Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- plastid 2
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G287700.1 | Wheat | nucleus | 52.49 | 23.03 |
| TraesCS3A01G287900.3 | Wheat | nucleus | 51.78 | 22.23 |
| TraesCS3B01G322600.5 | Wheat | mitochondrion | 51.96 | 22.1 |
| OQU84317 | Sorghum | nucleus | 45.55 | 20.45 |
| Zm00001d053989_P003 | Maize | plastid | 45.55 | 19.51 |
| GSMUA_Achr3P31620_001 | Banana | nucleus | 36.3 | 15.32 |
| CDY05126 | Canola | nucleus | 30.61 | 15.09 |
| CDX90783 | Canola | nucleus | 30.78 | 15.08 |
| AT4G10930.1 | Thale cress | nucleus | 30.96 | 14.71 |
| Bra000729.1-P | Field mustard | nucleus | 30.78 | 14.61 |
| KRH41328 | Soybean | nucleus | 30.78 | 13.37 |
| VIT_02s0025g01650.t01 | Wine grape | nucleus | 30.43 | 13.34 |
| Solyc12g055910.1.1 | Tomato | nucleus | 28.83 | 13.24 |
| KRH60053 | Soybean | nucleus | 30.61 | 13.16 |
| Os06t0283300-01 | Rice | plasma membrane | 3.74 | 4.84 |
| Os06t0283200-01 | Rice | nucleus | 6.05 | 4.46 |
| Os03t0302200-01 | Rice | nucleus | 3.74 | 2.63 |
| KRH38611 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 0.53 | 2.46 |
| Os07t0690300-01 | Rice | nucleus | 0.89 | 0.95 |
Protein Annotations
| EnsemblPlants:Os12t0209700-01 | EnsemblPlantsGene:Os12g0209700 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 | InterPro:EloA-BP1 |
| PANTHER:PTHR22937 | PANTHER:PTHR22937:SF76 | PFAM:PF15870 | ProteinID:BAT16311.1 | SEG:seg | UniParc:UPI000393B3D8 |
| UniProt:A0A0P0Y808 | MapMan:35.1 | : | : | : | : |
Description
RING finger proteinHypothetical conserved gene. (Os12t0209700-01)
Coordinates
chr12:+:5736998..5739519
Molecular Weight (calculated)
61114.9 Da
IEP (calculated)
6.465
GRAVY (calculated)
-0.858
Length
562 amino acids
Sequence
(BLAST)
(BLAST)
001: KPTPGTETTK ISSPNSTGKV LSSSIISKEA SSRRENKNSQ AAPNQQNQSA GDIKHDKRKW ALEVLARKNA ISITSKDKSE VADDLKGNYP LLAQLPVDMR
101: PQLTTGRHNK VPLSVRQAQL YRIVEHYLQK ANLSVIRRCA DTELAIADAV NVEKDISERS SSKSVYVNLC SQATRQPAKG KSENDASDLI EKSESENGPL
201: PQQVQTENTD ICNIDTEESL NRTGHSDLRA SPRQTIKGET GGDLVPEKTV GFSNVEEALK MAGLLDSPPN SPERKNTIIE GGCIVDTDSE PSKKLQSTSD
301: SIVRDISSHK DADDSSMLID LHDENGQNLH TVTSSQQSKH TGDEHQKLIL GEESTDVTAN KIVSVNLDEA GCSAEHGNSN GSNKEIPADT NMPDEGAGHV
401: GGAKEVKVPA SDLCNHSCQA NSSPTEGKKD SKIPILDSTE DRSCSNNAEL NNRLPNRNKL STDPAQSGDD SKKSARDPDN HKPDSSGSIH KKVEMFVKEN
501: IRPLCKSGVI TVEQYRWAVA KTTDKVMKYH SDAKNANFLI KEGDKVKKLA LQYVEAAQQK VT
101: PQLTTGRHNK VPLSVRQAQL YRIVEHYLQK ANLSVIRRCA DTELAIADAV NVEKDISERS SSKSVYVNLC SQATRQPAKG KSENDASDLI EKSESENGPL
201: PQQVQTENTD ICNIDTEESL NRTGHSDLRA SPRQTIKGET GGDLVPEKTV GFSNVEEALK MAGLLDSPPN SPERKNTIIE GGCIVDTDSE PSKKLQSTSD
301: SIVRDISSHK DADDSSMLID LHDENGQNLH TVTSSQQSKH TGDEHQKLIL GEESTDVTAN KIVSVNLDEA GCSAEHGNSN GSNKEIPADT NMPDEGAGHV
401: GGAKEVKVPA SDLCNHSCQA NSSPTEGKKD SKIPILDSTE DRSCSNNAEL NNRLPNRNKL STDPAQSGDD SKKSARDPDN HKPDSSGSIH KKVEMFVKEN
501: IRPLCKSGVI TVEQYRWAVA KTTDKVMKYH SDAKNANFLI KEGDKVKKLA LQYVEAAQQK VT
0001: MELDFDASNL VEDEAVEVEH NGMTEIEGER CGICMDIIID RGVLDCCQHW FCFECIDNWS TIMNLCPLCQ REFQLITCVP VFDSGESSKV DEDLVSGDED
0101: CCIEEETDVV SSPSHYIDDT HYIDENAVVC LDGDLCKIRN TFSYIEGDSN LDTSIACDSC DMWYHAICVG FDVENASEDT WVCPRCLSNE KPHEPDTSPM
0201: ETQPDTSLME TRKSLDISEK TNSGCSVEAV YSGNFSVTVA DDGETALVVS IVKGDESHMG PSDTNPLPVQ AKMDGDPDSS HLKILCREEN TEQVAVKSEL
0301: NQSLPHDISS RLSSDSDQPF FAADIENRAD PVVEKDCLSI DDKKNLSTAA ISNSDVASVI SLKRKHSDCS GDDGNSETKP EIYESLNELK LEEEEELTTV
0401: HHESRSPSNN TTVDIFSIVK GTGRRKNLMR SNPTDKSSEA ENAAGLRVKK IKRTPEDEKE SMVLVEKLRK EIREAVRNKS MEDIRENQFD PKLLAAFRAA
0501: VAGPKTGEAP RRSSALAVKA KKLMLQKGKV RENLTKKIYA DLNGKRKSAW HRDCEVEFWK HRCIQGRKPE KIETLKSVLS LLKNKPADTK TNFSSETPQA
0601: SNPILSRLYL ADTSVFPRND NLKPLLAPKE MGNSQNNGKP TEASKTLPKI SAAKGSSVKA AGSKLNSGNK QSDGQPNLTS SNSKEMVENP DDLKKDKRKW
0701: ALQVLARKKA LAGNNSTQDK EGSPELKGNY PLLAQLPADM RPSLATSRHN KVPVAVRQTQ LYRLTEHLLK KENLLTIRRS AATELAVADA INIEKAIADK
0801: SSSKVVYLNL CSQEILHHSE SKTMDNAVEP NSSSPMADSE SERISSKDSD NPAVLEALRA AGLADSPPNS PTRSVEVLPE KGDSSLDKTR ETGPYNVFDM
0901: DSVPDTDIFG DFEYELDEED YFGATMAKKA SVMQPDESLT KVKVVLSTVQ PGKSLNPSEV VEDEETTTEN LNETTNGKED GKSFVPMELV PEAEGEGEGE
1001: GEGEGEGEGG GEILSVAECE ELYGPGTEKL VERPLIEGFA ENGVKAKAPD SECESNTQRE FIASNFEITC IQEKKLPRSI QKCKPSEKPS KEEKGKADGF
1101: GNSITKKVEA YIKEHIRPLC KSGVINVEQY RWAVTKTTEK VMKYHSKAKS ANFLIKEGDK IKKLAEQYVE TASSGAHHKD KCK
0101: CCIEEETDVV SSPSHYIDDT HYIDENAVVC LDGDLCKIRN TFSYIEGDSN LDTSIACDSC DMWYHAICVG FDVENASEDT WVCPRCLSNE KPHEPDTSPM
0201: ETQPDTSLME TRKSLDISEK TNSGCSVEAV YSGNFSVTVA DDGETALVVS IVKGDESHMG PSDTNPLPVQ AKMDGDPDSS HLKILCREEN TEQVAVKSEL
0301: NQSLPHDISS RLSSDSDQPF FAADIENRAD PVVEKDCLSI DDKKNLSTAA ISNSDVASVI SLKRKHSDCS GDDGNSETKP EIYESLNELK LEEEEELTTV
0401: HHESRSPSNN TTVDIFSIVK GTGRRKNLMR SNPTDKSSEA ENAAGLRVKK IKRTPEDEKE SMVLVEKLRK EIREAVRNKS MEDIRENQFD PKLLAAFRAA
0501: VAGPKTGEAP RRSSALAVKA KKLMLQKGKV RENLTKKIYA DLNGKRKSAW HRDCEVEFWK HRCIQGRKPE KIETLKSVLS LLKNKPADTK TNFSSETPQA
0601: SNPILSRLYL ADTSVFPRND NLKPLLAPKE MGNSQNNGKP TEASKTLPKI SAAKGSSVKA AGSKLNSGNK QSDGQPNLTS SNSKEMVENP DDLKKDKRKW
0701: ALQVLARKKA LAGNNSTQDK EGSPELKGNY PLLAQLPADM RPSLATSRHN KVPVAVRQTQ LYRLTEHLLK KENLLTIRRS AATELAVADA INIEKAIADK
0801: SSSKVVYLNL CSQEILHHSE SKTMDNAVEP NSSSPMADSE SERISSKDSD NPAVLEALRA AGLADSPPNS PTRSVEVLPE KGDSSLDKTR ETGPYNVFDM
0901: DSVPDTDIFG DFEYELDEED YFGATMAKKA SVMQPDESLT KVKVVLSTVQ PGKSLNPSEV VEDEETTTEN LNETTNGKED GKSFVPMELV PEAEGEGEGE
1001: GEGEGEGEGG GEILSVAECE ELYGPGTEKL VERPLIEGFA ENGVKAKAPD SECESNTQRE FIASNFEITC IQEKKLPRSI QKCKPSEKPS KEEKGKADGF
1101: GNSITKKVEA YIKEHIRPLC KSGVINVEQY RWAVTKTTEK VMKYHSKAKS ANFLIKEGDK IKKLAEQYVE TASSGAHHKD KCK
Arabidopsis Description
unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plant /.../37; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT4G10930]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.