Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G287700.1 | Wheat | nucleus | 93.58 | 95.63 |
| TraesCS3B01G322600.5 | Wheat | mitochondrion | 88.39 | 87.59 |
| OQU84317 | Sorghum | nucleus | 51.34 | 53.67 |
| KRH38611 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 4.89 | 52.46 |
| Zm00001d053989_P003 | Maize | plastid | 52.41 | 52.29 |
| Os12t0209700-01 | Rice | nucleus | 22.23 | 51.78 |
| CDX90783 | Canola | nucleus | 28.19 | 32.17 |
| AT4G10930.1 | Thale cress | nucleus | 29.03 | 32.12 |
| GSMUA_Achr3P31620_001 | Banana | nucleus | 32.54 | 31.98 |
| CDY05126 | Canola | nucleus | 27.81 | 31.93 |
| Solyc12g055910.1.1 | Tomato | nucleus | 29.79 | 31.86 |
| VIT_02s0025g01650.t01 | Wine grape | nucleus | 30.4 | 31.05 |
| KRH60053 | Soybean | nucleus | 30.71 | 30.76 |
| Bra000729.1-P | Field mustard | nucleus | 27.81 | 30.74 |
| KRH41328 | Soybean | nucleus | 29.87 | 30.22 |
| TraesCS7A01G212900.1 | Wheat | nucleus | 8.86 | 12.26 |
| TraesCS4A01G117900.1 | Wheat | nucleus | 5.12 | 7.69 |
| TraesCS2A01G094000.1 | Wheat | nucleus | 6.65 | 7.04 |
Protein Annotations
| Gene3D:3.30.40.10 | MapMan:35.1 | InterPro:EloA-BP1 | InterPro:IPR001841 | InterPro:IPR013083 | InterPro:IPR019787 |
| PFAM:PF00628 | PFAM:PF13639 | PFAM:PF15870 | ScanProsite:PS00518 | PFscan:PS50016 | PFscan:PS50089 |
| PANTHER:PTHR22937 | PANTHER:PTHR22937:SF76 | SMART:SM00184 | SMART:SM00249 | SUPFAM:SSF57850 | SUPFAM:SSF57903 |
| EnsemblPlantsGene:TraesCS3A01G287900 | EnsemblPlants:TraesCS3A01G287900.3 | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING |
| InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_RING_CS | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr3A:-:516120659..516127413
Molecular Weight (calculated)
142802.0 Da
IEP (calculated)
4.991
GRAVY (calculated)
-0.692
Length
1309 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPMQMDVDGQ PTEALEEMDN LVLRPFDSVL VENYTSENEI CGICRDIVID RGVLDGCQHW FCYTCIDNWS AITNRCPLCK IEFQNITSTP VYDSTGTGDT
0101: IEDDYPLTSG DDDWYDPGES NTLSFPSYYI DAEAVVCLDG GDCIIRSGLV AAEDNSALDT SIACDSCDLW YHAICVGFNP ETTSEDSWLC PRCVSIEAKN
0201: ESEVVLKQNV NGDSDRTSTD ASFSGRVSVS VADDGETALV VSMVGVNSES KDDLLEGSLG SETAQEAFYC NSHPSYSIDD LSHEAVANAC IPRNKDISCS
0301: SHNKSSETNL ARTVSSEPTQ RSSELSAMRE SACILFSAEH GNILNEQSEV PQDGLSYSLL CRSKEAESTG EDAALPRNSN GKSPVIKSAQ LSSAASKVAR
0401: SADVDMINSD AVQKRKNDQN TQLPPMEDRQ NASDMESGDE ISHPAKKAKL GVPDQEMYLI ANSGVSSSDC HATSIAAEVI ASDTSKIATQ NKYVPDIMSI
0501: VEGESYMRDP GRELAKPVGR RAGDKPGLRM KKILHKDGKE STAVVQKLQQ EIREVVRDNG ISILKKDNAF DEKLLTAFRS AIGKSMDGPA KKPNLSLARK
0601: SLLQKGKIRE NLTKKLYASS TGRRRSAWHR DREVDFWKHR CSPGINPEKI ETLQSVLQLL KKSSGTGTRK ESAEEKKAFL SRLYLADASV VPRKGDIKPL
0701: SALEGSLPFD KNSQIKGDDG KSTNKPAPVT QTIKINSPNS TGKVSSSSTL SKEALSRREN KNGQAPQNKQ NQSAGDIKQD KRKWALEILA RKNASSIGSK
0801: DQTEGTDDLS RNYPLLAKLP VDMRPQLTTG RHNKVPMSVR QAQLYRIAEY YLQRANLDVI RRCADTELAI ADAVNVENDI YGKSSSKSVY VNLCSQATRQ
0901: SAKPKPENDA STLTEKAEVS SDLISQQVTT ENTNSGSSNV EEALDRAGLL DIPATAGQTD KSELAGVLEQ NASENTVCFN SVEEVLKRAG LFDSPPNSPE
1001: RKSTTAEGNS RTVSGSPIST QQKYTNTDDT YLVNLDSEPS RSLQSSSDSR VRDASPLKDE DDSSVQVLDD ANCQNLDQRP SYQQPKCNSE DDQKLIPSGE
1101: TTDVTANETL SVNLAEVDKC SLQCEKTSQT DKETVADIPD EVTGHVENSK EVDITVSDLH NKSSHGNNVP KEGEGIRQAV KLEPGKEKSS SGNQELNRKH
1201: SKADKSSTHP AESVDSLKKP APDPGNNSAS DSSSSVHKKV EMFVKENIRP LCKSGVITVE QYRWAVAKTA EKVMKHHSEA KNANFLIKEG DKVKKLALQY
1301: VEAAQQKIS
0101: IEDDYPLTSG DDDWYDPGES NTLSFPSYYI DAEAVVCLDG GDCIIRSGLV AAEDNSALDT SIACDSCDLW YHAICVGFNP ETTSEDSWLC PRCVSIEAKN
0201: ESEVVLKQNV NGDSDRTSTD ASFSGRVSVS VADDGETALV VSMVGVNSES KDDLLEGSLG SETAQEAFYC NSHPSYSIDD LSHEAVANAC IPRNKDISCS
0301: SHNKSSETNL ARTVSSEPTQ RSSELSAMRE SACILFSAEH GNILNEQSEV PQDGLSYSLL CRSKEAESTG EDAALPRNSN GKSPVIKSAQ LSSAASKVAR
0401: SADVDMINSD AVQKRKNDQN TQLPPMEDRQ NASDMESGDE ISHPAKKAKL GVPDQEMYLI ANSGVSSSDC HATSIAAEVI ASDTSKIATQ NKYVPDIMSI
0501: VEGESYMRDP GRELAKPVGR RAGDKPGLRM KKILHKDGKE STAVVQKLQQ EIREVVRDNG ISILKKDNAF DEKLLTAFRS AIGKSMDGPA KKPNLSLARK
0601: SLLQKGKIRE NLTKKLYASS TGRRRSAWHR DREVDFWKHR CSPGINPEKI ETLQSVLQLL KKSSGTGTRK ESAEEKKAFL SRLYLADASV VPRKGDIKPL
0701: SALEGSLPFD KNSQIKGDDG KSTNKPAPVT QTIKINSPNS TGKVSSSSTL SKEALSRREN KNGQAPQNKQ NQSAGDIKQD KRKWALEILA RKNASSIGSK
0801: DQTEGTDDLS RNYPLLAKLP VDMRPQLTTG RHNKVPMSVR QAQLYRIAEY YLQRANLDVI RRCADTELAI ADAVNVENDI YGKSSSKSVY VNLCSQATRQ
0901: SAKPKPENDA STLTEKAEVS SDLISQQVTT ENTNSGSSNV EEALDRAGLL DIPATAGQTD KSELAGVLEQ NASENTVCFN SVEEVLKRAG LFDSPPNSPE
1001: RKSTTAEGNS RTVSGSPIST QQKYTNTDDT YLVNLDSEPS RSLQSSSDSR VRDASPLKDE DDSSVQVLDD ANCQNLDQRP SYQQPKCNSE DDQKLIPSGE
1101: TTDVTANETL SVNLAEVDKC SLQCEKTSQT DKETVADIPD EVTGHVENSK EVDITVSDLH NKSSHGNNVP KEGEGIRQAV KLEPGKEKSS SGNQELNRKH
1201: SKADKSSTHP AESVDSLKKP APDPGNNSAS DSSSSVHKKV EMFVKENIRP LCKSGVITVE QYRWAVAKTA EKVMKHHSEA KNANFLIKEG DKVKKLALQY
1301: VEAAQQKIS
0001: MELDFDASNL VEDEAVEVEH NGMTEIEGER CGICMDIIID RGVLDCCQHW FCFECIDNWS TIMNLCPLCQ REFQLITCVP VFDSGESSKV DEDLVSGDED
0101: CCIEEETDVV SSPSHYIDDT HYIDENAVVC LDGDLCKIRN TFSYIEGDSN LDTSIACDSC DMWYHAICVG FDVENASEDT WVCPRCLSNE KPHEPDTSPM
0201: ETQPDTSLME TRKSLDISEK TNSGCSVEAV YSGNFSVTVA DDGETALVVS IVKGDESHMG PSDTNPLPVQ AKMDGDPDSS HLKILCREEN TEQVAVKSEL
0301: NQSLPHDISS RLSSDSDQPF FAADIENRAD PVVEKDCLSI DDKKNLSTAA ISNSDVASVI SLKRKHSDCS GDDGNSETKP EIYESLNELK LEEEEELTTV
0401: HHESRSPSNN TTVDIFSIVK GTGRRKNLMR SNPTDKSSEA ENAAGLRVKK IKRTPEDEKE SMVLVEKLRK EIREAVRNKS MEDIRENQFD PKLLAAFRAA
0501: VAGPKTGEAP RRSSALAVKA KKLMLQKGKV RENLTKKIYA DLNGKRKSAW HRDCEVEFWK HRCIQGRKPE KIETLKSVLS LLKNKPADTK TNFSSETPQA
0601: SNPILSRLYL ADTSVFPRND NLKPLLAPKE MGNSQNNGKP TEASKTLPKI SAAKGSSVKA AGSKLNSGNK QSDGQPNLTS SNSKEMVENP DDLKKDKRKW
0701: ALQVLARKKA LAGNNSTQDK EGSPELKGNY PLLAQLPADM RPSLATSRHN KVPVAVRQTQ LYRLTEHLLK KENLLTIRRS AATELAVADA INIEKAIADK
0801: SSSKVVYLNL CSQEILHHSE SKTMDNAVEP NSSSPMADSE SERISSKDSD NPAVLEALRA AGLADSPPNS PTRSVEVLPE KGDSSLDKTR ETGPYNVFDM
0901: DSVPDTDIFG DFEYELDEED YFGATMAKKA SVMQPDESLT KVKVVLSTVQ PGKSLNPSEV VEDEETTTEN LNETTNGKED GKSFVPMELV PEAEGEGEGE
1001: GEGEGEGEGG GEILSVAECE ELYGPGTEKL VERPLIEGFA ENGVKAKAPD SECESNTQRE FIASNFEITC IQEKKLPRSI QKCKPSEKPS KEEKGKADGF
1101: GNSITKKVEA YIKEHIRPLC KSGVINVEQY RWAVTKTTEK VMKYHSKAKS ANFLIKEGDK IKKLAEQYVE TASSGAHHKD KCK
0101: CCIEEETDVV SSPSHYIDDT HYIDENAVVC LDGDLCKIRN TFSYIEGDSN LDTSIACDSC DMWYHAICVG FDVENASEDT WVCPRCLSNE KPHEPDTSPM
0201: ETQPDTSLME TRKSLDISEK TNSGCSVEAV YSGNFSVTVA DDGETALVVS IVKGDESHMG PSDTNPLPVQ AKMDGDPDSS HLKILCREEN TEQVAVKSEL
0301: NQSLPHDISS RLSSDSDQPF FAADIENRAD PVVEKDCLSI DDKKNLSTAA ISNSDVASVI SLKRKHSDCS GDDGNSETKP EIYESLNELK LEEEEELTTV
0401: HHESRSPSNN TTVDIFSIVK GTGRRKNLMR SNPTDKSSEA ENAAGLRVKK IKRTPEDEKE SMVLVEKLRK EIREAVRNKS MEDIRENQFD PKLLAAFRAA
0501: VAGPKTGEAP RRSSALAVKA KKLMLQKGKV RENLTKKIYA DLNGKRKSAW HRDCEVEFWK HRCIQGRKPE KIETLKSVLS LLKNKPADTK TNFSSETPQA
0601: SNPILSRLYL ADTSVFPRND NLKPLLAPKE MGNSQNNGKP TEASKTLPKI SAAKGSSVKA AGSKLNSGNK QSDGQPNLTS SNSKEMVENP DDLKKDKRKW
0701: ALQVLARKKA LAGNNSTQDK EGSPELKGNY PLLAQLPADM RPSLATSRHN KVPVAVRQTQ LYRLTEHLLK KENLLTIRRS AATELAVADA INIEKAIADK
0801: SSSKVVYLNL CSQEILHHSE SKTMDNAVEP NSSSPMADSE SERISSKDSD NPAVLEALRA AGLADSPPNS PTRSVEVLPE KGDSSLDKTR ETGPYNVFDM
0901: DSVPDTDIFG DFEYELDEED YFGATMAKKA SVMQPDESLT KVKVVLSTVQ PGKSLNPSEV VEDEETTTEN LNETTNGKED GKSFVPMELV PEAEGEGEGE
1001: GEGEGEGEGG GEILSVAECE ELYGPGTEKL VERPLIEGFA ENGVKAKAPD SECESNTQRE FIASNFEITC IQEKKLPRSI QKCKPSEKPS KEEKGKADGF
1101: GNSITKKVEA YIKEHIRPLC KSGVINVEQY RWAVTKTTEK VMKYHSKAKS ANFLIKEGDK IKKLAEQYVE TASSGAHHKD KCK
Arabidopsis Description
unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plant /.../37; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT4G10930]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.