Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT4G10930.1 | KRH25249 | AT3G03000.1 | 21798944 |
| AT4G10930.1 | KRH30413 | AT3G03000.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH38611 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 8.35 | 88.52 |
| KRH60053 | Soybean | nucleus | 88.56 | 87.68 |
| VIT_02s0025g01650.t01 | Wine grape | nucleus | 45.44 | 45.87 |
| Solyc12g055910.1.1 | Tomato | nucleus | 41.27 | 43.63 |
| CDY05126 | Canola | nucleus | 35.86 | 40.7 |
| CDX90783 | Canola | nucleus | 36.01 | 40.63 |
| Bra000729.1-P | Field mustard | nucleus | 36.09 | 39.44 |
| AT4G10930.1 | Thale cress | nucleus | 35.86 | 39.22 |
| GSMUA_Achr3P31620_001 | Banana | nucleus | 34.0 | 33.03 |
| OQU84317 | Sorghum | nucleus | 29.98 | 30.99 |
| Os12t0209700-01 | Rice | nucleus | 13.37 | 30.78 |
| TraesCS3D01G287700.1 | Wheat | nucleus | 29.98 | 30.29 |
| Zm00001d053989_P003 | Maize | plastid | 30.53 | 30.11 |
| TraesCS3A01G287900.3 | Wheat | nucleus | 30.22 | 29.87 |
| TraesCS3B01G322600.5 | Wheat | mitochondrion | 30.06 | 29.45 |
| KRG98787 | Soybean | cytosol | 6.8 | 25.29 |
| KRH56752 | Soybean | nucleus | 4.1 | 13.52 |
| KRH03187 | Soybean | nucleus | 6.18 | 13.09 |
| KRH38612 | Soybean | cytosol, nucleus, plastid | 2.32 | 11.9 |
| KRH33855 | Soybean | nucleus | 5.72 | 9.37 |
| KRG92939 | Soybean | nucleus | 5.8 | 8.74 |
Protein Annotations
| EntrezGene:100783955 | Gene3D:3.30.40.10 | MapMan:35.1 | EMBL:ACUP02004759 | ncoils:Coil | EnsemblPlantsGene:GLYMA_08G023800 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 | InterPro:IPR001841 | InterPro:IPR013083 | InterPro:IPR019787 |
| UniProt:K7L4K0 | EnsemblPlants:KRH41328 | ProteinID:KRH41328 | ProteinID:KRH41328.1 | ProteinID:KRH41329.1 | ProteinID:KRH41330.1 |
| PFAM:PF00628 | PFAM:PF13639 | ScanProsite:PS00518 | PFscan:PS50016 | PFscan:PS50089 | PANTHER:PTHR22937 |
| PANTHER:PTHR22937:SF76 | SMART:SM00184 | SMART:SM00249 | SUPFAM:SSF57850 | SUPFAM:SSF57903 | UniParc:UPI0002965A88 |
| InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_RING_CS |
| SEG:seg | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr8:+:1891275..1903958
Molecular Weight (calculated)
142650.0 Da
IEP (calculated)
4.885
GRAVY (calculated)
-0.656
Length
1294 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEADFVTNDM LTLTQDAFYA NDNDDAAVEG ERCGICMDMV IDRGLLDCCQ HWFCFVCIDN WATITNLCPL CQNEFQLITC VPVYDTIGNN KVEDDSFFRD
0101: DDWSIEEKNN TLSFPSYYID ENAVICLDGD GCKVRNGLAT IEGDSDLDTS IACDSCDIWY HAFCVGFDTE GTSDSTWLCP RCVVDEVSKG TSNSVERTTV
0201: ECNADNHNSN SDCHAEDSFS GKVSVSVADT GETAVVVSMV DQTKWVPSTS EKSLLPFEVG EDPMTESCIL MSVTSDQQSG EVKTETNTLP VMEEELELSL
0301: SNNISCSVTS KSSVHNDLKK NVSGARDEPS GFDGTKLFDK SLTKTSPSRI ESEMGLQLGL SVGSFLSVGN ADKNETRDQA TDVLYSSSEE CFLKGDEIEA
0401: NACKDSAKVA GGKRKHADYC NEQVYIKDDD GNVKPELLDG DDKSELPDEV AQKKIRATGS QMTSSNDSAG AHLLENAQKC PALKQSPTNS IVKSDIMNIV
0501: KGTNRRHSKE RTDTNACDKL SENKGNMAGL RVKKIMKRVS DDGESSLVVQ NLRKEIREAV RNKSSINFED NHFDPKLLEA FRAAITGPKT ELVNKLSPAA
0601: IKAKKSMLQK GKVRENLTKK IFGTSNGRRK RAWDRDCEIE FWKYRCMRAT KPEKIETLKS VLDLLRKGSN NPESKQASEC QAKNPILSRL YLADTSVFPR
0701: KKDVKPLSVL KTIANSEQTK HSPSEKVPNL SVDNNTIKAT DINNLLSKNS VCSSEKKVDK KLVRGPVGDN STSGKVRSDN HSERTSVSSA GAKTSTKELD
0801: LKSGCMKSDK RKWALEVLAR KTAATSGNTA NGNQEDNAVF KGNYPVLAQL PIDMRPVLAP CHHNKIPISV RQTQLYRLTE RILRNTNLAV IRRTADTELA
0901: VADAINIEKE VADRSNSKLV YLNLCSQELL HHTNNTKTNV ATDTSPPASS SMLTDQQSEL NTDDLSTDPE VETALKNAGL LSDSPPSSPH ENRETCNGDM
1001: SGPDNILEPD SHPDLDIYGD FEYDLEDEDY IGASVTKVSF PKQEQNESKV KLVFSTMNLK KSDIALDCAD CEGSERNEVP GDASFSPNFQ DDAVLRDRAS
1101: TIDAETGQPS VSSVLLSCEG AVEPPDSEFE ELYGPDKEPL IKKNPVGESR SLHGDGKTET LSVANDCHND EKHVLDNAVN ASELGNENLT EKVSEAGENF
1201: QRKKEKSDVT AKQTDSVNHI IKKVEAYIKE HIRPLCKSGV ITADQYRWAV AKTTEKVMKY HSRSKSANFL IKEGEKVKKL AEQYVEAAQQ NRKN
0101: DDWSIEEKNN TLSFPSYYID ENAVICLDGD GCKVRNGLAT IEGDSDLDTS IACDSCDIWY HAFCVGFDTE GTSDSTWLCP RCVVDEVSKG TSNSVERTTV
0201: ECNADNHNSN SDCHAEDSFS GKVSVSVADT GETAVVVSMV DQTKWVPSTS EKSLLPFEVG EDPMTESCIL MSVTSDQQSG EVKTETNTLP VMEEELELSL
0301: SNNISCSVTS KSSVHNDLKK NVSGARDEPS GFDGTKLFDK SLTKTSPSRI ESEMGLQLGL SVGSFLSVGN ADKNETRDQA TDVLYSSSEE CFLKGDEIEA
0401: NACKDSAKVA GGKRKHADYC NEQVYIKDDD GNVKPELLDG DDKSELPDEV AQKKIRATGS QMTSSNDSAG AHLLENAQKC PALKQSPTNS IVKSDIMNIV
0501: KGTNRRHSKE RTDTNACDKL SENKGNMAGL RVKKIMKRVS DDGESSLVVQ NLRKEIREAV RNKSSINFED NHFDPKLLEA FRAAITGPKT ELVNKLSPAA
0601: IKAKKSMLQK GKVRENLTKK IFGTSNGRRK RAWDRDCEIE FWKYRCMRAT KPEKIETLKS VLDLLRKGSN NPESKQASEC QAKNPILSRL YLADTSVFPR
0701: KKDVKPLSVL KTIANSEQTK HSPSEKVPNL SVDNNTIKAT DINNLLSKNS VCSSEKKVDK KLVRGPVGDN STSGKVRSDN HSERTSVSSA GAKTSTKELD
0801: LKSGCMKSDK RKWALEVLAR KTAATSGNTA NGNQEDNAVF KGNYPVLAQL PIDMRPVLAP CHHNKIPISV RQTQLYRLTE RILRNTNLAV IRRTADTELA
0901: VADAINIEKE VADRSNSKLV YLNLCSQELL HHTNNTKTNV ATDTSPPASS SMLTDQQSEL NTDDLSTDPE VETALKNAGL LSDSPPSSPH ENRETCNGDM
1001: SGPDNILEPD SHPDLDIYGD FEYDLEDEDY IGASVTKVSF PKQEQNESKV KLVFSTMNLK KSDIALDCAD CEGSERNEVP GDASFSPNFQ DDAVLRDRAS
1101: TIDAETGQPS VSSVLLSCEG AVEPPDSEFE ELYGPDKEPL IKKNPVGESR SLHGDGKTET LSVANDCHND EKHVLDNAVN ASELGNENLT EKVSEAGENF
1201: QRKKEKSDVT AKQTDSVNHI IKKVEAYIKE HIRPLCKSGV ITADQYRWAV AKTTEKVMKY HSRSKSANFL IKEGEKVKKL AEQYVEAAQQ NRKN
0001: MELDFDASNL VEDEAVEVEH NGMTEIEGER CGICMDIIID RGVLDCCQHW FCFECIDNWS TIMNLCPLCQ REFQLITCVP VFDSGESSKV DEDLVSGDED
0101: CCIEEETDVV SSPSHYIDDT HYIDENAVVC LDGDLCKIRN TFSYIEGDSN LDTSIACDSC DMWYHAICVG FDVENASEDT WVCPRCLSNE KPHEPDTSPM
0201: ETQPDTSLME TRKSLDISEK TNSGCSVEAV YSGNFSVTVA DDGETALVVS IVKGDESHMG PSDTNPLPVQ AKMDGDPDSS HLKILCREEN TEQVAVKSEL
0301: NQSLPHDISS RLSSDSDQPF FAADIENRAD PVVEKDCLSI DDKKNLSTAA ISNSDVASVI SLKRKHSDCS GDDGNSETKP EIYESLNELK LEEEEELTTV
0401: HHESRSPSNN TTVDIFSIVK GTGRRKNLMR SNPTDKSSEA ENAAGLRVKK IKRTPEDEKE SMVLVEKLRK EIREAVRNKS MEDIRENQFD PKLLAAFRAA
0501: VAGPKTGEAP RRSSALAVKA KKLMLQKGKV RENLTKKIYA DLNGKRKSAW HRDCEVEFWK HRCIQGRKPE KIETLKSVLS LLKNKPADTK TNFSSETPQA
0601: SNPILSRLYL ADTSVFPRND NLKPLLAPKE MGNSQNNGKP TEASKTLPKI SAAKGSSVKA AGSKLNSGNK QSDGQPNLTS SNSKEMVENP DDLKKDKRKW
0701: ALQVLARKKA LAGNNSTQDK EGSPELKGNY PLLAQLPADM RPSLATSRHN KVPVAVRQTQ LYRLTEHLLK KENLLTIRRS AATELAVADA INIEKAIADK
0801: SSSKVVYLNL CSQEILHHSE SKTMDNAVEP NSSSPMADSE SERISSKDSD NPAVLEALRA AGLADSPPNS PTRSVEVLPE KGDSSLDKTR ETGPYNVFDM
0901: DSVPDTDIFG DFEYELDEED YFGATMAKKA SVMQPDESLT KVKVVLSTVQ PGKSLNPSEV VEDEETTTEN LNETTNGKED GKSFVPMELV PEAEGEGEGE
1001: GEGEGEGEGG GEILSVAECE ELYGPGTEKL VERPLIEGFA ENGVKAKAPD SECESNTQRE FIASNFEITC IQEKKLPRSI QKCKPSEKPS KEEKGKADGF
1101: GNSITKKVEA YIKEHIRPLC KSGVINVEQY RWAVTKTTEK VMKYHSKAKS ANFLIKEGDK IKKLAEQYVE TASSGAHHKD KCK
0101: CCIEEETDVV SSPSHYIDDT HYIDENAVVC LDGDLCKIRN TFSYIEGDSN LDTSIACDSC DMWYHAICVG FDVENASEDT WVCPRCLSNE KPHEPDTSPM
0201: ETQPDTSLME TRKSLDISEK TNSGCSVEAV YSGNFSVTVA DDGETALVVS IVKGDESHMG PSDTNPLPVQ AKMDGDPDSS HLKILCREEN TEQVAVKSEL
0301: NQSLPHDISS RLSSDSDQPF FAADIENRAD PVVEKDCLSI DDKKNLSTAA ISNSDVASVI SLKRKHSDCS GDDGNSETKP EIYESLNELK LEEEEELTTV
0401: HHESRSPSNN TTVDIFSIVK GTGRRKNLMR SNPTDKSSEA ENAAGLRVKK IKRTPEDEKE SMVLVEKLRK EIREAVRNKS MEDIRENQFD PKLLAAFRAA
0501: VAGPKTGEAP RRSSALAVKA KKLMLQKGKV RENLTKKIYA DLNGKRKSAW HRDCEVEFWK HRCIQGRKPE KIETLKSVLS LLKNKPADTK TNFSSETPQA
0601: SNPILSRLYL ADTSVFPRND NLKPLLAPKE MGNSQNNGKP TEASKTLPKI SAAKGSSVKA AGSKLNSGNK QSDGQPNLTS SNSKEMVENP DDLKKDKRKW
0701: ALQVLARKKA LAGNNSTQDK EGSPELKGNY PLLAQLPADM RPSLATSRHN KVPVAVRQTQ LYRLTEHLLK KENLLTIRRS AATELAVADA INIEKAIADK
0801: SSSKVVYLNL CSQEILHHSE SKTMDNAVEP NSSSPMADSE SERISSKDSD NPAVLEALRA AGLADSPPNS PTRSVEVLPE KGDSSLDKTR ETGPYNVFDM
0901: DSVPDTDIFG DFEYELDEED YFGATMAKKA SVMQPDESLT KVKVVLSTVQ PGKSLNPSEV VEDEETTTEN LNETTNGKED GKSFVPMELV PEAEGEGEGE
1001: GEGEGEGEGG GEILSVAECE ELYGPGTEKL VERPLIEGFA ENGVKAKAPD SECESNTQRE FIASNFEITC IQEKKLPRSI QKCKPSEKPS KEEKGKADGF
1101: GNSITKKVEA YIKEHIRPLC KSGVINVEQY RWAVTKTTEK VMKYHSKAKS ANFLIKEGDK IKKLAEQYVE TASSGAHHKD KCK
Arabidopsis Description
unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plant /.../37; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT4G10930]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.