Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plastid:
22065420
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU84317 | Sorghum | nucleus | 75.84 | 79.47 |
| KRH38611 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 5.41 | 58.2 |
| TraesCS3D01G287700.1 | Wheat | nucleus | 51.68 | 52.93 |
| TraesCS3A01G287900.3 | Wheat | nucleus | 52.29 | 52.41 |
| TraesCS3B01G322600.5 | Wheat | mitochondrion | 51.98 | 51.63 |
| Os12t0209700-01 | Rice | nucleus | 19.51 | 45.55 |
| GSMUA_Achr3P31620_001 | Banana | nucleus | 32.09 | 31.61 |
| Solyc12g055910.1.1 | Tomato | nucleus | 29.34 | 31.45 |
| AT4G10930.1 | Thale cress | nucleus | 27.59 | 30.6 |
| KRH41328 | Soybean | nucleus | 30.11 | 30.53 |
| CDY05126 | Canola | nucleus | 26.3 | 30.26 |
| KRH60053 | Soybean | nucleus | 30.11 | 30.22 |
| CDX90783 | Canola | nucleus | 26.37 | 30.17 |
| VIT_02s0025g01650.t01 | Wine grape | nucleus | 28.81 | 29.49 |
| Bra000729.1-P | Field mustard | nucleus | 25.99 | 28.8 |
| Zm00001d045755_P001 | Maize | nucleus | 6.63 | 11.87 |
| Zm00001d047676_P002 | Maize | nucleus | 4.12 | 5.19 |
Protein Annotations
| Gene3D:3.30.40.10 | MapMan:35.1 | UniProt:A0A1D6QU35 | ProteinID:AQK60926.1 | ncoils:Coil | InterPro:EloA-BP1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 | InterPro:IPR001841 | InterPro:IPR013083 | InterPro:IPR019787 |
| PFAM:PF00628 | PFAM:PF13639 | PFAM:PF15870 | ScanProsite:PS00518 | PFscan:PS50016 | PFscan:PS50089 |
| PANTHER:PTHR22937 | PANTHER:PTHR22937:SF76 | SMART:SM00184 | SMART:SM00249 | SUPFAM:SSF57850 | SUPFAM:SSF57903 |
| UniParc:UPI0008430084 | EnsemblPlantsGene:Zm00001d053989 | EnsemblPlants:Zm00001d053989_P003 | EnsemblPlants:Zm00001d053989_T003 | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD |
| InterPro:Znf_PHD-finger | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_RING_CS | SEG:seg | : |
Description
PHD-transcription factor 5RING/U-box protein
Coordinates
chr4:+:244755447..244765434
Molecular Weight (calculated)
144275.0 Da
IEP (calculated)
5.284
GRAVY (calculated)
-0.756
Length
1312 amino acids
Sequence
(BLAST)
(BLAST)
0001: MFPWEMDIDG ESSKTLGQME DLTQSSATYT SQMLLSNLAS SGIKEKIPLE NESCGICRDI VIDRGVLDCC SHWFCYTCID NWAAITNRCP LCKSEFQHIT
0101: CTPVYGTIGA TDEDEYSLTS CDDDWYGQEE SSTLSFPSYY IDAEAVVCLD DGDCKIRNGL VAAEDDSTLD TSIACDSCDK WYHAICVAFN ATMASDSSWL
0201: CPRCKFNEVE YEANVILKQN LGEDCVIGSD RTCTNASFSG RVSVSVADEG ETALVVSMVG AHSETRGGLS EASLGLETAH ETFNCSPYPS HSKDVLVADA
0301: SSLRNTDIVS RSQNKPSEIN VVHTLCSEPT ETSLQFSPIR EPATTIFSSE QDNMSTERLE VPKLVSSCPV VDNSKEAKST GEENAAQQSN NELSSVIKSP
0401: QPASSDAVHQ MKTAQNLQLP LRHDEHSSDD RKEEHIESGN EMIHPAKKAK LEVQEDINVI GNFDFSSIHS HTTSPAKAIT DDIMSESVAQ QKSIPDIMSI
0501: VDGEVYRRDP GRELAKPVGR RAGDKPGPRV KKIFRKEEGK ESSALVQKLQ KEIKEVVRDT GTNILEKDES FDEKLLTAFR AAIGKSVDGP AKSTNTNQLI
0601: RTRRSLLQKG KKRENLTKKL YGTSTGRRRS DWHRDWEVEF WKYRCSPGIN PEKIETLQSV LQLLKKSSEM DKESAKGKRE ENNNSSILSR LYLADASVVP
0701: RKDDIRPLSA LAGCAPLEKS SQIKASCNKS SSIPAGGNET MKISSPSSTG KASSYSILNK EAPSRRENRN SQPSQDKRNQ SSGDIKQDKR KWALEILARK
0801: NASSITNKDQ TGGNDALKGN FPLLAQLPVD MRPQLAAGSN KKVPVSVRQT YVSQAQFHRI AEHYLQKANL DVIRRCADTE LAIADAVNVE KGIYERSNSK
0901: SIYVNLCSQA TRQHAKAKSD NDTSTLTKRT ESGSDQISQE ATSEGTNVSG SDMEEDLNRA AISNQKNELE DDTAPEHIVH KDTVSFNSAE DALRKAGLFD
1001: SPPNSPERGN TAVEGESRLE EPGKNLQSNP EDVSLLKDGN SSLPTDLDAA NCQSLDTIMC EQPEPNSEEQ QKLTGKVEID NVATNKTKQP NNEGQHKLIG
1101: KGDTEDVAAN KTNAANLTEG DRCSEKHEKS NGPVIEISVD CNMPDKITGH VEASREIEKA AIGLPNQSHE DDLTRDSEVI SKPKNSELTK EKSCSDKPST
1201: SSKDPKGDKP NRAAEGGDDP KKRPRDQAGK NTSDASNSTY KKVEMFVKEQ IRPLCKSAVI TVDQYKWAVA KTTDKVMSFH RDAKNANFLI KEGDKVRKLA
1301: LQYVEASQQK IS
0101: CTPVYGTIGA TDEDEYSLTS CDDDWYGQEE SSTLSFPSYY IDAEAVVCLD DGDCKIRNGL VAAEDDSTLD TSIACDSCDK WYHAICVAFN ATMASDSSWL
0201: CPRCKFNEVE YEANVILKQN LGEDCVIGSD RTCTNASFSG RVSVSVADEG ETALVVSMVG AHSETRGGLS EASLGLETAH ETFNCSPYPS HSKDVLVADA
0301: SSLRNTDIVS RSQNKPSEIN VVHTLCSEPT ETSLQFSPIR EPATTIFSSE QDNMSTERLE VPKLVSSCPV VDNSKEAKST GEENAAQQSN NELSSVIKSP
0401: QPASSDAVHQ MKTAQNLQLP LRHDEHSSDD RKEEHIESGN EMIHPAKKAK LEVQEDINVI GNFDFSSIHS HTTSPAKAIT DDIMSESVAQ QKSIPDIMSI
0501: VDGEVYRRDP GRELAKPVGR RAGDKPGPRV KKIFRKEEGK ESSALVQKLQ KEIKEVVRDT GTNILEKDES FDEKLLTAFR AAIGKSVDGP AKSTNTNQLI
0601: RTRRSLLQKG KKRENLTKKL YGTSTGRRRS DWHRDWEVEF WKYRCSPGIN PEKIETLQSV LQLLKKSSEM DKESAKGKRE ENNNSSILSR LYLADASVVP
0701: RKDDIRPLSA LAGCAPLEKS SQIKASCNKS SSIPAGGNET MKISSPSSTG KASSYSILNK EAPSRRENRN SQPSQDKRNQ SSGDIKQDKR KWALEILARK
0801: NASSITNKDQ TGGNDALKGN FPLLAQLPVD MRPQLAAGSN KKVPVSVRQT YVSQAQFHRI AEHYLQKANL DVIRRCADTE LAIADAVNVE KGIYERSNSK
0901: SIYVNLCSQA TRQHAKAKSD NDTSTLTKRT ESGSDQISQE ATSEGTNVSG SDMEEDLNRA AISNQKNELE DDTAPEHIVH KDTVSFNSAE DALRKAGLFD
1001: SPPNSPERGN TAVEGESRLE EPGKNLQSNP EDVSLLKDGN SSLPTDLDAA NCQSLDTIMC EQPEPNSEEQ QKLTGKVEID NVATNKTKQP NNEGQHKLIG
1101: KGDTEDVAAN KTNAANLTEG DRCSEKHEKS NGPVIEISVD CNMPDKITGH VEASREIEKA AIGLPNQSHE DDLTRDSEVI SKPKNSELTK EKSCSDKPST
1201: SSKDPKGDKP NRAAEGGDDP KKRPRDQAGK NTSDASNSTY KKVEMFVKEQ IRPLCKSAVI TVDQYKWAVA KTTDKVMSFH RDAKNANFLI KEGDKVRKLA
1301: LQYVEASQQK IS
0001: MELDFDASNL VEDEAVEVEH NGMTEIEGER CGICMDIIID RGVLDCCQHW FCFECIDNWS TIMNLCPLCQ REFQLITCVP VFDSGESSKV DEDLVSGDED
0101: CCIEEETDVV SSPSHYIDDT HYIDENAVVC LDGDLCKIRN TFSYIEGDSN LDTSIACDSC DMWYHAICVG FDVENASEDT WVCPRCLSNE KPHEPDTSPM
0201: ETQPDTSLME TRKSLDISEK TNSGCSVEAV YSGNFSVTVA DDGETALVVS IVKGDESHMG PSDTNPLPVQ AKMDGDPDSS HLKILCREEN TEQVAVKSEL
0301: NQSLPHDISS RLSSDSDQPF FAADIENRAD PVVEKDCLSI DDKKNLSTAA ISNSDVASVI SLKRKHSDCS GDDGNSETKP EIYESLNELK LEEEEELTTV
0401: HHESRSPSNN TTVDIFSIVK GTGRRKNLMR SNPTDKSSEA ENAAGLRVKK IKRTPEDEKE SMVLVEKLRK EIREAVRNKS MEDIRENQFD PKLLAAFRAA
0501: VAGPKTGEAP RRSSALAVKA KKLMLQKGKV RENLTKKIYA DLNGKRKSAW HRDCEVEFWK HRCIQGRKPE KIETLKSVLS LLKNKPADTK TNFSSETPQA
0601: SNPILSRLYL ADTSVFPRND NLKPLLAPKE MGNSQNNGKP TEASKTLPKI SAAKGSSVKA AGSKLNSGNK QSDGQPNLTS SNSKEMVENP DDLKKDKRKW
0701: ALQVLARKKA LAGNNSTQDK EGSPELKGNY PLLAQLPADM RPSLATSRHN KVPVAVRQTQ LYRLTEHLLK KENLLTIRRS AATELAVADA INIEKAIADK
0801: SSSKVVYLNL CSQEILHHSE SKTMDNAVEP NSSSPMADSE SERISSKDSD NPAVLEALRA AGLADSPPNS PTRSVEVLPE KGDSSLDKTR ETGPYNVFDM
0901: DSVPDTDIFG DFEYELDEED YFGATMAKKA SVMQPDESLT KVKVVLSTVQ PGKSLNPSEV VEDEETTTEN LNETTNGKED GKSFVPMELV PEAEGEGEGE
1001: GEGEGEGEGG GEILSVAECE ELYGPGTEKL VERPLIEGFA ENGVKAKAPD SECESNTQRE FIASNFEITC IQEKKLPRSI QKCKPSEKPS KEEKGKADGF
1101: GNSITKKVEA YIKEHIRPLC KSGVINVEQY RWAVTKTTEK VMKYHSKAKS ANFLIKEGDK IKKLAEQYVE TASSGAHHKD KCK
0101: CCIEEETDVV SSPSHYIDDT HYIDENAVVC LDGDLCKIRN TFSYIEGDSN LDTSIACDSC DMWYHAICVG FDVENASEDT WVCPRCLSNE KPHEPDTSPM
0201: ETQPDTSLME TRKSLDISEK TNSGCSVEAV YSGNFSVTVA DDGETALVVS IVKGDESHMG PSDTNPLPVQ AKMDGDPDSS HLKILCREEN TEQVAVKSEL
0301: NQSLPHDISS RLSSDSDQPF FAADIENRAD PVVEKDCLSI DDKKNLSTAA ISNSDVASVI SLKRKHSDCS GDDGNSETKP EIYESLNELK LEEEEELTTV
0401: HHESRSPSNN TTVDIFSIVK GTGRRKNLMR SNPTDKSSEA ENAAGLRVKK IKRTPEDEKE SMVLVEKLRK EIREAVRNKS MEDIRENQFD PKLLAAFRAA
0501: VAGPKTGEAP RRSSALAVKA KKLMLQKGKV RENLTKKIYA DLNGKRKSAW HRDCEVEFWK HRCIQGRKPE KIETLKSVLS LLKNKPADTK TNFSSETPQA
0601: SNPILSRLYL ADTSVFPRND NLKPLLAPKE MGNSQNNGKP TEASKTLPKI SAAKGSSVKA AGSKLNSGNK QSDGQPNLTS SNSKEMVENP DDLKKDKRKW
0701: ALQVLARKKA LAGNNSTQDK EGSPELKGNY PLLAQLPADM RPSLATSRHN KVPVAVRQTQ LYRLTEHLLK KENLLTIRRS AATELAVADA INIEKAIADK
0801: SSSKVVYLNL CSQEILHHSE SKTMDNAVEP NSSSPMADSE SERISSKDSD NPAVLEALRA AGLADSPPNS PTRSVEVLPE KGDSSLDKTR ETGPYNVFDM
0901: DSVPDTDIFG DFEYELDEED YFGATMAKKA SVMQPDESLT KVKVVLSTVQ PGKSLNPSEV VEDEETTTEN LNETTNGKED GKSFVPMELV PEAEGEGEGE
1001: GEGEGEGEGG GEILSVAECE ELYGPGTEKL VERPLIEGFA ENGVKAKAPD SECESNTQRE FIASNFEITC IQEKKLPRSI QKCKPSEKPS KEEKGKADGF
1101: GNSITKKVEA YIKEHIRPLC KSGVINVEQY RWAVTKTTEK VMKYHSKAKS ANFLIKEGDK IKKLAEQYVE TASSGAHHKD KCK
Arabidopsis Description
unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plant /.../37; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT4G10930]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.