQSQ AAAFRNNFDH VRYFSPS
Arabidopsis Description
BEST Arabidopsis thaliana protein match is: hapless 8 (TAIR:AT5G56250.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: /.../BLink). [Source:TAIR;Acc:AT5G56240]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.