Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- peroxisome 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH56752 | Soybean | nucleus | 43.37 | 67.6 |
| VIT_17s0000g04770.t01 | Wine grape | nucleus | 34.04 | 32.1 |
| PGSC0003DMT400010393 | Potato | nucleus | 31.75 | 29.85 |
| Solyc06g069360.2.1 | Tomato | nucleus | 31.1 | 29.23 |
| GSMUA_Achr3P10630_001 | Banana | nucleus | 29.13 | 26.33 |
| Zm00001d045755_P001 | Maize | nucleus | 26.19 | 21.83 |
| Os06t0283200-01 | Rice | nucleus | 26.51 | 21.23 |
| EER88243 | Sorghum | nucleus | 25.37 | 19.97 |
| KRH38611 | Soybean | cytosol, endoplasmic reticulum, extracellular, golgi, plasma membrane, vacuole | 3.76 | 18.85 |
| TraesCS7B01G119600.1 | Wheat | nucleus | 27.5 | 18.81 |
| TraesCS7D01G214800.1 | Wheat | nucleus | 27.17 | 17.58 |
| TraesCS7A01G212900.1 | Wheat | nucleus | 27.0 | 17.44 |
| KRG92939 | Soybean | nucleus | 18.66 | 13.29 |
| HORVU7Hr1G043160.1 | Barley | nucleus | 15.71 | 13.13 |
| KRH38612 | Soybean | cytosol, nucleus, plastid | 4.58 | 11.11 |
| KRH33855 | Soybean | nucleus | 14.08 | 10.89 |
| KRG98787 | Soybean | cytosol | 4.91 | 8.62 |
| KRH41328 | Soybean | nucleus | 13.09 | 6.18 |
| KRH60053 | Soybean | nucleus | 12.6 | 5.89 |
Protein Annotations
| EntrezGene:100808541 | Gene3D:3.30.40.10 | MapMan:35.2 | EMBL:ACUP02010336 | ncoils:Coil | EnsemblPlantsGene:GLYMA_17G082300 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 | InterPro:IPR001841 | InterPro:IPR013083 | InterPro:IPR019787 |
| UniProt:K7MKK5 | EnsemblPlants:KRH03187 | ProteinID:KRH03187 | ProteinID:KRH03187.1 | PFAM:PF00628 | PFAM:PF13639 |
| ScanProsite:PS00518 | PFscan:PS50016 | PFscan:PS50089 | PANTHER:PTHR10615 | PANTHER:PTHR10615:SF132 | SMART:SM00184 |
| SMART:SM00249 | SUPFAM:SSF57850 | SUPFAM:SSF57903 | UniParc:UPI00029566F5 | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD |
| InterPro:Znf_PHD-finger | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | InterPro:Znf_RING_CS | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr17:-:6406245..6410800
Molecular Weight (calculated)
68383.9 Da
IEP (calculated)
8.493
GRAVY (calculated)
-0.638
Length
611 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSSALGSPK KRLRAQTEEE DEEEVVCCGI CYAESGVSIA GEIDCCSHHF CFVCIMEWAK HESRCPICRQ RFSNVRRLPM HGVFSSSRDV KVPHRDQLYH
101: PHGNMATGPA DSYTETKCGV CHAGTDEHLL LLCDLCDTAS HTYCVGLGYT VPEGDWFCHD CAISRKINIK EDSDQQNVVP TAEPRVTVDI FDIVRETGSQ
201: VVQRPRASPL QQNLSSPSVI PLPDRLSYLS RLKGKRPVTG FCHMQRNVKA FRENWNALRS GSLQFRCNSS QPGSTVSQKQ DSSSLSHHKL DDLHSMASTS
301: LQQSTVQGGP SNKMLNERVF KDADKAWKMM DRAKKIQLPH HRTGRVDKPS CSGGARKISL AHCNFSEVKD QHSKALDLRN TKKEKQCDYS RLNQNLENRS
401: TLKLEEKRQS RDTCEKMIHV RDHTTHSKGY CERPLSRKVH TSIQGGPCRE DGLRNVAEEQ SLYACLVTSA DLASSRDKFG SMFSNRGVNL VNEEKRLAKS
501: SEDGNTRNIV DSKTEIQSLV KLNLKLLTRD KKLGFDTFKV VARQATHTIL AACSSDQQKS STSSSSSVCS HADNTPQFQK STLMPNCCRQ CFYNFVNNVV
601: HSTILEKVGC A
101: PHGNMATGPA DSYTETKCGV CHAGTDEHLL LLCDLCDTAS HTYCVGLGYT VPEGDWFCHD CAISRKINIK EDSDQQNVVP TAEPRVTVDI FDIVRETGSQ
201: VVQRPRASPL QQNLSSPSVI PLPDRLSYLS RLKGKRPVTG FCHMQRNVKA FRENWNALRS GSLQFRCNSS QPGSTVSQKQ DSSSLSHHKL DDLHSMASTS
301: LQQSTVQGGP SNKMLNERVF KDADKAWKMM DRAKKIQLPH HRTGRVDKPS CSGGARKISL AHCNFSEVKD QHSKALDLRN TKKEKQCDYS RLNQNLENRS
401: TLKLEEKRQS RDTCEKMIHV RDHTTHSKGY CERPLSRKVH TSIQGGPCRE DGLRNVAEEQ SLYACLVTSA DLASSRDKFG SMFSNRGVNL VNEEKRLAKS
501: SEDGNTRNIV DSKTEIQSLV KLNLKLLTRD KKLGFDTFKV VARQATHTIL AACSSDQQKS STSSSSSVCS HADNTPQFQK STLMPNCCRQ CFYNFVNNVV
601: HSTILEKVGC A
001: MGKRNTSWAR NSNRKVRSKD KGSDESDEDY VISDEDEEES EADLKEEYAS SVDGEPSFDG FNGSDAVEDE ELDEVEEEDV MLRNVEWPKV KTGPRGNRKI
101: TGCKSRKTNQ VVVSDNEDVD LDDADDEDDE IRNSRNAVGK SGSLDGEKHQ RIGLGKRRRV FYEIEDEDGD YPEEDGDEEE ERDVENVDSN SLHDGEDGKM
201: ALEEQDNVSH ETEKEDDGDY EDEDEDDDGD EDFTADEDVS LDEEEEEEII ACNKNALKVC KGNKRKRRSG EGRKRRKKCS VAKTRLTRGR KRRVRNTKKG
301: VDEDDDDFVD DCLPARKKAK TKSSRPRPRR RCTVPSDSDV ASSGESDYEY TISEEEREQI REAGSLLKSS VNHASSIRQT TVNKDLPQLR KSPVKKGEKK
401: VELVKRDVIK NVCGICLSEE DMRRLKGTLD CCSHYFCFTC IMEWSKVESR CPLCKQRFRT ISKPARSTPG VDLREVVIPV PERDQVYQPT EEELRSYLDP
501: YENIICTECH QGDDDGLMLL CDLCDSSAHT YCVGLGREVP EGNWYCEGCR PVALGSASSQ THIISEQQRG SGFYSRPSPL VVSGQYQDVS LIVSPRTPFF
601: NGENLFSPRI PNGDAQGSSP SGLGATTLSR RRTLHRHIQN IINGDRLINM GARTGGTSSD GFVTTQIGHG RTIDPSQPVA SQETGISLYA ISEERLPNNN
701: SLISAHDPEL LSPKLDEFGS EEAFRRLSNN TFLGERPIDL GFHHGLAQGD PLVSNQQRLH SHMPNTMSSM AGERLQERVK AHLKNLSSQN DLGQTTFDEI
801: STCSIHTILA ACGLEHESSE VHLVPPPVTC THHHMTPGSS SSSSSGSSLM KGCCYSCFDS FVEDVVKMIL DTRQPHWLSL GLH
101: TGCKSRKTNQ VVVSDNEDVD LDDADDEDDE IRNSRNAVGK SGSLDGEKHQ RIGLGKRRRV FYEIEDEDGD YPEEDGDEEE ERDVENVDSN SLHDGEDGKM
201: ALEEQDNVSH ETEKEDDGDY EDEDEDDDGD EDFTADEDVS LDEEEEEEII ACNKNALKVC KGNKRKRRSG EGRKRRKKCS VAKTRLTRGR KRRVRNTKKG
301: VDEDDDDFVD DCLPARKKAK TKSSRPRPRR RCTVPSDSDV ASSGESDYEY TISEEEREQI REAGSLLKSS VNHASSIRQT TVNKDLPQLR KSPVKKGEKK
401: VELVKRDVIK NVCGICLSEE DMRRLKGTLD CCSHYFCFTC IMEWSKVESR CPLCKQRFRT ISKPARSTPG VDLREVVIPV PERDQVYQPT EEELRSYLDP
501: YENIICTECH QGDDDGLMLL CDLCDSSAHT YCVGLGREVP EGNWYCEGCR PVALGSASSQ THIISEQQRG SGFYSRPSPL VVSGQYQDVS LIVSPRTPFF
601: NGENLFSPRI PNGDAQGSSP SGLGATTLSR RRTLHRHIQN IINGDRLINM GARTGGTSSD GFVTTQIGHG RTIDPSQPVA SQETGISLYA ISEERLPNNN
701: SLISAHDPEL LSPKLDEFGS EEAFRRLSNN TFLGERPIDL GFHHGLAQGD PLVSNQQRLH SHMPNTMSSM AGERLQERVK AHLKNLSSQN DLGQTTFDEI
801: STCSIHTILA ACGLEHESSE VHLVPPPVTC THHHMTPGSS SSSSSGSSLM KGCCYSCFDS FVEDVVKMIL DTRQPHWLSL GLH
Arabidopsis Description
F18C1.6 protein [Source:UniProtKB/TrEMBL;Acc:Q9M9X2]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.