Factsheet for AT4G10930.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY05126	Canola	nucleus	64.67	67.11
CDX90783	Canola	nucleus	64.07	66.09
Bra000729.1-P	Field mustard	nucleus	65.34	65.29
KRH38611	Soybean	cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole	6.34	61.48
VIT_02s0025g01650.t01	Wine grape	nucleus	40.83	37.68
Solyc12g055910.1.1	Tomato	nucleus	38.72	37.42
KRH41328	Soybean	nucleus	39.22	35.86
KRH60053	Soybean	nucleus	38.97	35.27
Os12t0209700-01	Rice	nucleus	14.71	30.96
TraesCS3D01G287700.1	Wheat	nucleus	31.95	29.51
OQU84317	Sorghum	nucleus	30.94	29.23
GSMUA_Achr3P31620_001	Banana	nucleus	32.8	29.13
TraesCS3A01G287900.3	Wheat	nucleus	32.12	29.03
TraesCS3B01G322600.5	Wheat	mitochondrion	31.95	28.61
Zm00001d053989_P003	Maize	plastid	30.6	27.59
AT3G05670.2	Thale cress	nucleus	6.09	8.15

Protein Annotations

Gene3D:3.30.40.10	MapMan:35.1	EntrezGene:826692	UniProt:A0A2H1ZEM1	ProteinID:AEE82948.2	ArrayExpress:AT4G10930
EnsemblPlantsGene:AT4G10930	RefSeq:AT4G10930	TAIR:AT4G10930	RefSeq:AT4G10930-TAIR-G	EnsemblPlants:AT4G10930.1	TAIR:AT4G10930.1
InterPro:EloA-BP1	GO:GO:0003674	GO:GO:0005488	GO:GO:0046872	InterPro:IPR001841	InterPro:IPR013083
InterPro:IPR019787	RefSeq:NP_001319898.1	PFAM:PF00628	PFAM:PF13639	PFAM:PF15870	PO:PO:0000005
PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001017	PO:PO:0001054
PO:PO:0001078	PO:PO:0001081	PO:PO:0001185	PO:PO:0004507	PO:PO:0007064	PO:PO:0007095
PO:PO:0007098	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616
PO:PO:0008019	PO:PO:0009005	PO:PO:0009006	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0020030	PO:PO:0020038	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022
PO:PO:0025281	ScanProsite:PS00518	PFscan:PS50016	PFscan:PS50089	PANTHER:PTHR22937	PANTHER:PTHR22937:SF76
SMART:SM00184	SMART:SM00249	SUPFAM:SSF57850	SUPFAM:SSF57903	UniParc:UPI0008487F7E	InterPro:Znf_FYVE_PHD
InterPro:Znf_PHD	InterPro:Znf_PHD-finger	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	InterPro:Znf_RING_CS	SEG:seg

Description

unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plant /.../37; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT4G10930]

Coordinates

chr4:-:6704911..6711248

Molecular Weight (calculated)

130488.0 Da

IEP (calculated)

4.721

GRAVY (calculated)

-0.684

Length

1183 amino acids

Sequence
(BLAST)

0001: MELDFDASNL VEDEAVEVEH NGMTEIEGER CGICMDIIID RGVLDCCQHW FCFECIDNWS TIMNLCPLCQ REFQLITCVP VFDSGESSKV DEDLVSGDED
0101: CCIEEETDVV SSPSHYIDDT HYIDENAVVC LDGDLCKIRN TFSYIEGDSN LDTSIACDSC DMWYHAICVG FDVENASEDT WVCPRCLSNE KPHEPDTSPM
0201: ETQPDTSLME TRKSLDISEK TNSGCSVEAV YSGNFSVTVA DDGETALVVS IVKGDESHMG PSDTNPLPVQ AKMDGDPDSS HLKILCREEN TEQVAVKSEL
0301: NQSLPHDISS RLSSDSDQPF FAADIENRAD PVVEKDCLSI DDKKNLSTAA ISNSDVASVI SLKRKHSDCS GDDGNSETKP EIYESLNELK LEEEEELTTV
0401: HHESRSPSNN TTVDIFSIVK GTGRRKNLMR SNPTDKSSEA ENAAGLRVKK IKRTPEDEKE SMVLVEKLRK EIREAVRNKS MEDIRENQFD PKLLAAFRAA
0501: VAGPKTGEAP RRSSALAVKA KKLMLQKGKV RENLTKKIYA DLNGKRKSAW HRDCEVEFWK HRCIQGRKPE KIETLKSVLS LLKNKPADTK TNFSSETPQA
0601: SNPILSRLYL ADTSVFPRND NLKPLLAPKE MGNSQNNGKP TEASKTLPKI SAAKGSSVKA AGSKLNSGNK QSDGQPNLTS SNSKEMVENP DDLKKDKRKW
0701: ALQVLARKKA LAGNNSTQDK EGSPELKGNY PLLAQLPADM RPSLATSRHN KVPVAVRQTQ LYRLTEHLLK KENLLTIRRS AATELAVADA INIEKAIADK
0801: SSSKVVYLNL CSQEILHHSE SKTMDNAVEP NSSSPMADSE SERISSKDSD NPAVLEALRA AGLADSPPNS PTRSVEVLPE KGDSSLDKTR ETGPYNVFDM
0901: DSVPDTDIFG DFEYELDEED YFGATMAKKA SVMQPDESLT KVKVVLSTVQ PGKSLNPSEV VEDEETTTEN LNETTNGKED GKSFVPMELV PEAEGEGEGE
1001: GEGEGEGEGG GEILSVAECE ELYGPGTEKL VERPLIEGFA ENGVKAKAPD SECESNTQRE FIASNFEITC IQEKKLPRSI QKCKPSEKPS KEEKGKADGF
1101: GNSITKKVEA YIKEHIRPLC KSGVINVEQY RWAVTKTTEK VMKYHSKAKS ANFLIKEGDK IKKLAEQYVE TASSGAHHKD KCK

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.